Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3490

Experiment: D-Trehalose 20mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose 20mM (C)
4,132,048	+				+0.1
4,132,048	+				-0.2
4,132,054	+				+0.3
4,132,054	+				+1.6
4,132,173	+		Echvi_3489	0.15	-0.8
4,132,213	-		Echvi_3489	0.20	-0.6
4,132,249	+		Echvi_3489	0.24	-0.4
4,132,250	-		Echvi_3489	0.24	-0.9
4,132,291	-		Echvi_3489	0.28	-0.1
4,132,302	+		Echvi_3489	0.29	+0.7
4,132,303	-		Echvi_3489	0.30	-0.2
4,132,316	+		Echvi_3489	0.31	-1.8
4,132,368	+		Echvi_3489	0.37	-1.3
4,132,397	+		Echvi_3489	0.40	+0.2
4,132,472	+		Echvi_3489	0.48	-2.0
4,132,473	-		Echvi_3489	0.48	+3.2
4,132,473	-		Echvi_3489	0.48	-0.9
4,132,473	-		Echvi_3489	0.48	-0.9
4,132,597	+		Echvi_3489	0.61	-0.3
4,132,598	-		Echvi_3489	0.61	-0.2
4,132,636	+		Echvi_3489	0.66	+0.7
4,132,636	+		Echvi_3489	0.66	-0.5
4,132,638	+		Echvi_3489	0.66	+0.9
4,132,638	+		Echvi_3489	0.66	+0.8
4,132,638	+		Echvi_3489	0.66	+0.6
4,132,638	+		Echvi_3489	0.66	-0.8
4,132,638	+		Echvi_3489	0.66	-2.4
4,132,638	+		Echvi_3489	0.66	+1.2
4,132,638	+		Echvi_3489	0.66	+0.1
4,132,639	-		Echvi_3489	0.66	+0.1
4,132,669	-		Echvi_3489	0.69	+0.9
4,132,719	+		Echvi_3489	0.75	+0.5
4,132,862	+				+1.3
4,132,934	+				-0.1
4,132,984	+				+0.1
4,132,986	+				+0.6
4,132,987	-				+0.4
4,132,987	-				+1.1
4,132,987	-				+0.3
4,133,000	+				-0.7
4,133,021	+				-1.1
4,133,022	-				-0.9
4,133,081	+				-0.4
4,133,082	-				+2.2
4,133,082	-				+1.2
4,133,085	+				+3.2
4,133,085	+				-1.4
4,133,085	+				-0.4
4,133,085	+				+0.3
4,133,085	+				+2.5
4,133,086	-				+0.2
4,133,086	-				-0.8
4,133,086	-				-1.4
4,133,267	+		Echvi_3490	0.20	-0.9
4,133,267	+		Echvi_3490	0.20	+0.3
4,133,268	-		Echvi_3490	0.20	+0.5
4,133,268	-		Echvi_3490	0.20	+0.5
4,133,335	+		Echvi_3490	0.25	-0.5
4,133,424	+		Echvi_3490	0.32	-0.4
4,133,425	-		Echvi_3490	0.32	+0.8
4,133,425	-		Echvi_3490	0.32	+0.1
4,133,451	-		Echvi_3490	0.34	+0.9
4,133,470	-		Echvi_3490	0.35	-2.5
4,133,472	+		Echvi_3490	0.36	+0.3
4,133,472	+		Echvi_3490	0.36	-1.0
4,133,573	-		Echvi_3490	0.43	+0.4
4,133,611	+		Echvi_3490	0.46	+0.3
4,133,612	-		Echvi_3490	0.46	-0.9
4,133,634	+		Echvi_3490	0.48	-0.5
4,133,634	+		Echvi_3490	0.48	-0.1
4,133,745	+		Echvi_3490	0.57	-1.4
4,133,747	+		Echvi_3490	0.57	+0.4
4,133,748	-		Echvi_3490	0.57	-0.1
4,133,748	-		Echvi_3490	0.57	+0.0
4,133,774	-		Echvi_3490	0.59	+0.0
4,133,774	-		Echvi_3490	0.59	-0.0
4,133,810	+		Echvi_3490	0.62	+0.1
4,133,811	-		Echvi_3490	0.62	+1.3
4,133,889	+		Echvi_3490	0.68	+0.8
4,133,890	-		Echvi_3490	0.68	+1.4
4,133,894	-		Echvi_3490	0.68	+1.4
4,133,920	-		Echvi_3490	0.70	-0.0
4,133,929	-		Echvi_3490	0.71	+1.3
4,133,929	-		Echvi_3490	0.71	+0.3
4,133,929	-		Echvi_3490	0.71	-1.2
