Experiment: Ponti_ML7_MIT diversity barseq
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_10530 and CA264_10535 are separated by 424 nucleotides CA264_10535 and CA264_10540 are separated by 16 nucleotides CA264_10540 and CA264_10545 are separated by 72 nucleotides
CA264_10530: CA264_10530 - hypothetical protein, at 2,440,105 to 2,440,842
_10530
CA264_10535: CA264_10535 - cyclic pyranopterin monophosphate synthase MoaC, at 2,441,267 to 2,441,743
_10535
CA264_10540: CA264_10540 - molybdopterin molybdenumtransferase MoeA, at 2,441,760 to 2,442,968
_10540
CA264_10545: CA264_10545 - GTP 3',8-cyclase MoaA, at 2,443,041 to 2,444,030
_10545
Position (kb)
2441
2442
2443 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2440.855 kb on + strand at 2440.856 kb on - strand at 2440.909 kb on + strand at 2440.909 kb on + strand at 2440.910 kb on - strand at 2441.002 kb on - strand at 2441.118 kb on + strand at 2441.118 kb on + strand at 2441.118 kb on + strand at 2441.122 kb on + strand at 2441.126 kb on + strand at 2441.127 kb on - strand at 2441.181 kb on + strand at 2441.206 kb on + strand at 2441.268 kb on + strand at 2441.268 kb on + strand at 2441.268 kb on + strand at 2441.269 kb on - strand at 2441.269 kb on - strand at 2441.269 kb on - strand at 2441.310 kb on - strand at 2441.362 kb on - strand, within CA264_10535 at 2441.479 kb on + strand, within CA264_10535 at 2441.479 kb on + strand, within CA264_10535 at 2441.690 kb on + strand, within CA264_10535 at 2441.743 kb on + strand at 2441.743 kb on + strand at 2441.743 kb on + strand at 2441.744 kb on - strand at 2441.745 kb on + strand at 2441.745 kb on + strand at 2441.745 kb on + strand at 2441.745 kb on + strand at 2441.746 kb on - strand at 2441.746 kb on - strand at 2441.746 kb on - strand at 2441.746 kb on - strand at 2441.749 kb on + strand at 2441.770 kb on - strand at 2441.778 kb on - strand at 2441.810 kb on + strand at 2441.811 kb on - strand at 2441.811 kb on - strand at 2441.856 kb on + strand at 2441.926 kb on - strand, within CA264_10540 at 2441.928 kb on - strand, within CA264_10540 at 2441.931 kb on + strand, within CA264_10540 at 2441.967 kb on - strand, within CA264_10540 at 2442.044 kb on + strand, within CA264_10540 at 2442.063 kb on + strand, within CA264_10540 at 2442.064 kb on - strand, within CA264_10540 at 2442.209 kb on - strand, within CA264_10540 at 2442.209 kb on - strand, within CA264_10540 at 2442.214 kb on + strand, within CA264_10540 at 2442.215 kb on - strand, within CA264_10540 at 2442.215 kb on - strand, within CA264_10540 at 2442.256 kb on + strand, within CA264_10540 at 2442.257 kb on - strand, within CA264_10540 at 2442.257 kb on - strand, within CA264_10540 at 2442.338 kb on - strand, within CA264_10540 at 2442.338 kb on - strand, within CA264_10540 at 2442.338 kb on - strand, within CA264_10540 at 2442.357 kb on + strand, within CA264_10540 at 2442.364 kb on + strand, within CA264_10540 at 2442.364 kb on + strand, within CA264_10540 at 2442.365 kb on - strand, within CA264_10540 at 2442.365 kb on - strand, within CA264_10540 at 2442.497 kb on + strand, within CA264_10540 at 2442.502 kb on - strand, within CA264_10540 at 2442.518 kb on + strand, within CA264_10540 at 2442.721 kb on - strand, within CA264_10540 at 2442.832 kb on + strand, within CA264_10540 at 2442.975 kb on - strand at 2443.011 kb on + strand at 2443.011 kb on + strand at 2443.019 kb on - strand at 2443.288 kb on + strand, within CA264_10545 at 2443.296 kb on + strand, within