Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4014

Experiment: D-Trehalose 20mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose 20mM (C)
4,805,014	-				-0.9
4,805,014	-				-0.6
4,805,036	+				+0.5
4,805,079	-				+0.1
4,805,082	+				-2.5
4,805,154	+				-0.3
4,805,155	-				-0.8
4,805,155	-				+3.3
4,805,196	+				-0.1
4,805,248	-				+0.9
4,805,248	-				-3.4
4,805,270	-				+2.5
4,805,270	-				-1.3
4,805,275	-				+0.1
4,805,319	+				+1.3
4,805,356	+				-0.3
4,805,370	+				-0.6
4,805,370	+				-0.0
4,805,434	-				+3.8
4,805,434	-				-1.7
4,805,437	+				+0.5
4,805,438	-				+1.3
4,805,439	+				-0.7
4,805,513	+				-0.6
4,805,513	+				+1.3
4,805,540	+		Echvi_4013	0.11	-0.4
4,805,541	-		Echvi_4013	0.12	+3.1
4,805,555	-		Echvi_4013	0.14	-0.4
4,805,555	-		Echvi_4013	0.14	+0.3
4,805,561	+		Echvi_4013	0.16	+1.0
4,805,561	+		Echvi_4013	0.16	-0.4
4,805,561	+		Echvi_4013	0.16	-1.1
4,805,567	+		Echvi_4013	0.17	-0.6
4,805,787	+		Echvi_4013	0.63	-0.1
4,805,788	-		Echvi_4013	0.63	-0.7
4,805,788	-		Echvi_4013	0.63	-2.7
4,805,788	-		Echvi_4013	0.63	-1.3
4,805,794	-		Echvi_4013	0.64	-1.5
4,805,813	+		Echvi_4013	0.68	-0.8
4,805,841	+		Echvi_4013	0.74	-1.4
4,805,851	+		Echvi_4013	0.76	+0.7
4,805,852	-		Echvi_4013	0.76	+0.5
4,805,852	-		Echvi_4013	0.76	-0.6
4,805,871	+		Echvi_4013	0.80	-0.8
4,805,871	+		Echvi_4013	0.80	-0.3
4,805,871	+		Echvi_4013	0.80	-0.4
4,805,872	-		Echvi_4013	0.80	+0.4
4,805,872	-		Echvi_4013	0.80	+0.1
4,805,872	-		Echvi_4013	0.80	-0.7
4,805,872	-		Echvi_4013	0.80	-0.4
4,805,893	-		Echvi_4013	0.84	-1.9
4,805,902	+		Echvi_4013	0.86	+0.6
4,805,914	-		Echvi_4013	0.89	+0.8
4,805,920	+				+0.3
4,805,920	+				-1.9
4,805,920	+				-0.7
4,805,921	-				+0.9
4,805,921	-				+0.3
4,805,966	-				-0.3
4,805,996	+				+0.1
4,806,018	-				-1.9
4,806,113	+				+0.8
4,806,113	+				-1.7
4,806,113	+				+0.5
4,806,113	+				+0.9
4,806,114	-				-1.3
4,806,114	-				+0.3
4,806,148	+				-0.0
4,806,149	-				-0.1
4,806,171	-		Echvi_4014	0.11	-0.4
4,806,180	-		Echvi_4014	0.12	-0.5
4,806,180	-		Echvi_4014	0.12	-3.2
4,806,181	+		Echvi_4014	0.12	+0.0
4,806,182	-		Echvi_4014	0.12	-0.6
4,806,182	-		Echvi_4014	0.12	+0.3
4,806,184	+		Echvi_4014	0.12	+1.4
4,806,185	-		Echvi_4014	0.12	+0.1
4,806,217	+		Echvi_4014	0.14	-0.8
4,806,253	-		Echvi_4014	0.17	+1.3
4,806,283	+		Echvi_4014	0.19	-0.4
4,806,283	+		Echvi_4014	0.19	-1.3
4,806,284	-		Echvi_4014	0.19	-1.0
4,806,404	+		Echvi_4014	0.27	-0.7
4,806,404	+		Echvi_4014	0.27	-1.0
4,806,405	-		Echvi_4014	0.27	-0.1
4,806,409	-		Echvi_4014	0.27	+2.5
4,806,436	+		Echvi_4014	0.29	-0.0
4,806,437	-		Echvi_4014	0.29	-0.4
4,806,607	-		Echvi_4014	0.41	-2.7
4,806,634	+		Echvi_4014	0.42	+1.1
4,806,667	+		Echvi_4014	0.45	-0.2
4,806,668	-		Echvi_4014	0.45	+1.1
4,806,730	+		Echvi_4014	0.49	+0.7
4,806,862	-		Echvi_4014	0.58	+0.2
4,806,940	-		Echvi_4014	0.63	-0.4
4,806,944	+		Echvi_4014	0.63	-1.1
4,806,944	+		Echvi_4014	0.63	+0.7
4,806,945	-		Echvi_4014	0.63	+0.3
