Experiment: LB_plus_SM_buffer with FelixO1_phage (wt new) 0.075 MOI
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3154 and GFF3155 are separated by 66 nucleotides GFF3155 and GFF3156 are separated by 399 nucleotides GFF3156 and GFF3157 are separated by 35 nucleotides GFF3157 and GFF3158 are separated by 19 nucleotides
GFF3154 - Zinc transporter ZupT, at 158,221 to 158,994
GFF3154
GFF3155 - FIG01045594: hypothetical protein, at 159,061 to 159,237
GFF3155
GFF3156 - Putative arylsulfate sulfotransferase (EC 2.8.2.22), at 159,637 to 160,602
GFF3156
GFF3157 - Putative arylsulfate sulfotransferase (EC 2.8.2.22), at 160,638 to 161,432
GFF3157
GFF3158 - Periplasmic thiol:disulfide interchange protein, DsbA-like, at 161,452 to 162,123
GFF3158
Position (kb) 159
160
161 Strain fitness (log2 ratio) -1
0
1 at 158.667 kb on + strand, within GFF3154 at 158.829 kb on + strand, within GFF3154 at 158.913 kb on + strand, within GFF3154 at 158.923 kb on + strand at 158.940 kb on + strand at 159.131 kb on - strand, within GFF3155 at 159.212 kb on - strand, within GFF3155 at 159.845 kb on + strand, within GFF3156 at 159.881 kb on - strand, within GFF3156 at 159.919 kb on - strand, within GFF3156 at 160.003 kb on + strand, within GFF3156 at 160.038 kb on + strand, within GFF3156 at 160.297 kb on - strand, within GFF3156 at 160.546 kb on + strand at 160.547 kb on - strand at 160.556 kb on + strand at 160.557 kb on - strand at 160.560 kb on - strand at 160.586 kb on + strand at 160.678 kb on + strand at 160.773 kb on - strand, within GFF3157 at 160.800 kb on + strand, within GFF3157 at 160.801 kb on - strand, within GFF3157 at 160.898 kb on + strand, within GFF3157 at 160.911 kb on - strand, within GFF3157 at 160.955 kb on + strand, within GFF3157 at 161.135 kb on + strand, within GFF3157 at 161.197 kb on - strand, within GFF3157 at 161.208 kb on - strand, within GFF3157 at 161.214 kb on - strand, within GFF3157 at 161.217 kb on - strand, within GFF3157 at 161.274 kb on - strand, within GFF3157 at 161.477 kb on + strand at 161.586 kb on + strand, within GFF3158
Per-strain Table
Position Strand Gene LocusTag Fraction LB_plus_SM_buffer with FelixO1_phage (wt new) 0.075 MOI remove 158,667 + GFF3154 0.58 -0.4 158,829 + GFF3154 0.79 +0.0 158,913 + GFF3154 0.89 +0.3 158,923 + -0.4 158,940 + +1.0 159,131 - GFF3155 0.40 +0.8 159,212 - GFF3155 0.85 +0.0 159,845 + GFF3156 0.22 +0.1 159,881 - GFF3156 0.25 +0.5 159,919 - GFF3156 0.29 +0.3 160,003 + GFF3156 0.38 +0.0 160,038 + GFF3156 0.42 -1.2 160,297 - GFF3156 0.68 -0.7 160,546 + +0.6 160,547 - +0.3 160,556 + -0.1 160,557 - +0.1 160,560 - +0.2 160,586 + -0.2 160,678 + +0.3 160,773 - GFF3157 0.17 +0.4 160,800 + GFF3157 0.20 +0.2 160,801 - GFF3157 0.21 +0.6 160,898 + GFF3157 0.33 +0.0 160,911 - GFF3157 0.34 -1.2 160,955 + GFF3157 0.40 +0.3 161,135 + GFF3157 0.63 -0.4 161,197 - GFF3157 0.70 -0.1 161,208 - GFF3157 0.72 -1.1 161,214 - GFF3157 0.72 -0.1 161,217 - GFF3157 0.73 -1.0 161,274 - GFF3157 0.80 -1.2 161,477 + +0.3 161,586 + GFF3158 0.20 +0.3
Or see this region's nucleotide sequence