Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3776

Experiment: D-Trehalose 20mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose 20mM (C)
4,500,031	-		Echvi_3775	0.40	+0.5
4,500,031	-		Echvi_3775	0.40	+0.7
4,500,033	+		Echvi_3775	0.40	+0.1
4,500,065	-		Echvi_3775	0.42	-0.7
4,500,110	+		Echvi_3775	0.45	+0.4
4,500,289	+		Echvi_3775	0.56	+0.1
4,500,289	+		Echvi_3775	0.56	-0.7
4,500,289	+		Echvi_3775	0.56	-0.0
4,500,289	+		Echvi_3775	0.56	+0.4
4,500,289	+				-1.5
4,500,290	-		Echvi_3775	0.56	+1.9
4,500,290	-		Echvi_3775	0.56	+0.6
4,500,290	-		Echvi_3775	0.56	-1.7
4,500,290	-		Echvi_3775	0.56	-0.8
4,500,290	-		Echvi_3775	0.56	-0.3
4,500,290	-		Echvi_3775	0.56	-0.3
4,500,290	-		Echvi_3775	0.56	-0.4
4,500,290	-		Echvi_3775	0.56	-0.3
4,500,300	+		Echvi_3775	0.56	+0.7
4,500,331	-		Echvi_3775	0.58	-2.1
4,500,331	-		Echvi_3775	0.58	-0.3
4,500,331	-		Echvi_3775	0.58	+1.0
4,500,333	-		Echvi_3775	0.58	+1.2
4,500,405	+		Echvi_3775	0.63	+0.8
4,500,420	+		Echvi_3775	0.64	-0.3
4,500,421	-		Echvi_3775	0.64	+1.1
4,500,422	+		Echvi_3775	0.64	-1.2
4,500,423	-		Echvi_3775	0.64	-1.3
4,500,423	-		Echvi_3775	0.64	+0.5
4,500,423	-		Echvi_3775	0.64	-0.2
4,500,438	+		Echvi_3775	0.65	+0.6
4,500,451	-		Echvi_3775	0.66	-0.6
4,500,453	+		Echvi_3775	0.66	-2.4
4,500,453	+		Echvi_3775	0.66	+1.1
4,500,453	+		Echvi_3775	0.66	+0.3
4,500,483	+		Echvi_3775	0.68	+1.1
4,500,574	+		Echvi_3775	0.73	-2.6
4,500,575	-		Echvi_3775	0.73	+0.1
4,500,575	-		Echvi_3775	0.73	-0.1
4,500,575	-		Echvi_3775	0.73	-0.4
4,500,632	-		Echvi_3775	0.77	+0.4
4,500,675	+		Echvi_3775	0.79	-0.6
4,500,676	-		Echvi_3775	0.79	-0.2
4,500,680	+		Echvi_3775	0.80	+0.0
4,500,680	+		Echvi_3775	0.80	+0.2
4,500,681	-		Echvi_3775	0.80	-2.4
4,500,681	-		Echvi_3775	0.80	-0.2
4,500,741	-		Echvi_3775	0.83	-1.5
4,500,787	-		Echvi_3775	0.86	-1.1
4,500,790	-		Echvi_3775	0.86	+1.6
4,500,828	+		Echvi_3775	0.89	-0.7
4,500,844	-		Echvi_3775	0.90	+0.1
4,500,844	-		Echvi_3775	0.90	-0.6
4,500,861	-				-0.1
4,500,878	+				+0.3
4,500,888	-				-3.0
4,500,909	+				+0.3
4,500,909	+				-0.9
4,500,910	-				+1.3
4,500,912	+				+0.6
4,500,913	-				+0.0
4,500,965	+				-0.1
4,500,965	+				-0.2
4,500,966	-				+0.7
4,500,966	-				-1.4
4,500,966	-				-1.0
4,500,966	-				-0.4
4,500,970	+				-0.3
4,501,017	+				-0.5
4,501,069	+				-2.8
4,501,089	-				-0.5
4,501,147	-				-0.1
4,501,147	-				+0.2
4,501,147	-				-0.3
4,501,147	-				-1.0
4,501,147	-				-1.5
4,501,147	-				+0.3
4,501,251	+		Echvi_3776	0.15	+0.3
4,501,251	+		Echvi_3776	0.15	-1.3
4,501,252	-		Echvi_3776	0.15	-0.3
4,501,252	-		Echvi_3776	0.15	+0.4
4,501,261	-		Echvi_3776	0.15	+1.3
4,501,261	-		Echvi_3776	0.15	-0.2
4,501,300	+		Echvi_3776	0.18	-0.3
4,501,300	+		Echvi_3776	0.18	-0.2
4,501,306	+		Echvi_3776	0.18	+0.9