4,807,010	+		Echvi_4014	0.68	+0.5
4,807,010	+		Echvi_4014	0.68	+0.1
4,807,012	+		Echvi_4014	0.68	+1.7
4,807,012	+		Echvi_4014	0.68	-0.7
4,807,013	-		Echvi_4014	0.68	-0.7
4,807,027	+		Echvi_4014	0.69	+0.4
4,807,086	-		Echvi_4014	0.73	+2.9
4,807,106	+		Echvi_4014	0.74	+0.3
4,807,107	-		Echvi_4014	0.74	+1.3
4,807,135	-		Echvi_4014	0.76	+0.0
4,807,191	+		Echvi_4014	0.80	+0.6
4,807,198	+		Echvi_4014	0.80	-0.8
4,807,198	+		Echvi_4014	0.80	-0.3
4,807,198	+		Echvi_4014	0.80	+0.0
4,807,198	+		Echvi_4014	0.80	-1.0
4,807,198	+		Echvi_4014	0.80	-0.3
4,807,199	-		Echvi_4014	0.80	-2.3
4,807,199	-		Echvi_4014	0.80	+1.6
4,807,199	-		Echvi_4014	0.80	-1.0
4,807,199	-		Echvi_4014	0.80	-1.4
4,807,199	-		Echvi_4014	0.80	-2.5
4,807,199	-		Echvi_4014	0.80	+0.7
4,807,199	-		Echvi_4014	0.80	-0.4
4,807,202	+		Echvi_4014	0.81	+0.7
4,807,202	+		Echvi_4014	0.81	-1.2
4,807,202	+		Echvi_4014	0.81	-0.4
4,807,203	-		Echvi_4014	0.81	+1.9
4,807,203	-		Echvi_4014	0.81	-0.5
4,807,203	-		Echvi_4014	0.81	-1.3
4,807,203	-		Echvi_4014	0.81	+2.5
4,807,203	-		Echvi_4014	0.81	+0.6
4,807,203	-		Echvi_4014	0.81	+0.4
4,807,207	+		Echvi_4014	0.81	+2.0
4,807,207	+		Echvi_4014	0.81	-0.5
4,807,207	+		Echvi_4014	0.81	+0.6
4,807,207	+		Echvi_4014	0.81	+1.8
4,807,207	+		Echvi_4014	0.81	+1.3
4,807,207	+		Echvi_4014	0.81	-0.1
4,807,208	-		Echvi_4014	0.81	-0.5
4,807,208	-		Echvi_4014	0.81	-0.3
4,807,208	-		Echvi_4014	0.81	-0.3
4,807,208	-		Echvi_4014	0.81	-1.4
4,807,208	-		Echvi_4014	0.81	+1.3
4,807,208	-		Echvi_4014	0.81	-0.6
4,807,215	-		Echvi_4014	0.82	-0.5
4,807,215	-		Echvi_4014	0.82	-0.4
4,807,226	+		Echvi_4014	0.82	-0.1
4,807,229	-		Echvi_4014	0.83	-0.8
4,807,229	-		Echvi_4014	0.83	+0.1
4,807,295	+		Echvi_4014	0.87	+2.5
4,807,295	+		Echvi_4014	0.87	-0.7
4,807,296	-		Echvi_4014	0.87	+0.6
4,807,296	-		Echvi_4014	0.87	-0.3
4,807,323	-		Echvi_4014	0.89	-0.1
4,807,323	-		Echvi_4014	0.89	-1.4
4,807,331	+		Echvi_4014	0.89	-1.3
4,807,375	+				-1.4
4,807,384	-				+1.8
4,807,408	-				-0.2
4,807,424	+				+2.4
4,807,495	+				+0.6
4,807,505	+				+2.3
4,807,506	-				+1.8
4,807,530	-				+0.5
4,807,728	+				+3.8
4,807,769	+				-1.9
4,807,820	+				+0.6
4,807,855	+				+0.8
4,807,856	-				+1.4
4,808,028	+		Echvi_4015	0.22	+0.5
4,808,137	-		Echvi_4015	0.30	+1.5
4,808,137	-		Echvi_4015	0.30	-2.6
4,808,164	+		Echvi_4015	0.32	-1.3
4,808,164	+		Echvi_4015	0.32	+1.6
4,808,322	+		Echvi_4015	0.43	-0.3
4,808,322	+		Echvi_4015	0.43	-3.3
4,808,323	-		Echvi_4015	0.43	-2.7
4,808,323	-		Echvi_4015	0.43	+1.5
4,808,323	-		Echvi_4015	0.43	-0.1
4,808,326	-		Echvi_4015	0.43	-1.1
4,808,345	+		Echvi_4015	0.45	-1.7
4,808,456	+		Echvi_4015	0.53	-2.3
4,808,456	+		Echvi_4015	0.53	+2.6
4,808,464	-		Echvi_4015	0.53	-0.0
4,808,464	-		Echvi_4015	0.53	+0.6
4,808,464	-		Echvi_4015	0.53	-0.1
4,808,468	+		Echvi_4015	0.54	-0.4
4,808,469	-		Echvi_4015	0.54	-0.1
4,808,486	+		Echvi_4015	0.55	-1.5
4,808,487	-		Echvi_4015	0.55	+0.4
4,808,487	-		Echvi_4015	0.55	+2.0