Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3586

Experiment: D-Trehalose 20mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose 20mM (C)
4,249,649	+		Echvi_3585	0.57	-0.4
4,249,649	+		Echvi_3585	0.57	-1.3
4,249,650	-		Echvi_3585	0.57	+0.0
4,249,671	+		Echvi_3585	0.58	-0.5
4,249,671	+		Echvi_3585	0.58	-0.5
4,249,671	+		Echvi_3585	0.58	+0.1
4,249,703	-		Echvi_3585	0.60	-0.2
4,249,703	-		Echvi_3585	0.60	+0.4
4,249,716	-		Echvi_3585	0.61	+0.4
4,249,720	+		Echvi_3585	0.61	-2.7
4,249,847	+		Echvi_3585	0.68	+2.1
4,249,877	+		Echvi_3585	0.69	-0.6
4,249,917	-		Echvi_3585	0.72	-0.1
4,249,962	-		Echvi_3585	0.74	+0.8
4,249,962	-		Echvi_3585	0.74	-2.2
4,249,983	+		Echvi_3585	0.75	+0.6
4,250,132	+		Echvi_3585	0.83	+0.4
4,250,133	-		Echvi_3585	0.83	-2.3
4,250,143	-		Echvi_3585	0.84	-0.3
4,250,143	-		Echvi_3585	0.84	+2.0
4,250,267	+				+1.0
4,250,309	-				-0.4
4,250,400	-				+3.8
4,250,441	+				-0.7
4,250,520	+				+1.1
4,250,543	+				+1.4
4,250,543	+				-2.2
4,250,544	-				-0.9
4,250,554	+				-0.7
4,250,554	+				-1.4
4,250,554	+				-0.2
4,250,555	-				+0.0
4,250,555	-				+2.3
4,250,635	+				-0.2
4,250,686	-				-1.9
4,250,686	-				-2.7
4,250,771	+				-2.5
4,250,772	-				-0.7
4,250,853	+		Echvi_3586	0.13	-2.5
4,250,853	+		Echvi_3586	0.13	-1.5
4,250,931	-		Echvi_3586	0.18	+1.2
4,250,931	-		Echvi_3586	0.18	+0.6
4,250,950	-		Echvi_3586	0.19	-1.7
4,250,988	+		Echvi_3586	0.21	-2.1
4,250,992	+		Echvi_3586	0.22	-0.9
4,250,993	-		Echvi_3586	0.22	-2.1
4,250,993	-		Echvi_3586	0.22	+0.2
4,250,993	-		Echvi_3586	0.22	-0.3
4,250,997	+		Echvi_3586	0.22	-0.7
4,250,997	+		Echvi_3586	0.22	+0.3
4,250,997	+		Echvi_3586	0.22	+0.7
4,250,998	-		Echvi_3586	0.22	-0.2
4,250,998	-		Echvi_3586	0.22	-0.9
4,250,998	-		Echvi_3586	0.22	-0.7
4,251,000	+		Echvi_3586	0.22	-0.4
4,251,000	+		Echvi_3586	0.22	+0.7
4,251,000	+		Echvi_3586	0.22	-1.4
4,251,000	+		Echvi_3586	0.22	-0.6
4,251,001	-		Echvi_3586	0.22	-1.5
4,251,001	-		Echvi_3586	0.22	-0.1
4,251,048	+		Echvi_3586	0.25	+1.5
4,251,049	-		Echvi_3586	0.25	-0.2
4,251,087	+		Echvi_3586	0.27	-3.0
4,251,087	+		Echvi_3586	0.27	-0.1
4,251,087	+		Echvi_3586	0.27	-0.4
4,251,087	+		Echvi_3586	0.27	-0.5
4,251,087	+		Echvi_3586	0.27	-0.9
4,251,087	+		Echvi_3586	0.27	+0.3
4,251,087	+		Echvi_3586	0.27	+1.2
4,251,088	-		Echvi_3586	0.27	-0.3
4,251,088	-		Echvi_3586	0.27	-0.5
4,251,088	-		Echvi_3586	0.27	+0.4
4,251,093	+		Echvi_3586	0.28	-2.4
4,251,147	-		Echvi_3586	0.31	+0.2
4,251,147	-		Echvi_3586	0.31	+4.0
4,251,147	-		Echvi_3586	0.31	+0.5
4,251,172	-		Echvi_3586	0.32	+0.4
4,251,218	+		Echvi_3586	0.35	-1.2
4,251,218	+		Echvi_3586	0.35	-2.1
4,251,218	+		Echvi_3586	0.35	+1.2
4,251,218	+		Echvi_3586	0.35	+1.1
4,251,218	+		Echvi_3586	0.35	+0.7
4,251,218	+		Echvi_3586	0.35	-0.0
4,251,219	-		Echvi_3586	0.35	-1.7
4,251,219	-		Echvi_3586	0.35	+0.2