4,501,307	-		Echvi_3776	0.18	+0.5
4,501,307	-		Echvi_3776	0.18	+1.9
4,501,307	-		Echvi_3776	0.18	+0.6
4,501,307	-		Echvi_3776	0.18	-0.1
4,501,324	+		Echvi_3776	0.19	-0.3
4,501,325	-		Echvi_3776	0.19	+0.4
4,501,325	-		Echvi_3776	0.19	-0.8
4,501,473	+		Echvi_3776	0.29	-0.4
4,501,542	-		Echvi_3776	0.34	-0.4
4,501,547	-		Echvi_3776	0.34	-0.1
4,501,608	+		Echvi_3776	0.38	+1.8
4,501,608	+		Echvi_3776	0.38	+1.1
4,501,608	+		Echvi_3776	0.38	-1.0
4,501,609	-		Echvi_3776	0.38	-1.6
4,501,624	-		Echvi_3776	0.39	-1.3
4,501,626	+		Echvi_3776	0.39	+0.9
4,501,663	-		Echvi_3776	0.42	+0.5
4,501,785	+		Echvi_3776	0.50	+0.3
4,501,785	+		Echvi_3776	0.50	+1.0
4,501,785	+		Echvi_3776	0.50	-1.0
4,501,785	+		Echvi_3776	0.50	+0.3
4,501,786	-				+1.7
4,501,786	-		Echvi_3776	0.50	-0.6
4,501,797	+		Echvi_3776	0.51	-2.2
4,501,850	-		Echvi_3776	0.54	+0.2
4,502,004	+		Echvi_3776	0.64	-1.0
4,502,005	-		Echvi_3776	0.64	+0.3
4,502,056	+		Echvi_3776	0.68	+2.0
4,502,074	-		Echvi_3776	0.69	-1.4
4,502,129	-		Echvi_3776	0.72	+0.5
4,502,193	+		Echvi_3776	0.77	+0.7
4,502,194	-		Echvi_3776	0.77	-0.4
4,502,221	+		Echvi_3776	0.79	-0.4
4,502,221	+		Echvi_3776	0.79	+0.2
4,502,222	-		Echvi_3776	0.79	+0.2
4,502,222	-		Echvi_3776	0.79	+2.9
4,502,250	+		Echvi_3776	0.80	-0.6
4,502,251	-		Echvi_3776	0.81	+0.4
4,502,266	+		Echvi_3776	0.82	-0.6
4,502,267	-		Echvi_3776	0.82	+3.2
4,502,293	-		Echvi_3776	0.83	+0.6
4,502,320	+		Echvi_3776	0.85	+0.5
4,502,320	+		Echvi_3776	0.85	+0.9
4,502,397	+				+1.7
4,502,397	+				-1.3
4,502,397	+				-0.4
4,502,398	-				-0.0
4,502,432	+				-3.8
4,502,432	+				+0.2
4,502,441	+				-2.6
4,502,441	+				+1.3
4,502,441	+				-1.0
4,502,441	+				+0.1
4,502,442	-				-0.3
4,502,442	-				-1.2
4,502,493	-				+1.3
4,502,495	+				+0.6
4,502,549	-				+1.1
4,502,736	+				-0.0
4,502,736	+				+0.1
4,502,737	-				-0.2
4,502,751	-				-0.1
4,502,761	+				+0.6
4,502,826	+				-0.0
4,502,826	+				-0.4
4,502,827	-				+0.2
4,502,827	-				+3.0
4,503,077	-		Echvi_3777	0.28	+0.2
4,503,079	+		Echvi_3777	0.28	-0.7
4,503,088	+		Echvi_3777	0.29	+0.6
4,503,139	+		Echvi_3777	0.33	+1.2
4,503,140	-		Echvi_3777	0.34	-0.0
4,503,140	-		Echvi_3777	0.34	-0.5
4,503,144	-		Echvi_3777	0.34	-0.0
4,503,277	+		Echvi_3777	0.46	-0.5
4,503,278	-		Echvi_3777	0.46	-0.5
4,503,284	+		Echvi_3777	0.46	+2.4
4,503,284	+		Echvi_3777	0.46	+0.1
4,503,285	-		Echvi_3777	0.46	-0.2
4,503,329	+		Echvi_3777	0.50	+0.2
4,503,430	+		Echvi_3777	0.59	+0.3
4,503,430	+		Echvi_3777	0.59	-0.7
4,503,431	-		Echvi_3777	0.59	+0.6
4,503,431	-		Echvi_3777	0.59	+0.1
4,503,431	-		Echvi_3777	0.59	+0.5
4,503,454	+		Echvi_3777	0.61	-0.2
4,503,454	+		Echvi_3777	0.61	+3.9
4,503,455	-		Echvi_3777	0.61	+0.8
4,503,455	-		Echvi_3777	0.61	+0.6
4,503,455	-		Echvi_3777	0.61	+0.1