Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3699

Experiment: D-Trehalose 20mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose 20mM (C)
4,404,777	+		Echvi_3698	0.13	+1.2
4,404,777	+		Echvi_3698	0.13	+0.9
4,404,777	+		Echvi_3698	0.13	+0.5
4,404,778	-		Echvi_3698	0.13	-1.4
4,404,778	-		Echvi_3698	0.13	+1.2
4,404,778	-		Echvi_3698	0.13	+0.8
4,404,778	-		Echvi_3698	0.13	+1.1
4,405,048	+		Echvi_3698	0.45	-1.1
4,405,059	+		Echvi_3698	0.46	-2.7
4,405,136	+		Echvi_3698	0.55	-2.9
4,405,146	-		Echvi_3698	0.56	+2.4
4,405,177	+		Echvi_3698	0.60	-0.1
4,405,280	+		Echvi_3698	0.72	-1.1
4,405,348	+		Echvi_3698	0.80	-0.8
4,405,399	+		Echvi_3698	0.86	+0.4
4,405,428	+		Echvi_3698	0.89	-0.6
4,405,473	-				+0.4
4,405,582	-				-0.6
4,405,582	-				-1.2
4,405,582	-				+0.4
4,405,592	+				+1.2
4,405,660	+				+0.8
4,405,660	+				-1.1
4,405,739	+				+2.5
4,405,739	+				+0.6
4,405,739	+				-0.4
4,405,739	+				+0.6
4,405,739	+				+0.3
4,405,739	+				+2.2
4,405,739	+				-0.6
4,405,739	+				+0.7
4,405,739	+				-0.3
4,405,739	+				-0.8
4,405,739	+				-0.8
4,405,740	-				+0.6
4,405,740	-				+0.3
4,405,740	-				-0.4
4,405,740	-				-0.2
4,405,829	+		Echvi_3699	0.17	+0.5
4,405,830	-		Echvi_3699	0.17	+3.0
4,405,830	-		Echvi_3699	0.17	-0.2
4,405,833	+		Echvi_3699	0.17	+0.2
4,405,833	+		Echvi_3699	0.17	-0.4
4,405,833	+		Echvi_3699	0.17	-0.1
4,405,833	+		Echvi_3699	0.17	-1.6
4,405,833	+		Echvi_3699	0.17	-0.5
4,405,860	+		Echvi_3699	0.20	+2.8
4,405,860	+		Echvi_3699	0.20	-0.3
4,405,860	+		Echvi_3699	0.20	-0.9
4,405,861	-		Echvi_3699	0.21	+0.6
4,405,884	-		Echvi_3699	0.23	-0.1
4,405,931	-		Echvi_3699	0.29	+0.5
4,405,968	+		Echvi_3699	0.34	+1.8
4,406,076	+		Echvi_3699	0.47	+0.2
4,406,081	+		Echvi_3699	0.48	+2.8
4,406,081	+		Echvi_3699	0.48	+0.7
4,406,081	+		Echvi_3699	0.48	-0.3
4,406,081	+		Echvi_3699	0.48	-0.0
4,406,081	+		Echvi_3699	0.48	+0.4
4,406,082	-		Echvi_3699	0.48	+0.9
4,406,082	-		Echvi_3699	0.48	+0.5
4,406,082	-		Echvi_3699	0.48	-0.3
4,406,082	-		Echvi_3699	0.48	+1.9
4,406,082	-		Echvi_3699	0.48	+1.8
4,406,082	-		Echvi_3699	0.48	-0.6
4,406,098	+		Echvi_3699	0.50	+1.1
4,406,098	+		Echvi_3699	0.50	-1.6
4,406,099	-		Echvi_3699	0.50	-0.5
4,406,115	+		Echvi_3699	0.52	+0.9
4,406,115	+		Echvi_3699	0.52	+0.3
4,406,117	+		Echvi_3699	0.53	-3.2
4,406,117	+		Echvi_3699	0.53	-0.4
4,406,118	-		Echvi_3699	0.53	-0.1
4,406,123	+		Echvi_3699	0.53	+0.1
4,406,123	+		Echvi_3699	0.53	+1.9
4,406,124	-		Echvi_3699	0.53	+1.1
4,406,124	-		Echvi_3699	0.53	+0.0
4,406,124	-		Echvi_3699	0.53	+2.2
4,406,200	+		Echvi_3699	0.63	-0.3
4,406,200	+		Echvi_3699	0.63	-1.0
4,406,200	+		Echvi_3699	0.63	+0.1
4,406,201	-		Echvi_3699	0.63	+0.8
4,406,201	-		Echvi_3699	0.63	+1.1
4,406,201	-		Echvi_3699	0.63	+1.4
4,406,205	+		Echvi_3699	0.64	-0.1
4,406,206	-		Echvi_3699	0.64	-0.7
4,406,206	-		Echvi_3699	0.64	-0.5
4,406,206	-		Echvi_3699	0.64	-2.2
4,406,206	-		Echvi_3699	0.64	-0.7
4,406,207	+		Echvi_3699	0.64	+0.6