4,251,267	-		Echvi_3586	0.38	-0.6
4,251,315	+		Echvi_3586	0.41	-1.1
4,251,342	+		Echvi_3586	0.43	-0.2
4,251,342	+		Echvi_3586	0.43	+0.8
4,251,344	+		Echvi_3586	0.43	-0.9
4,251,346	+		Echvi_3586	0.43	+0.9
4,251,352	+		Echvi_3586	0.43	+0.3
4,251,401	+		Echvi_3586	0.46	+0.8
4,251,402	-		Echvi_3586	0.46	-0.8
4,251,414	+		Echvi_3586	0.47	+0.4
4,251,506	-		Echvi_3586	0.52	-0.8
4,251,551	+		Echvi_3586	0.55	-0.1
4,251,552	-		Echvi_3586	0.55	+0.3
4,251,689	+		Echvi_3586	0.63	-2.4
4,251,844	+		Echvi_3586	0.73	-0.5
4,251,844	+		Echvi_3586	0.73	-0.8
4,251,844	+		Echvi_3586	0.73	-1.3
4,251,844	+		Echvi_3586	0.73	+0.6
4,251,845	-		Echvi_3586	0.73	-0.2
4,251,845	-		Echvi_3586	0.73	+0.6
4,251,845	-		Echvi_3586	0.73	-2.3
4,251,845	-		Echvi_3586	0.73	-1.8
4,251,845	-		Echvi_3586	0.73	+0.1
4,251,936	-		Echvi_3586	0.78	-0.1
4,251,936	-		Echvi_3586	0.78	-3.0
4,252,005	+		Echvi_3586	0.82	+0.6
4,252,106	+		Echvi_3586	0.88	+2.2
4,252,107	-		Echvi_3586	0.88	-0.4
4,252,107	-		Echvi_3586	0.88	+1.1
4,252,157	+				-2.6
4,252,157	+				+0.9
4,252,300	+				+0.1
4,252,301	-				-1.5
4,252,339	+				-2.5
4,252,341	+				+0.1
4,252,341	+				-0.2
4,252,342	-				-2.8
4,252,342	-				-1.4
4,252,342	-				+0.6
4,252,347	-				+0.4
4,252,432	+				-0.0
4,252,432	+				+0.3
4,252,432	+				+0.9
4,252,433	-				+3.2
4,252,433	-				+0.4
4,252,435	+				-0.5
4,252,435	+				-0.3
4,252,436	-				-0.4
4,252,436	-				+1.5
4,252,438	-				-1.4
4,252,438	-				+0.2
4,252,438	-				-1.6
4,252,447	+				+0.5
4,252,448	-				-0.5
4,252,448	-				-0.4
4,252,454	-				-1.0
4,252,514	+				-0.1
4,252,514	+				-0.8
4,252,514	+				+0.5
4,252,514	+				+0.3
4,252,514	+				-0.6
4,252,515	-				-3.4
4,252,515	-				-1.1
4,252,517	+				-0.2
4,252,524	+				+0.2
4,252,524	+				+0.3
4,252,539	+				-0.7
4,252,540	-				+0.4
4,252,548	+				-0.2
4,252,549	-				+0.4
4,252,549	-				-0.2
4,252,598	+				-0.3
4,252,598	+				-1.2
4,252,603	+				+0.6
4,252,603	+				-2.5
4,252,604	-				-1.6
4,252,604	-				-0.9
4,252,605	+				+0.2
4,252,605	+				+1.0
4,252,605	+				-0.2
4,252,605	+				+0.4
4,252,606	-				+0.3
4,252,606	-				-1.0
4,252,606	-				-0.0
4,252,606	-				+2.7
4,252,606	-				-2.1
4,252,618	+				+0.4
4,252,618	+				-1.0
4,252,793	+		Echvi_3587	0.12	-0.4
4,252,829	-		Echvi_3587	0.12	-1.1
4,252,846	+		Echvi_3587	0.13	-0.1
4,253,010	+		Echvi_3587	0.17	+2.5
4,253,056	+		Echvi_3587	0.18	+0.3
4,253,154	-		Echvi_3587	0.20	-0.7
4,253,170	+		Echvi_3587	0.20	+1.1
4,253,171	-		Echvi_3587	0.20	+0.2
4,253,171	-		Echvi_3587	0.20	-0.2
4,253,195	+		Echvi_3587	0.21	+0.7
4,253,260	+		Echvi_3587	0.22	-0.8
4,253,260	+		Echvi_3587	0.22	+1.4
4,253,260	+		Echvi_3587	0.22	-1.5
4,253,261	-		Echvi_3587	0.22	-0.7
4,253,274	-		Echvi_3587	0.23	+0.4
4,253,296	+		Echvi_3587	0.23	-1.5
4,253,296	+		Echvi_3587	0.23	-0.2
4,253,297	-		Echvi_3587	0.23	+0.2