4,133,932	+		Echvi_3490	0.71	+2.8
4,133,932	+		Echvi_3490	0.71	+0.5
4,133,933	-		Echvi_3490	0.71	+1.1
4,133,933	-		Echvi_3490	0.71	-0.2
4,133,933	-		Echvi_3490	0.71	-3.0
4,133,933	-		Echvi_3490	0.71	-2.0
4,133,933	-		Echvi_3490	0.71	-1.0
4,134,057	+		Echvi_3490	0.81	+0.7
4,134,227	+				-1.8
4,134,227	+				-0.2
4,134,227	+				-0.4
4,134,227	+				-0.4
4,134,228	-				+0.1
4,134,228	-				+1.2
4,134,228	-				+0.0
4,134,228	-				+0.8
4,134,232	+				-0.3
4,134,232	+				+0.1
4,134,283	-				+0.4
4,134,283	-				-1.1
4,134,283	-				+0.9
4,134,298	+				+0.3
4,134,298	+				-0.7
4,134,304	-				+0.2
4,134,349	+				+0.8
4,134,360	+				-0.5
4,134,383	-				+0.8
4,134,411	-				-1.1
4,134,411	-				+0.3
4,134,411	-				-1.7
4,134,439	-				-1.7
4,134,572	+				+1.2
4,134,572	+				+0.2
4,134,573	-				-1.1
4,134,575	+				-0.9
4,134,586	-				-0.4
4,134,608	+				-0.0
4,134,616	-				+1.3
4,134,616	-				-0.3
4,134,661	-				-2.0
4,134,664	+				+0.6
4,134,664	+				+0.6
4,134,665	-				-0.7
4,134,665	-				+2.8
4,134,670	-				+0.6
4,134,670	-				+0.9
4,134,670	-				+0.5
4,134,685	+				+0.9
4,134,686	-				-0.2
4,134,687	+				+0.2
4,134,687	+				+0.7
4,134,688	-				-0.5
4,134,688	-				+0.1
4,134,688	-				+0.3
4,134,692	+				-1.6
4,134,692	+				-1.6
4,134,693	-				+1.5
4,134,693	-				+1.3
4,134,739	+				+1.4
4,134,740	-				-0.4
4,134,746	+				+2.1
4,134,813	-				-0.2
4,134,822	+				-0.7
4,134,823	-				-0.3
4,134,824	+				+0.1
4,134,825	-				+0.5
4,134,838	+				-0.5
4,134,839	-				+0.8
4,134,871	+				+0.7
4,134,896	-		Echvi_3491	0.11	-0.8
4,134,896	-		Echvi_3491	0.11	+1.3
4,134,899	+		Echvi_3491	0.11	+0.1
4,134,899	+		Echvi_3491	0.11	-0.4
4,134,900	-		Echvi_3491	0.11	-0.6
4,134,908	-		Echvi_3491	0.12	-1.3
4,134,917	+		Echvi_3491	0.12	+1.0
4,134,917	+		Echvi_3491	0.12	+0.4
4,134,918	-		Echvi_3491	0.12	-0.7
4,134,928	-		Echvi_3491	0.13	+0.1
4,134,950	+		Echvi_3491	0.14	-0.2
4,134,951	-		Echvi_3491	0.14	-1.3
4,134,985	+		Echvi_3491	0.16	+0.6
4,134,985	+		Echvi_3491	0.16	-0.9
4,135,010	+		Echvi_3491	0.17	+0.9
4,135,010	+		Echvi_3491	0.17	+2.0
4,135,010	+		Echvi_3491	0.17	+2.5
4,135,019	+		Echvi_3491	0.17	-0.8
4,135,019	+		Echvi_3491	0.17	+1.0
4,135,020	-		Echvi_3491	0.18	+0.5
4,135,020	-		Echvi_3491	0.18	+0.2
4,135,100	+		Echvi_3491	0.22	-0.8
4,135,100	+		Echvi_3491	0.22	-0.1
4,135,115	+		Echvi_3491	0.22	-1.4
4,135,128	+		Echvi_3491	0.23	-2.5
4,135,129	-		Echvi_3491	0.23	-1.1
4,135,129	-		Echvi_3491	0.23	-1.6
4,135,194	+		Echvi_3491	0.26	+0.3
4,135,194	+		Echvi_3491	0.26	+0.6
4,135,202	+		Echvi_3491	0.27	+0.4
4,135,264	+		Echvi_3491	0.30	+0.6
4,135,264	+		Echvi_3491	0.30	+0.2
4,135,268	-		Echvi_3491	0.30	+0.5
4,135,268	-		Echvi_3491	0.30	-0.2
4,135,274	+		Echvi_3491	0.30	+0.6
4,135,285	-		Echvi_3491	0.31	+0.2