Strain Fitness in Escherichia coli BW25113 around b2342
Experiment: ethyl acetate 5 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | ethyl acetate 5 vol% |
---|---|---|---|---|---|
remove | |||||
2,456,253 | + | yfcX | b2341 | 0.57 | -1.5 |
2,456,253 | + | yfcX | b2341 | 0.57 | -0.2 |
2,456,383 | + | yfcX | b2341 | 0.63 | -0.6 |
2,456,402 | - | yfcX | b2341 | 0.64 | +0.6 |
2,456,425 | + | yfcX | b2341 | 0.65 | -0.8 |
2,456,425 | + | yfcX | b2341 | 0.65 | -0.3 |
2,456,544 | + | yfcX | b2341 | 0.70 | +1.0 |
2,456,614 | + | yfcX | b2341 | 0.74 | -2.2 |
2,456,614 | + | yfcX | b2341 | 0.74 | -0.9 |
2,456,617 | - | yfcX | b2341 | 0.74 | +0.0 |
2,456,617 | - | yfcX | b2341 | 0.74 | +0.3 |
2,456,663 | - | yfcX | b2341 | 0.76 | +0.8 |
2,456,684 | + | yfcX | b2341 | 0.77 | +0.0 |
2,456,747 | + | yfcX | b2341 | 0.80 | +0.1 |
2,456,747 | + | yfcX | b2341 | 0.80 | +0.8 |
2,456,771 | + | yfcX | b2341 | 0.81 | -0.2 |
2,456,771 | + | yfcX | b2341 | 0.81 | +0.0 |
2,457,130 | - | +1.1 | |||
2,457,130 | - | +0.2 | |||
2,457,241 | + | -0.1 | |||
2,457,268 | - | +0.4 | |||
2,457,326 | - | yfcY | b2342 | 0.11 | +1.1 |
2,457,381 | + | yfcY | b2342 | 0.15 | +0.4 |
2,457,473 | + | yfcY | b2342 | 0.22 | -0.2 |
2,457,532 | + | yfcY | b2342 | 0.27 | -3.0 |
2,457,532 | + | yfcY | b2342 | 0.27 | +0.1 |
2,457,535 | - | yfcY | b2342 | 0.27 | +0.0 |
2,457,539 | - | yfcY | b2342 | 0.27 | +0.3 |
2,457,561 | + | yfcY | b2342 | 0.29 | +0.4 |
2,457,636 | - | yfcY | b2342 | 0.35 | +0.2 |
2,457,876 | + | yfcY | b2342 | 0.53 | -1.0 |
2,458,221 | - | yfcY | b2342 | 0.79 | +0.6 |
2,458,233 | - | yfcY | b2342 | 0.80 | +0.7 |
2,458,233 | - | yfcY | b2342 | 0.80 | +0.1 |
2,458,296 | + | yfcY | b2342 | 0.85 | +0.9 |
2,458,452 | + | +1.1 | |||
2,458,470 | - | -0.1 | |||
2,458,496 | - | -0.2 | |||
2,458,654 | + | +0.9 | |||
2,458,859 | - | b2343 | b2343 | 0.66 | +0.1 |
2,458,859 | - | b2343 | b2343 | 0.66 | +0.9 |
2,459,436 | + | -0.6 |
Or see this region's nucleotide sequence