Experiment: LB_plus_SM_buffer with 6H2_phage 0.5 MOI
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1115 and GFF1116 are separated by 98 nucleotides GFF1116 and GFF1117 are separated by 24 nucleotides
GFF1115 - Choline-sulfatase (EC 3.1.6.6), at 300,915 to 302,408
GFF1115
GFF1116 - putative arylsulfatase regulator, at 302,507 to 303,697
GFF1116
GFF1117 - FIG074102: hypothetical protein, at 303,722 to 304,969
GFF1117
Position (kb) 302
303
304 Strain fitness (log2 ratio) -1
0
1 at 301.551 kb on - strand, within GFF1115 at 301.553 kb on + strand, within GFF1115 at 301.579 kb on + strand, within GFF1115 at 301.579 kb on + strand, within GFF1115 at 301.579 kb on + strand, within GFF1115 at 301.579 kb on + strand, within GFF1115 at 301.582 kb on - strand, within GFF1115 at 301.637 kb on + strand, within GFF1115 at 301.638 kb on - strand, within GFF1115 at 301.689 kb on + strand, within GFF1115 at 301.867 kb on + strand, within GFF1115 at 301.962 kb on + strand, within GFF1115 at 302.007 kb on + strand, within GFF1115 at 302.051 kb on + strand, within GFF1115 at 302.074 kb on - strand, within GFF1115 at 302.116 kb on + strand, within GFF1115 at 302.229 kb on - strand, within GFF1115 at 302.234 kb on + strand, within GFF1115 at 302.235 kb on - strand, within GFF1115 at 302.244 kb on + strand, within GFF1115 at 302.244 kb on + strand, within GFF1115 at 302.415 kb on - strand at 302.415 kb on - strand at 302.432 kb on + strand at 302.505 kb on + strand at 302.506 kb on - strand at 302.730 kb on + strand, within GFF1116 at 302.804 kb on - strand, within GFF1116 at 302.804 kb on - strand, within GFF1116 at 302.904 kb on + strand, within GFF1116 at 302.991 kb on + strand, within GFF1116 at 303.029 kb on - strand, within GFF1116 at 303.083 kb on - strand, within GFF1116 at 303.360 kb on - strand, within GFF1116 at 303.577 kb on + strand, within GFF1116 at 303.578 kb on - strand, within GFF1116 at 303.581 kb on + strand at 303.581 kb on + strand at 303.581 kb on + strand at 303.582 kb on - strand at 303.650 kb on + strand at 303.705 kb on - strand at 303.986 kb on - strand, within GFF1117 at 303.990 kb on - strand, within GFF1117 at 303.990 kb on - strand, within GFF1117 at 304.025 kb on - strand, within GFF1117 at 304.260 kb on + strand, within GFF1117 at 304.261 kb on - strand, within GFF1117 at 304.261 kb on - strand, within GFF1117 at 304.262 kb on + strand, within GFF1117 at 304.263 kb on - strand, within GFF1117 at 304.295 kb on - strand, within GFF1117 at 304.497 kb on + strand, within GFF1117 at 304.501 kb on - strand, within GFF1117 at 304.501 kb on - strand, within GFF1117 at 304.512 kb on + strand, within GFF1117 at 304.615 kb on + strand, within GFF1117 at 304.615 kb on + strand, within GFF1117 at 304.616 kb on - strand, within GFF1117 at 304.634 kb on + strand, within GFF1117
Per-strain Table
Position Strand Gene LocusTag Fraction LB_plus_SM_buffer with 6H2_phage 0.5 MOI remove 301,551 - GFF1115 0.43 -0.2 301,553 + GFF1115 0.43 -0.7 301,579 + GFF1115 0.44 +1.1 301,579 + GFF1115 0.44 +0.2 301,579 + GFF1115 0.44 +1.1 301,579 + GFF1115 0.44 +0.4 301,582 - GFF1115 0.45 +0.5 301,637 + GFF1115 0.48 +0.1 301,638 - GFF1115 0.48 +0.1 301,689 + GFF1115 0.52 +0.2 301,867 + GFF1115 0.64 -0.6 301,962 + GFF1115 0.70 +0.4 302,007 + GFF1115 0.73 +1.6 302,051 + GFF1115 0.76 -0.6 302,074 - GFF1115 0.78 +0.9 302,116 + GFF1115 0.80 +0.3 302,229 - GFF1115 0.88 -0.0 302,234 + GFF1115 0.88 +0.7 302,235 - GFF1115 0.88 -0.2 302,244 + GFF1115 0.89 +0.1 302,244 + GFF1115 0.89 +0.3 302,415 - -0.6 302,415 - -0.1 302,432 + -0.9 302,505 + -0.7 302,506 - +0.1 302,730 + GFF1116 0.19 +0.5 302,804 - GFF1116 0.25 +0.0 302,804 - GFF1116 0.25 +0.1 302,904 + GFF1116 0.33 +0.3 302,991 + GFF1116 0.41 +0.3 303,029 - GFF1116 0.44 +0.1 303,083 - GFF1116 0.48 +0.4 303,360 - GFF1116 0.72 -0.3 303,577 + GFF1116 0.90 +0.6 303,578 - GFF1116 0.90 +0.4 303,581 + +0.2 303,581 + +0.6 303,581 + +0.1 303,582 - +0.5 303,650 + +0.7 303,705 - +0.2 303,986 - GFF1117 0.21 -0.4 303,990 - GFF1117 0.21 -0.3 303,990 - GFF1117 0.21 +0.0 304,025 - GFF1117 0.24 +0.1 304,260 + GFF1117 0.43 -0.8 304,261 - GFF1117 0.43 +0.2 304,261 - GFF1117 0.43 +0.1 304,262 + GFF1117 0.43 +0.7 304,263 - GFF1117 0.43 +0.1 304,295 - GFF1117 0.46 -1.0 304,497 + GFF1117 0.62 -0.9 304,501 - GFF1117 0.62 +0.4 304,501 - GFF1117 0.62 +0.2 304,512 + GFF1117 0.63 -0.3 304,615 + GFF1117 0.72 +0.0 304,615 + GFF1117 0.72 +0.0 304,616 - GFF1117 0.72 -0.1 304,634 + GFF1117 0.73 -0.7
Or see this region's nucleotide sequence