Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4449

Experiment: D-Trehalose 20mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose 20mM (C)
5,321,760	+		Echvi_4447	0.87	-0.6
5,321,763	-		Echvi_4447	0.88	-0.7
5,321,827	+				-0.7
5,321,828	-				+0.9
5,321,850	+				-0.2
5,321,851	-				-0.3
5,321,928	+				+0.1
5,321,932	+				+0.3
5,321,941	+				-0.6
5,321,942	-				+0.1
5,321,986	+		Echvi_4448	0.20	+3.0
5,321,986	+		Echvi_4448	0.20	+0.6
5,322,007	+		Echvi_4448	0.30	+0.4
5,322,007	+		Echvi_4448	0.30	-0.8
5,322,008	-		Echvi_4448	0.30	-0.7
5,322,033	+		Echvi_4448	0.43	+1.3
5,322,034	-		Echvi_4448	0.43	+0.1
5,322,037	-		Echvi_4448	0.44	-0.5
5,322,055	+		Echvi_4448	0.53	-0.1
5,322,056	-		Echvi_4448	0.54	+1.3
5,322,056	-		Echvi_4448	0.54	+0.1
5,322,056	-		Echvi_4448	0.54	+0.8
5,322,060	+		Echvi_4448	0.56	-1.2
5,322,060	+		Echvi_4448	0.56	+1.7
5,322,060	+		Echvi_4448	0.56	-0.1
5,322,061	-		Echvi_4448	0.56	+0.4
5,322,066	-		Echvi_4448	0.58	-1.5
5,322,066	-		Echvi_4448	0.58	+0.3
5,322,068	+		Echvi_4448	0.59	-0.4
5,322,069	-		Echvi_4448	0.60	+1.0
5,322,111	-		Echvi_4448	0.80	-0.1
5,322,111	-		Echvi_4448	0.80	-1.0
5,322,111	-		Echvi_4448	0.80	+0.8
5,322,118	-		Echvi_4448	0.84	-1.2
5,322,165	+				-0.3
5,322,204	-				-2.4
5,322,204	-				+0.9
5,322,205	+				+0.8
5,322,206	-				-0.6
5,322,208	+				+0.6
5,322,209	-				-2.4
5,322,209	-				+0.1
5,322,209	-				+0.5
5,322,227	-				+1.3
5,322,237	+				-1.0
5,322,260	+				-0.6
5,322,263	+				-0.5
5,322,273	-				-0.5
5,322,307	+				-0.0
5,322,308	-				-0.3
5,322,335	+				+1.5
5,322,339	+				-0.5
5,322,339	+				+0.9
5,322,350	-				-0.2
5,322,431	-				-0.3
5,322,431	-				+0.5
5,322,433	-				+0.3
5,322,433	-				-1.2
5,322,460	+				-1.5
5,322,466	+				+1.3
5,322,466	+				-1.6
5,322,473	+				-0.3
5,322,485	+				+1.1
5,322,485	+				-0.5
5,322,486	-				+0.1
5,322,486	-				-0.2
5,322,486	-				+0.8
5,322,486	-				-0.0
5,322,486	-				-0.2
5,322,489	-				-2.6
5,322,493	-				-0.5
5,322,500	-				+0.3
5,322,502	+				-1.2
5,322,506	+				-1.2
5,322,507	-				+0.6
5,322,507	-				-0.1
5,322,507	-				+1.9
5,322,512	-				-3.4
5,322,580	-				+0.6
5,322,682	+				+0.6
5,322,685	+				+0.4
5,322,689	+				+0.0
5,322,689	+				-1.8
5,322,689	+				-0.2
5,322,689	+				+0.3
5,322,689	+				+0.3
5,322,689	+				+1.5
5,322,689	+				-0.5
5,322,690	-				-2.1
5,322,737	+				+0.9
5,322,737	+				+0.6
5,322,740	+				-2.6
5,322,741	-				-2.5
5,322,741	-				+0.5
5,322,744	+				-0.3
5,322,779	-				+2.7
5,322,779	-				+1.9
5,322,782	+				+0.7
5,322,782	+				-0.2
5,322,782	+				+0.8
5,322,783	-				+0.4
5,322,783	-				-0.6
5,322,783	-				+0.4
5,322,783	-				+0.6
5,322,804	-				-0.4
5,322,804	-				-1.6
5,322,804	-				-0.6
5,322,927	+		Echvi_4449	0.13	-0.7
5,322,951	-		Echvi_4449	0.15	+0.6
5,322,951	-		Echvi_4449	0.15	+0.0
5,323,042	-		Echvi_4449	0.22	+1.8
5,323,085	+		Echvi_4449	0.25	-3.1
5,323,090	+		Echvi_4449	0.25	-0.4
5,323,139	+		Echvi_4449	0.29	+0.3
