Strain Fitness in Agrobacterium fabrum C58 around Atu4845

Experiment: R2A with silver chloride 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with silver chloride 5 mM
2,024,381	+				+2.2
2,024,461	+		Atu4844	0.15	-0.5
2,024,461	+		Atu4844	0.15	+0.4
2,024,461	+		Atu4844	0.15	+0.3
2,024,508	+		Atu4844	0.20	-0.1
2,024,508	+		Atu4844	0.20	-0.5
2,024,528	+		Atu4844	0.22	+0.1
2,024,536	-		Atu4844	0.23	-0.5
2,024,536	-		Atu4844	0.23	+0.6
2,024,584	-		Atu4844	0.28	-0.2
2,024,683	+		Atu4844	0.38	-0.8
2,024,683	+		Atu4844	0.38	-0.0
2,024,691	-		Atu4844	0.39	-1.9
2,024,754	-		Atu4844	0.45	+0.0
2,024,781	-		Atu4844	0.48	-0.1
2,024,842	+		Atu4844	0.54	-0.5
2,024,850	-		Atu4844	0.55	-0.6
2,024,879	-		Atu4844	0.58	-0.6
2,024,909	-		Atu4844	0.61	-0.9
2,024,945	+		Atu4844	0.65	-0.7
2,025,004	+		Atu4844	0.71	+0.2
2,025,090	+		Atu4844	0.80	-1.0
2,025,197	+				-1.0
2,025,202	+				-0.9
2,025,202	+				-0.6
2,025,356	-				+1.2
2,025,598	+		Atu4845	0.30	-0.6
2,025,600	+		Atu4845	0.30	-0.6
2,025,606	-		Atu4845	0.30	-0.2
2,025,619	+		Atu4845	0.32	-0.8
2,025,619	+		Atu4845	0.32	-0.7
2,025,625	-		Atu4845	0.32	-1.6
2,025,627	-		Atu4845	0.33	-0.9
2,025,627	-		Atu4845	0.33	-0.3
2,025,641	+		Atu4845	0.34	-0.7
2,025,721	+		Atu4845	0.42	-1.0
2,025,737	+		Atu4845	0.44	-1.1
2,025,737	+		Atu4845	0.44	-0.7
2,025,740	-		Atu4845	0.44	-0.6
2,025,745	-		Atu4845	0.44	-0.7
2,025,750	-		Atu4845	0.45	-0.2
2,025,761	-		Atu4845	0.46	-0.9
2,025,763	+		Atu4845	0.46	-1.0
2,025,821	-		Atu4845	0.52	-1.4
2,025,869	+		Atu4845	0.57	-0.7
2,025,897	+		Atu4845	0.60	-0.0
2,025,918	+		Atu4845	0.62	-0.8
2,025,920	-		Atu4845	0.62	-0.8
2,025,920	-		Atu4845	0.62	-0.9
2,025,948	+		Atu4845	0.65	-0.8
2,025,950	+		Atu4845	0.65	+0.2
2,026,048	+		Atu4845	0.75	-0.6
2,026,105	-		Atu4845	0.80	-1.2
2,026,181	+		Atu4845	0.88	+0.6
2,026,378	+				-0.5
2,026,378	+				-0.7
2,026,494	-		Atu4846	0.17	-0.8
2,026,501	+		Atu4846	0.18	-1.0
2,026,501	+		Atu4846	0.18	+0.2
2,026,509	-		Atu4846	0.19	-0.1
2,026,513	-		Atu4846	0.19	-0.9
2,026,622	+		Atu4846	0.29	-0.3
2,026,625	-		Atu4846	0.30	-0.1
2,026,820	-		Atu4846	0.48	-0.3
2,026,829	+		Atu4846	0.48	-1.7
2,026,848	+		Atu4846	0.50	+0.2
2,026,911	+		Atu4846	0.56	-0.4
2,026,913	+		Atu4846	0.56	-0.8
2,026,929	-		Atu4846	0.58	-1.2
2,027,012	+		Atu4846	0.65	+0.6
2,027,012	+		Atu4846	0.65	-0.5
2,027,058	+		Atu4846	0.70	-0.4
2,027,103	-		Atu4846	0.74	-0.4
2,027,126	+		Atu4846	0.76	-1.2
2,027,126	+		Atu4846	0.76	-1.0
2,027,134	-		Atu4846	0.77	-0.2
2,027,141	-		Atu4846	0.77	-0.3
2,027,141	-		Atu4846	0.77	-0.8
2,027,152	+		Atu4846	0.78	-0.6
2,027,168	-		Atu4846	0.80	+0.2
2,027,171	+		Atu4846	0.80	-1.8
2,027,171	+		Atu4846	0.80	-1.1
2,027,171	+		Atu4846	0.80	-0.3
2,027,171	+		Atu4846	0.80	-0.1
2,027,179	-		Atu4846	0.81	-0.9
2,027,179	-		Atu4846	0.81	-0.7
2,027,179	-		Atu4846	0.81	-0.2
2,027,179	-		Atu4846	0.81	-0.1
2,027,179	-		Atu4846	0.81	-1.4
2,027,179	-		Atu4846	0.81	-0.9
2,027,179	-		Atu4846	0.81	-1.2
2,027,185	+		Atu4846	0.81	+0.2
2,027,185	+		Atu4846	0.81	+0.1
2,027,193	-		Atu4846	0.82	-1.5
2,027,271	+		Atu4846	0.89	-0.3