4,406,207	+		Echvi_3699	0.64	+1.5
4,406,208	-		Echvi_3699	0.64	+3.1
4,406,208	-		Echvi_3699	0.64	-2.6
4,406,208	-		Echvi_3699	0.64	+0.3
4,406,237	+		Echvi_3699	0.68	-0.2
4,406,238	-		Echvi_3699	0.68	+0.4
4,406,312	+		Echvi_3699	0.77	+0.9
4,406,312	+		Echvi_3699	0.77	-1.7
4,406,312	+		Echvi_3699	0.77	+0.3
4,406,312	+		Echvi_3699	0.77	+1.7
4,406,312	+		Echvi_3699	0.77	+1.4
4,406,313	-		Echvi_3699	0.77	-1.2
4,406,313	-		Echvi_3699	0.77	-1.2
4,406,313	-		Echvi_3699	0.77	+2.0
4,406,313	-		Echvi_3699	0.77	+0.9
4,406,313	-		Echvi_3699	0.77	-0.6
4,406,313	-		Echvi_3699	0.77	+0.8
4,406,354	+		Echvi_3699	0.82	-1.1
4,406,354	+		Echvi_3699	0.82	-0.2
4,406,355	-		Echvi_3699	0.82	+0.1
4,406,355	-		Echvi_3699	0.82	-0.1
4,406,355	-		Echvi_3699	0.82	+0.1
4,406,355	-		Echvi_3699	0.82	-0.9
4,406,496	+				-2.2
4,406,506	+				-0.1
4,406,507	-				-0.7
4,406,507	-				+0.6
4,406,507	-				+0.7
4,406,511	+				-0.2
4,406,511	+				+1.6
4,406,511	+				+0.8
4,406,512	-				-0.2
4,406,512	-				+0.1
4,406,524	+				+1.8
4,406,546	+				-0.6
4,406,627	-				-1.0
4,406,634	-				+0.2
4,406,634	-				+1.6
4,406,643	+				-0.1
4,406,655	-				+0.5
4,406,695	+				-1.4
4,406,696	-				-0.7
4,406,696	-				+0.8
4,406,696	-				+1.5
4,406,696	-				+1.3
4,406,696	-				+0.6
4,406,696	-				-2.1
4,406,699	+				+0.6
4,406,700	-				+1.7
4,406,700	-				-1.0
4,406,700	-				+1.8
4,406,814	+		Echvi_3700	0.12	+1.6
4,406,814	+		Echvi_3700	0.12	+1.7
4,406,814	+		Echvi_3700	0.12	+3.2
4,406,815	-		Echvi_3700	0.12	-1.1
4,406,815	-		Echvi_3700	0.12	-0.4
4,406,842	+		Echvi_3700	0.13	+1.2
4,406,894	+		Echvi_3700	0.16	-1.6
4,406,894	+		Echvi_3700	0.16	-1.4
4,406,894	+		Echvi_3700	0.16	-1.6
4,406,942	+		Echvi_3700	0.18	+0.2
4,406,943	-		Echvi_3700	0.18	-0.8
4,406,943	-		Echvi_3700	0.18	+0.0
4,406,943	-		Echvi_3700	0.18	+2.6
4,406,971	+		Echvi_3700	0.19	-0.0
4,407,019	+		Echvi_3700	0.21	-1.2
4,407,019	+		Echvi_3700	0.21	+1.2
4,407,020	-		Echvi_3700	0.21	-0.1
4,407,020	-		Echvi_3700	0.21	-0.0
4,407,023	+		Echvi_3700	0.21	-0.2
4,407,023	+		Echvi_3700	0.21	+1.5
4,407,023	+		Echvi_3700	0.21	-0.4
4,407,024	-		Echvi_3700	0.21	+0.6
4,407,024	-		Echvi_3700	0.21	+0.7
4,407,051	+		Echvi_3700	0.22	+0.5
4,407,052	-		Echvi_3700	0.22	-0.8
4,407,052	-		Echvi_3700	0.22	-0.1
4,407,052	-				-2.6
4,407,153	+		Echvi_3700	0.27	+0.6
4,407,173	-		Echvi_3700	0.27	+1.5
4,407,179	+		Echvi_3700	0.28	+1.6
4,407,179	+		Echvi_3700	0.28	+1.6
4,407,181	+		Echvi_3700	0.28	-2.3
4,407,181	+		Echvi_3700	0.28	-1.9
4,407,182	-		Echvi_3700	0.28	+0.5
4,407,184	+		Echvi_3700	0.28	-2.8
4,407,185	-		Echvi_3700	0.28	-0.4
4,407,229	+		Echvi_3700	0.30	+0.5
4,407,272	-		Echvi_3700	0.32	+0.2
4,407,272	-		Echvi_3700	0.32	+0.3
4,407,297	+		Echvi_3700	0.33	-0.8
4,407,304	-		Echvi_3700	0.33	-1.1
4,407,344	-		Echvi_3700	0.35	-1.6
4,407,391	+		Echvi_3700	0.37	+0.3
4,407,392	-		Echvi_3700	0.37	+0.9
4,407,452	-		Echvi_3700	0.39	-1.7
4,407,452	-		Echvi_3700	0.39	-0.1
4,407,452	-		Echvi_3700	0.39	+1.4