Strain Fitness in Agrobacterium fabrum C58 around Atu4853

Experiment: R2A with silver chloride 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with silver chloride 5 mM
2,033,626	+				-0.1
2,033,634	-				-1.2
2,033,641	+				-2.9
2,033,788	-		Atu4852	0.22	-1.6
2,033,816	-		Atu4852	0.27	-0.1
2,033,824	-		Atu4852	0.29	-0.7
2,033,848	-		Atu4852	0.33	-1.3
2,033,848	-		Atu4852	0.33	+0.2
2,033,863	+		Atu4852	0.36	-0.9
2,033,868	+		Atu4852	0.37	+0.4
2,033,908	+		Atu4852	0.44	-0.5
2,034,255	-				+0.2
2,034,262	+				-0.9
2,034,270	-				-1.4
2,034,270	-				-0.1
2,034,293	-				-2.2
2,034,345	-				+0.3
2,034,350	-				+1.1
2,034,355	+				-0.9
2,034,432	-				-1.7
2,034,437	+				-0.1
2,034,437	+				-2.0
2,034,437	+				-0.5
2,034,445	-		Atu4853	0.11	-0.5
2,034,453	-		Atu4853	0.13	-0.9
2,034,483	+		Atu4853	0.18	-1.5
2,034,492	-		Atu4853	0.19	-0.4
2,034,569	-		Atu4853	0.32	-1.4
2,034,632	+		Atu4853	0.43	-1.2
2,034,651	+		Atu4853	0.46	-2.4
2,034,789	-		Atu4853	0.70	-0.5
2,034,837	+		Atu4853	0.78	+0.3
2,034,887	-		Atu4853	0.86	-0.3
2,034,916	-				-0.4
2,034,938	+				-1.5
2,034,940	-				-0.8
2,034,956	+				-0.5
2,034,964	-				-0.5
2,034,964	-				-0.5
2,035,122	-				-0.9
2,035,146	-				-0.4
2,035,168	+				-0.8
2,035,171	+				-0.8
2,035,179	-				-0.3
2,035,319	-				-0.8
2,035,355	-				-1.6
2,035,528	-				-0.8
2,035,537	+				-2.3
2,035,569	+				-0.2
2,035,569	+				-0.1
2,035,632	+		Atu4854	0.24	-0.3
2,035,632	+		Atu4854	0.24	-1.0
2,035,645	-		Atu4854	0.30	-0.8
2,035,705	+		Atu4854	0.59	-0.1
2,035,713	-		Atu4854	0.63	-1.1
2,035,724	+		Atu4854	0.69	-0.5
2,035,724	+		Atu4854	0.69	+0.4
2,035,732	-		Atu4854	0.73	-2.7
2,035,772	-				+1.2
2,035,788	-				-0.6
2,035,790	-				-0.5
2,035,792	+				-0.5
2,035,813	-				-1.1
2,035,820	+				-0.4
2,035,828	-				-2.7
2,035,829	+				-0.9
2,035,862	+				-1.6
2,035,882	-				+0.6
2,035,948	-				-0.9
2,035,951	+				-0.4
2,035,961	-				-0.3