CA264_10545 at 2443.305 kb on + strand, within CA264_10545 at 2443.306 kb on - strand, within CA264_10545 at 2443.306 kb on - strand, within CA264_10545 at 2443.329 kb on - strand, within CA264_10545 at 2443.439 kb on + strand, within CA264_10545 at 2443.559 kb on + strand, within CA264_10545 at 2443.559 kb on + strand, within CA264_10545 at 2443.559 kb on + strand, within CA264_10545 at 2443.560 kb on - strand, within CA264_10545 at 2443.756 kb on - strand, within CA264_10545 at 2443.838 kb on + strand, within CA264_10545 at 2443.838 kb on + strand, within CA264_10545 at 2443.838 kb on + strand, within CA264_10545 at 2443.842 kb on + strand, within CA264_10545 at 2443.897 kb on + strand, within CA264_10545 at 2443.946 kb on + strand at 2443.946 kb on + strand at 2443.947 kb on - strand at 2443.951 kb on + strand at 2443.951 kb on + strand at 2443.951 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Ponti_ML7_MIT diversity barseq remove 2,440,855 + -0.5 2,440,856 - -0.2 2,440,909 + +0.1 2,440,909 + +0.0 2,440,910 - +3.4 2,441,002 - -0.6 2,441,118 + -2.2 2,441,118 + -0.8 2,441,118 + -0.0 2,441,122 + -0.0 2,441,126 + -0.6 2,441,127 - -1.5 2,441,181 + -0.5 2,441,206 + -1.6 2,441,268 + -0.3 2,441,268 + -0.6 2,441,268 + +0.6 2,441,269 - -0.0 2,441,269 - -1.0 2,441,269 - -0.8 2,441,310 - -0.2 2,441,362 - CA264_10535 0.20 +0.0 2,441,479 + CA264_10535 0.44 -0.3 2,441,479 + CA264_10535 0.44 +0.7 2,441,690 + CA264_10535 0.89 +0.2 2,441,743 + -0.5 2,441,743 + -1.0 2,441,743 + +0.0 2,441,744 - -0.0 2,441,745 + -0.5 2,441,745 + +0.6 2,441,745 + -0.4 2,441,745 + -0.3 2,441,746 - -0.4 2,441,746 - -1.2 2,441,746 - +1.0 2,441,746 - -0.6 2,441,749 + +0.3 2,441,770 - +0.3 2,441,778 - -0.3 2,441,810 + -0.8 2,441,811 - -0.1 2,441,811 - -0.6 2,441,856 + -0.6 2,441,926 - CA264_10540 0.14 -0.1 2,441,928 - CA264_10540 0.14 +0.3 2,441,931 + CA264_10540 0.14 +0.4 2,441,967 - CA264_10540 0.17 -0.0 2,442,044 + CA264_10540 0.23 -0.3 2,442,063 + CA264_10540 0.25 -1.2 2,442,064 - CA264_10540 0.25 +1.6 2,442,209 - CA264_10540 0.37 +0.2 2,442,209 - CA264_10540 0.37 -0.0 2,442,214 + CA264_10540 0.38 -0.6 2,442,215 - CA264_10540 0.38 -0.1 2,442,215 - CA264_10540 0.38 +0.3 2,442,256 + CA264_10540 0.41 +0.3 2,442,257 - CA264_10540 0.41 +0.8 2,442,257 - CA264_10540 0.41 +1.4 2,442,338 - CA264_10540 0.48 +0.1 2,442,338 - CA264_10540 0.48 -2.2 2,442,338 - CA264_10540 0.48 +0.8 2,442,357 + CA264_10540 0.49 +0.3 2,442,364 + CA264_10540 0.50 -0.3 2,442,364 + CA264_10540 0.50 +0.1 2,442,365 - CA264_10540 0.50 +0.1 2,442,365 - CA264_10540 0.50 +1.4 2,442,497 + CA264_10540 0.61 -0.8 2,442,502 - CA264_10540 0.61 -1.1 2,442,518 + CA264_10540 0.63 -0.3 2,442,721 - CA264_10540 0.79 +1.4 2,442,832 + CA264_10540 0.89 -0.7 2,442,975 - -0.7 2,443,011 + -0.1 2,443,011 + +0.6 2,443,019 - +0.2 2,443,288 + CA264_10545 0.25 -0.2 2,443,296 + CA264_10545 0.26 -1.2 2,443,305 + CA264_10545 0.27 -0.4 2,443,306 - CA264_10545 0.27 -0.1 2,443,306 - CA264_10545 0.27 -0.7 2,443,329 - CA264_10545 0.29 -0.6 2,443,439 + CA264_10545 0.40 +0.8 2,443,559 + CA264_10545 0.52 -1.2 2,443,559 + CA264_10545 0.52 -0.6 2,443,559 + CA264_10545 0.52 +0.3 2,443,560 - CA264_10545 0.52 -1.6 2,443,756 - CA264_10545 0.72 -0.9 2,443,838 + CA264_10545 0.81 +0.8 2,443,838 + CA264_10545 0.81 -0.6 2,443,838 + CA264_10545 0.81 -0.1 2,443,842 + CA264_10545 0.81 -0.1 2,443,897 + CA264_10545 0.86 -0.3 2,443,946 + -0.7 2,443,946 + +0.6 2,443,947 - +0.1 2,443,951 + -0.5 2,443,951 + +0.4 2,443,951 + -0.2
Or see this region's nucleotide sequence