Experiment: LB_plus_SM_buffer with FelixO1_phage (wt new) 0.75 MOI
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF331 and GFF332 are separated by 481 nucleotides GFF332 and GFF333 are separated by 7 nucleotides GFF333 and GFF334 are separated by 98 nucleotides
GFF331 - Permease of the drug/metabolite transporter (DMT) superfamily, at 46,484 to 47,431
GFF331
GFF332 - Mg(2+) transport ATPase protein C, at 47,913 to 48,590
GFF332
GFF333 - hypothetical protein, at 48,598 to 48,711
GFF333
GFF334 - Mg(2+) transport ATPase, P-type (EC 3.6.3.2), at 48,810 to 51,536
GFF334
Position (kb) 47
48
49 Strain fitness (log2 ratio) -1
0
1
2 at 46.985 kb on - strand, within GFF331 at 46.985 kb on - strand, within GFF331 at 46.985 kb on - strand, within GFF331 at 46.985 kb on - strand, within GFF331 at 47.051 kb on - strand, within GFF331 at 47.218 kb on + strand, within GFF331 at 47.261 kb on + strand, within GFF331 at 47.261 kb on + strand, within GFF331 at 47.262 kb on - strand, within GFF331 at 47.308 kb on - strand, within GFF331 at 47.431 kb on + strand at 47.628 kb on - strand at 47.751 kb on - strand at 47.869 kb on - strand at 47.993 kb on + strand, within GFF332 at 47.993 kb on + strand, within GFF332 at 47.994 kb on - strand, within GFF332 at 48.302 kb on - strand, within GFF332 at 48.341 kb on + strand, within GFF332 at 48.436 kb on + strand, within GFF332 at 48.437 kb on - strand, within GFF332 at 48.626 kb on + strand, within GFF333 at 48.964 kb on + strand at 49.075 kb on - strand at 49.199 kb on - strand, within GFF334 at 49.226 kb on + strand, within GFF334 at 49.437 kb on - strand, within GFF334 at 49.472 kb on + strand, within GFF334 at 49.490 kb on + strand, within GFF334 at 49.567 kb on + strand, within GFF334
Per-strain Table
Position Strand Gene LocusTag Fraction LB_plus_SM_buffer with FelixO1_phage (wt new) 0.75 MOI remove 46,985 - GFF331 0.53 +0.0 46,985 - GFF331 0.53 -1.5 46,985 - GFF331 0.53 -0.1 46,985 - GFF331 0.53 +0.3 47,051 - GFF331 0.60 -0.3 47,218 + GFF331 0.77 -0.2 47,261 + GFF331 0.82 -0.1 47,261 + GFF331 0.82 -0.0 47,262 - GFF331 0.82 -0.0 47,308 - GFF331 0.87 -0.8 47,431 + +0.8 47,628 - +0.4 47,751 - +0.1 47,869 - +0.3 47,993 + GFF332 0.12 +1.0 47,993 + GFF332 0.12 +0.6 47,994 - GFF332 0.12 +0.4 48,302 - GFF332 0.57 -0.0 48,341 + GFF332 0.63 +0.9 48,436 + GFF332 0.77 +1.1 48,437 - GFF332 0.77 +0.2 48,626 + GFF333 0.25 +2.1 48,964 + +1.0 49,075 - +0.0 49,199 - GFF334 0.14 +0.3 49,226 + GFF334 0.15 -1.7 49,437 - GFF334 0.23 +0.5 49,472 + GFF334 0.24 -0.7 49,490 + GFF334 0.25 +0.2 49,567 + GFF334 0.28 +0.0
Or see this region's nucleotide sequence