Experiment: LB_plus_SM_buffer with FelixO1_phage (wt new) 0.75 MOI
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF692 and GFF693 overlap by 8 nucleotides GFF693 and GFF694 overlap by 8 nucleotides GFF694 and GFF695 overlap by 1 nucleotides
GFF692 - ABC transport system, permease component YbhS, at 47,899 to 49,029
GFF692
GFF693 - ABC transporter multidrug efflux pump, fused ATP-binding domains, at 49,022 to 50,758
GFF693
GFF694 - Predicted membrane fusion protein (MFP) component of efflux pump, membrane anchor protein YbhG, at 50,751 to 51,746
GFF694
GFF695 - Transcriptional regulator YbiH, TetR family, at 51,746 to 52,420
GFF695
Position (kb) 49
50
51 Strain fitness (log2 ratio) -1
0
1 at 48.038 kb on + strand, within GFF692 at 48.054 kb on + strand, within GFF692 at 48.055 kb on - strand, within GFF692 at 48.056 kb on + strand, within GFF692 at 48.056 kb on + strand, within GFF692 at 48.084 kb on + strand, within GFF692 at 48.297 kb on + strand, within GFF692 at 48.340 kb on - strand, within GFF692 at 48.462 kb on + strand, within GFF692 at 48.611 kb on + strand, within GFF692 at 48.654 kb on + strand, within GFF692 at 48.797 kb on + strand, within GFF692 at 49.033 kb on + strand at 49.034 kb on - strand at 49.034 kb on - strand at 49.034 kb on - strand at 49.161 kb on + strand at 49.221 kb on - strand, within GFF693 at 49.247 kb on - strand, within GFF693 at 49.249 kb on + strand, within GFF693 at 49.253 kb on - strand, within GFF693 at 49.253 kb on - strand, within GFF693 at 49.253 kb on - strand, within GFF693 at 49.253 kb on - strand, within GFF693 at 49.313 kb on + strand, within GFF693 at 49.540 kb on + strand, within GFF693 at 49.542 kb on + strand, within GFF693 at 49.642 kb on + strand, within GFF693 at 49.643 kb on - strand, within GFF693 at 49.715 kb on - strand, within GFF693 at 49.801 kb on + strand, within GFF693 at 49.858 kb on + strand, within GFF693 at 50.021 kb on + strand, within GFF693 at 50.030 kb on - strand, within GFF693 at 50.051 kb on - strand, within GFF693 at 50.095 kb on + strand, within GFF693 at 50.096 kb on - strand, within GFF693 at 50.170 kb on - strand, within GFF693 at 50.455 kb on + strand, within GFF693 at 50.474 kb on - strand, within GFF693 at 50.506 kb on + strand, within GFF693 at 50.659 kb on - strand at 50.675 kb on - strand at 50.675 kb on - strand at 51.013 kb on + strand, within GFF694 at 51.051 kb on + strand, within GFF694 at 51.457 kb on + strand, within GFF694 at 51.555 kb on - strand, within GFF694 at 51.641 kb on - strand, within GFF694 at 51.673 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB_plus_SM_buffer with FelixO1_phage (wt new) 0.75 MOI remove 48,038 + GFF692 0.12 +0.3 48,054 + GFF692 0.14 +0.5 48,055 - GFF692 0.14 +0.4 48,056 + GFF692 0.14 -0.5 48,056 + GFF692 0.14 -1.0 48,084 + GFF692 0.16 +0.0 48,297 + GFF692 0.35 -0.1 48,340 - GFF692 0.39 +0.1 48,462 + GFF692 0.50 +0.1 48,611 + GFF692 0.63 +0.0 48,654 + GFF692 0.67 +0.2 48,797 + GFF692 0.79 +0.3 49,033 + -0.3 49,034 - -0.4 49,034 - -0.6 49,034 - -0.3 49,161 + +1.0 49,221 - GFF693 0.11 -0.1 49,247 - GFF693 0.13 +0.5 49,249 + GFF693 0.13 -0.1 49,253 - GFF693 0.13 +0.3 49,253 - GFF693 0.13 +0.4 49,253 - GFF693 0.13 +0.0 49,253 - GFF693 0.13 +0.1 49,313 + GFF693 0.17 +0.7 49,540 + GFF693 0.30 +0.4 49,542 + GFF693 0.30 +0.5 49,642 + GFF693 0.36 -0.1 49,643 - GFF693 0.36 +0.3 49,715 - GFF693 0.40 +1.1 49,801 + GFF693 0.45 +0.4 49,858 + GFF693 0.48 -1.0 50,021 + GFF693 0.58 +0.2 50,030 - GFF693 0.58 +0.2 50,051 - GFF693 0.59 +0.2 50,095 + GFF693 0.62 +0.7 50,096 - GFF693 0.62 +0.2 50,170 - GFF693 0.66 -0.6 50,455 + GFF693 0.82 +0.1 50,474 - GFF693 0.84 +0.0 50,506 + GFF693 0.85 -0.0 50,659 - -0.5 50,675 - -0.2 50,675 - -0.1 51,013 + GFF694 0.26 +0.0 51,051 + GFF694 0.30 +0.1 51,457 + GFF694 0.71 -0.4 51,555 - GFF694 0.81 -1.5 51,641 - GFF694 0.89 -0.6 51,673 + +0.2
Or see this region's nucleotide sequence