Strain Fitness in Escherichia coli BW25113 around b1312
Experiment: toluene 2.5 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | toluene 2.5 vol% |
---|---|---|---|---|---|
remove | |||||
1,371,153 | + | -0.3 | |||
1,371,153 | + | +0.3 | |||
1,371,161 | - | -0.1 | |||
1,371,285 | + | +1.1 | |||
1,371,323 | - | +0.7 | |||
1,371,474 | + | ycjO | b1311 | 0.26 | +0.7 |
1,371,474 | + | ycjO | b1311 | 0.26 | -0.0 |
1,371,508 | - | ycjO | b1311 | 0.30 | -2.2 |
1,371,587 | + | ycjO | b1311 | 0.39 | -0.7 |
1,371,597 | + | ycjO | b1311 | 0.40 | +0.3 |
1,371,652 | - | ycjO | b1311 | 0.46 | -0.3 |
1,371,665 | - | ycjO | b1311 | 0.48 | +1.4 |
1,371,738 | - | ycjO | b1311 | 0.56 | +0.4 |
1,371,738 | - | ycjO | b1311 | 0.56 | +1.0 |
1,371,778 | - | ycjO | b1311 | 0.60 | +1.4 |
1,371,778 | - | ycjO | b1311 | 0.60 | +0.2 |
1,371,938 | - | ycjO | b1311 | 0.78 | +0.2 |
1,371,991 | + | ycjO | b1311 | 0.84 | +0.1 |
1,372,224 | - | ycjP | b1312 | 0.13 | -0.1 |
1,372,462 | + | ycjP | b1312 | 0.41 | -1.3 |
1,372,470 | - | ycjP | b1312 | 0.42 | +0.1 |
1,372,470 | - | ycjP | b1312 | 0.42 | -0.7 |
1,372,546 | + | ycjP | b1312 | 0.51 | -0.1 |
1,372,564 | - | ycjP | b1312 | 0.53 | -0.6 |
1,372,564 | - | ycjP | b1312 | 0.53 | -0.1 |
1,372,661 | - | ycjP | b1312 | 0.65 | -0.5 |
1,372,673 | - | ycjP | b1312 | 0.66 | -1.2 |
1,372,673 | - | ycjP | b1312 | 0.66 | +0.5 |
1,372,684 | + | ycjP | b1312 | 0.68 | -1.3 |
1,372,850 | + | ycjP | b1312 | 0.87 | -1.2 |
1,373,016 | - | +0.5 | |||
1,373,021 | - | +0.3 | |||
1,373,031 | - | -1.2 | |||
1,373,058 | - | +0.5 | |||
1,373,110 | - | ycjQ | b1313 | 0.12 | +0.7 |
1,373,157 | - | ycjQ | b1313 | 0.16 | +0.2 |
1,373,157 | - | ycjQ | b1313 | 0.16 | -0.1 |
1,373,379 | - | ycjQ | b1313 | 0.37 | +0.6 |
1,373,481 | + | ycjQ | b1313 | 0.47 | +0.4 |
1,373,481 | + | ycjQ | b1313 | 0.47 | -1.7 |
1,373,618 | + | ycjQ | b1313 | 0.60 | -1.6 |
1,373,618 | + | ycjQ | b1313 | 0.60 | -0.8 |
1,373,623 | + | ycjQ | b1313 | 0.60 | -0.3 |
1,373,623 | + | ycjQ | b1313 | 0.60 | +0.4 |
1,373,677 | + | ycjQ | b1313 | 0.66 | +0.9 |
1,373,836 | - | ycjQ | b1313 | 0.81 | +1.1 |
1,373,883 | + | ycjQ | b1313 | 0.85 | +0.8 |
Or see this region's nucleotide sequence