Strain Fitness in Escherichia coli BW25113 around b2166

Experiment: toluene 2.5 vol%

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntyeiN and yeiC overlap by 13 nucleotidesyeiC and fruA are separated by 422 nucleotides b2165: yeiN - hypothetical protein (NCBI), at 2,255,451 to 2,256,389 yeiN b2166: yeiC - predicted kinase (NCBI), at 2,256,377 to 2,257,318 yeiC b2167: fruA - fused fructose-specific PTS enzymes: IIBcomponent/IIC components (NCBI), at 2,257,741 to 2,259,432 fruA Position (kb) 2256 2257 2258Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2255.434 kb on + strandat 2255.474 kb on - strandat 2255.639 kb on + strand, within yeiNat 2255.688 kb on + strand, within yeiNat 2255.702 kb on - strand, within yeiNat 2255.777 kb on + strand, within yeiNat 2255.805 kb on + strand, within yeiNat 2255.831 kb on - strand, within yeiNat 2255.833 kb on + strand, within yeiNat 2255.833 kb on + strand, within yeiNat 2255.935 kb on + strand, within yeiNat 2255.936 kb on + strand, within yeiNat 2255.936 kb on + strand, within yeiNat 2255.961 kb on + strand, within yeiNat 2255.966 kb on + strand, within yeiNat 2255.974 kb on - strand, within yeiNat 2255.974 kb on - strand, within yeiNat 2255.979 kb on - strand, within yeiNat 2256.048 kb on + strand, within yeiNat 2256.048 kb on + strand, within yeiNat 2256.051 kb on - strand, within yeiNat 2256.051 kb on - strand, within yeiNat 2256.098 kb on - strand, within yeiNat 2256.120 kb on + strand, within yeiNat 2256.120 kb on + strand, within yeiNat 2256.128 kb on + strand, within yeiNat 2256.135 kb on - strand, within yeiNat 2256.136 kb on - strand, within yeiNat 2256.456 kb on - strandat 2256.456 kb on - strandat 2256.456 kb on - strandat 2256.456 kb on - strandat 2256.458 kb on - strandat 2256.471 kb on - strandat 2256.477 kb on - strand, within yeiCat 2256.477 kb on - strand, within yeiCat 2256.514 kb on - strand, within yeiCat 2256.522 kb on - strand, within yeiCat 2256.522 kb on - strand, within yeiCat 2256.522 kb on - strand, within yeiCat 2256.529 kb on + strand, within yeiCat 2256.532 kb on - strand, within yeiCat 2256.532 kb on - strand, within yeiCat 2256.542 kb on - strand, within yeiCat 2256.542 kb on - strand, within yeiCat 2256.542 kb on - strand, within yeiCat 2256.542 kb on - strand, within yeiCat 2256.548 kb on + strand, within yeiCat 2256.556 kb on - strand, within yeiCat 2256.559 kb on + strand, within yeiCat 2256.592 kb on + strand, within yeiCat 2256.603 kb on - strand, within yeiCat 2256.605 kb on - strand, within yeiCat 2256.606 kb on + strand, within yeiCat 2256.606 kb on + strand, within yeiCat 2256.607 kb on + strand, within yeiCat 2256.607 kb on + strand, within yeiCat 2256.650 kb on + strand, within yeiCat 2256.650 kb on + strand, within yeiCat 2256.658 kb on - strand, within yeiCat 2256.665 kb on + strand, within