Experiment: LB_plus_SM_buffer with FelixO1_phage (wt new) 0.0075 MOI
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3192 and GFF3193 are separated by 3 nucleotides GFF3193 and GFF3194 are separated by 144 nucleotides GFF3194 and GFF3195 are separated by 41 nucleotides GFF3195 and GFF3196 are separated by 2 nucleotides
GFF3192 - DedA family inner membrane protein YqjA, at 200,329 to 200,991
GFF3192
GFF3193 - Uncharacterized protein YqjB, at 200,995 to 201,378
GFF3193
GFF3194 - Periplasmic protein YqjC, at 201,523 to 201,891
GFF3194
GFF3195 - Uncharacterized membrane protein YqjD, at 201,933 to 202,238
GFF3195
GFF3196 - Inner membrane protein YqjE, at 202,241 to 202,639
GFF3196
Position (kb) 200
201
202 Strain fitness (log2 ratio) -1
0
1 at 199.999 kb on + strand at 199.999 kb on + strand at 199.999 kb on + strand at 200.000 kb on - strand at 200.000 kb on - strand at 200.000 kb on - strand at 200.002 kb on - strand at 200.005 kb on + strand at 200.005 kb on + strand at 200.042 kb on + strand at 200.191 kb on + strand at 200.192 kb on - strand at 200.323 kb on + strand at 200.323 kb on + strand at 200.337 kb on - strand at 200.412 kb on - strand, within GFF3192 at 200.414 kb on - strand, within GFF3192 at 200.424 kb on - strand, within GFF3192 at 200.656 kb on + strand, within GFF3192 at 200.657 kb on - strand, within GFF3192 at 200.872 kb on - strand, within GFF3192 at 200.878 kb on + strand, within GFF3192 at 200.878 kb on + strand, within GFF3192 at 200.892 kb on - strand, within GFF3192 at 200.995 kb on - strand at 201.047 kb on + strand, within GFF3193 at 201.201 kb on + strand, within GFF3193 at 201.284 kb on + strand, within GFF3193 at 201.296 kb on - strand, within GFF3193 at 201.439 kb on + strand at 201.443 kb on - strand at 201.443 kb on - strand at 201.565 kb on - strand, within GFF3194 at 201.578 kb on - strand, within GFF3194 at 201.583 kb on - strand, within GFF3194 at 201.583 kb on - strand, within GFF3194 at 201.614 kb on + strand, within GFF3194 at 201.614 kb on + strand, within GFF3194 at 201.627 kb on + strand, within GFF3194 at 201.837 kb on + strand, within GFF3194 at 202.155 kb on + strand, within GFF3195 at 202.220 kb on - strand at 202.350 kb on + strand, within GFF3196
Per-strain Table
Position Strand Gene LocusTag Fraction LB_plus_SM_buffer with FelixO1_phage (wt new) 0.0075 MOI remove 199,999 + -0.1 199,999 + -0.7 199,999 + +0.2 200,000 - -0.2 200,000 - +0.0 200,000 - +0.1 200,002 - -0.6 200,005 + -0.1 200,005 + -0.7 200,042 + -0.4 200,191 + +0.2 200,192 - -0.8 200,323 + -1.2 200,323 + +0.3 200,337 - +0.5 200,412 - GFF3192 0.13 -0.3 200,414 - GFF3192 0.13 -0.6 200,424 - GFF3192 0.14 -0.5 200,656 + GFF3192 0.49 -0.9 200,657 - GFF3192 0.49 -0.4 200,872 - GFF3192 0.82 -0.9 200,878 + GFF3192 0.83 -0.6 200,878 + GFF3192 0.83 -0.6 200,892 - GFF3192 0.85 -0.9 200,995 - +0.5 201,047 + GFF3193 0.14 +0.8 201,201 + GFF3193 0.54 -0.0 201,284 + GFF3193 0.75 +0.7 201,296 - GFF3193 0.78 +0.4 201,439 + +0.3 201,443 - -0.3 201,443 - +0.3 201,565 - GFF3194 0.11 +0.0 201,578 - GFF3194 0.15 +0.2 201,583 - GFF3194 0.16 +0.5 201,583 - GFF3194 0.16 +0.3 201,614 + GFF3194 0.25 +0.1 201,614 + GFF3194 0.25 +0.0 201,627 + GFF3194 0.28 +0.3 201,837 + GFF3194 0.85 -0.6 202,155 + GFF3195 0.73 -0.1 202,220 - -0.6 202,350 + GFF3196 0.27 -0.2
Or see this region's nucleotide sequence