5,323,177	-		Echvi_4449	0.32	+0.5
5,323,177	-		Echvi_4449	0.32	-0.2
5,323,177	-		Echvi_4449	0.32	-0.9
5,323,191	-		Echvi_4449	0.33	+2.6
5,323,216	+		Echvi_4449	0.35	+0.2
5,323,217	-		Echvi_4449	0.35	+1.2
5,323,220	+		Echvi_4449	0.35	-1.5
5,323,221	-		Echvi_4449	0.35	+1.4
5,323,221	-		Echvi_4449	0.35	+0.3
5,323,221	-		Echvi_4449	0.35	+0.0
5,323,221	-		Echvi_4449	0.35	+1.0
5,323,221	-		Echvi_4449	0.35	+2.3
5,323,221	-		Echvi_4449	0.35	+3.1
5,323,221	-		Echvi_4449	0.35	+0.7
5,323,244	+		Echvi_4449	0.37	+0.8
5,323,245	-		Echvi_4449	0.37	-2.8
5,323,245	-		Echvi_4449	0.37	+0.4
5,323,245	-		Echvi_4449	0.37	+0.7
5,323,245	-		Echvi_4449	0.37	-1.1
5,323,429	+		Echvi_4449	0.51	+1.7
5,323,430	-		Echvi_4449	0.51	+0.1
5,323,454	-		Echvi_4449	0.52	+3.3
5,323,454	-		Echvi_4449	0.52	-1.0
5,323,522	+		Echvi_4449	0.57	-2.4
5,323,538	-		Echvi_4449	0.59	+0.6
5,323,586	+		Echvi_4449	0.62	+0.3
5,323,586	+		Echvi_4449	0.62	+0.5
5,323,605	-		Echvi_4449	0.64	+0.3
5,323,610	-		Echvi_4449	0.64	-0.5
5,323,630	+		Echvi_4449	0.65	+0.5
5,323,631	-		Echvi_4449	0.65	+0.0
5,323,672	-		Echvi_4449	0.69	-0.7
5,323,672	-		Echvi_4449	0.69	+0.5
5,323,677	-		Echvi_4449	0.69	-1.7
5,323,702	+		Echvi_4449	0.71	+1.3
5,323,702	+		Echvi_4449	0.71	+1.5
5,323,778	+		Echvi_4449	0.76	+0.1
5,323,779	-		Echvi_4449	0.76	-0.7
5,323,801	-		Echvi_4449	0.78	-1.6
5,323,841	+		Echvi_4449	0.81	+0.1
5,323,884	-		Echvi_4449	0.84	+1.6
5,323,962	+				-2.5
5,323,962	+				+0.9
5,323,963	-				+0.1
5,323,963	-				-1.0
5,323,967	+				+0.6
5,323,968	-				+0.5
5,323,971	+				-0.0
5,323,972	-				-1.1
5,324,008	-				-0.4
5,324,117	-				-1.8
5,324,131	+				+0.5
5,324,131	+				+2.3
5,324,132	-				-0.5
5,324,132	-				-1.4
5,324,143	+				+2.1
5,324,143	+				+1.5
5,324,145	+				-2.1
5,324,145	+				-0.9
5,324,145	+				-0.9
5,324,198	+				+0.1
5,324,198	+				+0.7
5,324,198	+				-2.8
5,324,198	+				+0.5
5,324,199	-				-2.5
5,324,199	-				-1.0
5,324,199	-				+0.5
5,324,257	-				+3.3
5,324,324	-				+1.6
5,324,340	+				-1.8
5,324,340	+				-3.7
5,324,341	-				-0.7
5,324,351	+				+0.5
5,324,383	+				+0.5
5,324,384	-				-0.7
5,324,413	-				+0.6
5,324,543	-		Echvi_4450	0.13	-2.2
5,324,548	+		Echvi_4450	0.13	-0.2
5,324,549	-		Echvi_4450	0.13	-1.4
5,324,589	+		Echvi_4450	0.14	-0.8
5,324,646	+		Echvi_4450	0.16	+1.3
5,324,646	+		Echvi_4450	0.16	-0.9
5,324,647	-		Echvi_4450	0.16	-1.4
5,324,647	-		Echvi_4450	0.16	+1.3
5,324,647	-		Echvi_4450	0.16	+0.8
5,324,656	+		Echvi_4450	0.16	+0.2
5,324,743	-		Echvi_4450	0.19	+0.8
5,324,743	-		Echvi_4450	0.19	+0.7
5,324,861	-		Echvi_4450	0.23	+1.3
5,324,861	-		Echvi_4450	0.23	-0.7
5,324,864	-		Echvi_4450	0.23	-0.9
5,324,891	+		Echvi_4450	0.24	-0.2
5,324,892	-		Echvi_4450	0.24	+3.3
5,324,921	-		Echvi_4450	0.25	-0.1
5,324,922	+		Echvi_4450	0.25	+1.3
5,324,923	-		Echvi_4450	0.25	-0.1
5,324,994	+		Echvi_4450	0.27	-0.1
5,325,026	-		Echvi_4450	0.28	+0.6
5,325,066	+		Echvi_4450	0.29	-1.0