yeiCat 2256.665 kb on + strand, within yeiCat 2256.745 kb on - strand, within yeiCat 2256.762 kb on + strand, within yeiCat 2256.769 kb on - strand, within yeiCat 2256.782 kb on + strand, within yeiCat 2256.791 kb on + strand, within yeiCat 2256.809 kb on + strand, within yeiCat 2256.838 kb on + strand, within yeiCat 2256.843 kb on + strand, within yeiCat 2256.858 kb on + strand, within yeiCat 2256.869 kb on + strand, within yeiCat 2256.888 kb on + strand, within yeiCat 2256.888 kb on + strand, within yeiCat 2256.920 kb on - strand, within yeiCat 2256.937 kb on + strand, within yeiCat 2257.064 kb on - strand, within yeiCat 2257.105 kb on - strand, within yeiCat 2257.105 kb on - strand, within yeiCat 2257.109 kb on - strand, within yeiCat 2257.121 kb on - strand, within yeiCat 2257.165 kb on - strand, within yeiCat 2257.182 kb on + strand, within yeiCat 2257.182 kb on + strand, within yeiCat 2257.200 kb on - strand, within yeiCat 2257.200 kb on - strand, within yeiCat 2257.200 kb on - strand, within yeiCat 2257.309 kb on - strandat 2257.333 kb on - strandat 2257.333 kb on - strandat 2257.368 kb on - strandat 2257.368 kb on - strandat 2257.402 kb on - strandat 2257.413 kb on - strandat 2257.414 kb on + strandat 2257.428 kb on - strandat 2257.433 kb on - strandat 2257.433 kb on - strandat 2257.481 kb on - strandat 2257.483 kb on + strandat 2257.549 kb on - strandat 2257.549 kb on - strandat 2257.549 kb on - strandat 2257.554 kb on - strandat 2257.591 kb on - strandat 2257.597 kb on - strandat 2257.597 kb on - strandat 2257.633 kb on + strandat 2257.734 kb on - strandat 2257.748 kb on + strandat 2257.748 kb on + strandat 2257.795 kb on - strandat 2257.832 kb on + strandat 2257.893 kb on - strandat 2257.901 kb on - strandat 2257.965 kb on - strand, within fruAat 2257.970 kb on - strand, within fruAat 2257.970 kb on - strand, within fruAat 2258.157 kb on + strand, within fruAat 2258.157 kb on + strand, within fruAat 2258.170 kb on - strand, within fruAat 2258.220 kb on - strand, within fruAat 2258.220 kb on - strand, within fruA

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction toluene 2.5 vol%
remove
2,255,434 + +0.1
2,255,474 - +1.2
2,255,639 + yeiN b2165 0.20 -2.6
2,255,688 + yeiN b2165 0.25 -2.3
2,255,702 - yeiN b2165 0.27 +0.6
2,255,777 + yeiN b2165 0.35 +0.4
2,255,805 + yeiN b2165 0.38 +1.0
2,255,831 - yeiN b2165 0.40 +0.2
2,255,833 + yeiN b2165 0.41 -1.7
2,255,833 + yeiN b2165 0.41 +1.1
2,255,935 + yeiN b2165 0.52 -0.6
2,255,936 + yeiN b2165 0.52 +0.5
2,255,936 + yeiN b2165 0.52 -1.0
2,255,961 + yeiN b2165 0.54 +1.2
2,255,966 + yeiN b2165 0.55 +0.5
2,255,974 - yeiN b2165 0.56 -0.2
2,255,974 - yeiN b2165 0.56 +0.2
2,255,979 - yeiN b2165 0.56 -1.1
2,256,048 + yeiN b2165 0.64 -1.0
2,256,048 + yeiN b2165 0.64 +0.2
2,256,051 - yeiN b2165 0.64 +1.3
2,256,051 - yeiN b2165 0.64 +0.5
