Strain Fitness in Agrobacterium fabrum C58 around Atu8174

Experiment: R2A with silver chloride 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with silver chloride 5 mM
2,187,261	+				+0.0
2,187,306	-				+0.2
2,187,307	-				-0.4
2,187,375	-				-0.5
2,187,375	-				+0.5
2,187,380	+				+0.3
2,187,388	-				-0.4
2,187,435	+				+0.8
2,187,504	+				-1.2
2,187,696	+		Atu8174	0.21	-0.2
2,187,699	-		Atu8174	0.21	-0.0
2,188,166	+		Atu8174	0.77	-0.7
2,188,229	-		Atu8174	0.84	-0.2
2,188,229	-		Atu8174	0.84	-1.2
2,188,277	+		Atu8174	0.90	-0.3
2,188,312	+				-1.0
2,188,441	+				-0.2
2,188,593	-		Atu2220	0.16	-1.1
2,188,757	+		Atu2220	0.27	-0.2
2,188,758	+		Atu2220	0.27	+0.4
2,188,808	-		Atu2220	0.31	+0.8
2,188,913	-		Atu2220	0.38	+0.3
2,189,130	-		Atu2220	0.52	+0.3
2,189,176	-		Atu2220	0.55	-3.1
2,189,335	+		Atu2220	0.66	+0.7
2,189,358	-		Atu2220	0.67	+0.4