2,256,098 - yeiN b2165 0.69 +0.7
2,256,120 + yeiN b2165 0.71 -1.6
2,256,120 + yeiN b2165 0.71 -0.0
2,256,128 + yeiN b2165 0.72 +0.1
2,256,135 - yeiN b2165 0.73 -0.1
2,256,136 - yeiN b2165 0.73 -0.0
2,256,456 - +0.6
2,256,456 - +1.4
2,256,456 - +1.1
2,256,456 - -0.3
2,256,458 - +0.5
2,256,471 - -0.4
2,256,477 - yeiC b2166 0.11 +1.9
2,256,477 - yeiC b2166 0.11 +0.4
2,256,514 - yeiC b2166 0.15 -1.8
2,256,522 - yeiC b2166 0.15 +0.6
2,256,522 - yeiC b2166 0.15 -0.9
2,256,522 - yeiC b2166 0.15 +0.4
2,256,529 + yeiC b2166 0.16 +0.0
2,256,532 - yeiC b2166 0.16 -2.3
2,256,532 - yeiC b2166 0.16 -3.3
2,256,542 - yeiC b2166 0.18 +0.4
2,256,542 - yeiC b2166 0.18 -1.6
2,256,542 - yeiC b2166 0.18 -0.7
2,256,542 - yeiC b2166 0.18 -1.0
2,256,548 + yeiC b2166 0.18 -0.1
2,256,556 - yeiC b2166 0.19 +2.2
2,256,559 + yeiC b2166 0.19 -0.6
2,256,592 + yeiC b2166 0.23 +0.1
2,256,603 - yeiC b2166 0.24 -0.6
2,256,605 - yeiC b2166 0.24 +0.8
2,256,606 + yeiC b2166 0.24 -0.9
2,256,606 + yeiC b2166 0.24 +0.9
2,256,607 + yeiC b2166 0.24 +1.6
2,256,607 + yeiC b2166 0.24 +0.1
2,256,650 + yeiC b2166 0.29 -1.8
2,256,650 + yeiC b2166 0.29 +0.6
2,256,658 - yeiC b2166 0.30 +0.1
2,256,665 + yeiC b2166 0.31 +0.4
2,256,665 + yeiC b2166 0.31 -0.0
2,256,745 - yeiC b2166 0.39 -0.8
2,256,762 + yeiC b2166 0.41 -0.4
2,256,769 - yeiC b2166 0.42 -0.5
2,256,782 + yeiC b2166 0.43 +0.1
2,256,791 + yeiC b2166 0.44 -0.4
2,256,809 + yeiC b2166 0.46 +1.9
2,256,838 + yeiC b2166 0.49 -0.1
2,256,843 + yeiC b2166 0.49 -0.7
2,256,858 + yeiC b2166 0.51 +0.9
2,256,869 + yeiC b2166 0.52 +0.1
2,256,888 + yeiC b2166 0.54 -0.0
2,256,888 + yeiC b2166 0.54 +0.1
2,256,920 - yeiC b2166 0.58 -0.9
2,256,937 + yeiC b2166 0.59 +0.3
2,257,064 - yeiC b2166 0.73 -0.3
2,257,105 - yeiC b2166 0.77 -3.2
2,257,105 - yeiC b2166 0.77 +0.7
2,257,109 - yeiC b2166 0.78 +1.7
2,257,121 - yeiC b2166 0.79 +1.3
2,257,165 - yeiC b2166 0.84 +0.1
2,257,182 + yeiC b2166 0.85 -0.0
2,257,182 + yeiC b2166 0.85 -1.0
2,257,200 - yeiC b2166 0.87 +0.2
2,257,200 - yeiC b2166 0.87 -0.5
2,257,200 - yeiC b2166 0.87 -0.3
2,257,309 - -1.6
2,257,333 - +1.0
2,257,333 - +1.1
2,257,368 - -0.1
2,257,368 - -1.2
2,257,402 - -0.3
2,257,413 - -2.0
2,257,414 + -1.1
2,257,428 - -0.2
2,257,433 - +0.1
2,257,433 - -2.0
2,257,481 - +0.1
2,257,483 + -0.0
2,257,549 - -0.8
2,257,549 - -0.8
2,257,549 - +0.1
2,257,554 - +0.4
2,257,591 - +1.6
2,257,597 - -2.5
2,257,597 - +0.1
2,257,633 + -0.1
2,257,734 - +0.3
2,257,748 + +0.1
2,257,748 + -2.1
2,257,795 - -0.6
2,257,832 + -0.9
2,257,893 - -0.2
2,257,901 - -0.9
2,257,965 - fruA b2167 0.13 -1.2
2,257,970 - fruA b2167 0.14 +0.5
2,257,970 - fruA b2167 0.14 -0.8
2,258,157 + fruA b2167 0.25 -1.4
2,258,157 + fruA b2167 0.25 -1.3
2,258,170 - fruA b2167 0.25 +0.4
2,258,220 - fruA b2167 0.28 -0.4
2,258,220 - fruA b2167 0.28 -1.6

Or see this region's nucleotide sequence