Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3169

Experiment: D-Trehalose 20mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose 20mM (C)
3,774,217	+		Echvi_3167	0.62	+2.2
3,774,218	-		Echvi_3167	0.62	-0.1
3,774,218	-		Echvi_3167	0.62	-0.0
3,774,219	+		Echvi_3167	0.63	-1.0
3,774,219	+		Echvi_3167	0.63	+0.1
3,774,220	-				-1.6
3,774,220	-		Echvi_3167	0.63	-0.4
3,774,225	+		Echvi_3167	0.63	+0.7
3,774,225	+		Echvi_3167	0.63	+1.2
3,774,226	-		Echvi_3167	0.63	+0.2
3,774,255	+		Echvi_3167	0.67	-0.1
3,774,282	+		Echvi_3167	0.70	-0.6
3,774,282	+		Echvi_3167	0.70	+0.1
3,774,283	-		Echvi_3167	0.70	-1.1
3,774,283	-		Echvi_3167	0.70	-0.8
3,774,283	-		Echvi_3167	0.70	+0.2
3,774,284	+		Echvi_3167	0.70	-0.5
3,774,284	+		Echvi_3167	0.70	-0.2
3,774,284	+		Echvi_3167	0.70	+0.3
3,774,285	-		Echvi_3167	0.70	+0.6
3,774,285	-		Echvi_3167	0.70	+4.8
3,774,285	-		Echvi_3167	0.70	-2.3
3,774,285	-		Echvi_3167	0.70	-0.7
3,774,285	-		Echvi_3167	0.70	-0.1
3,774,285	-		Echvi_3167	0.70	+0.9
3,774,285	-		Echvi_3167	0.70	-0.4
3,774,285	-		Echvi_3167	0.70	+2.2
3,774,286	+		Echvi_3167	0.70	-1.0
3,774,286	+		Echvi_3167	0.70	-0.5
3,774,286	+		Echvi_3167	0.70	-0.7
3,774,287	-		Echvi_3167	0.70	-0.7
3,774,287	-		Echvi_3167	0.70	+1.5
3,774,287	-		Echvi_3167	0.70	+0.4
3,774,287	-		Echvi_3167	0.70	+1.2
3,774,287	-		Echvi_3167	0.70	+0.9
3,774,287	-		Echvi_3167	0.70	+0.5
3,774,295	+		Echvi_3167	0.71	+2.5
3,774,310	-		Echvi_3167	0.73	+0.4
3,774,316	+		Echvi_3167	0.73	-0.2
3,774,316	+		Echvi_3167	0.73	+1.7
3,774,317	-		Echvi_3167	0.73	+0.8
3,774,428	-		Echvi_3167	0.86	-0.1
3,774,469	+				-1.6
3,774,470	-				+1.5
3,774,470	-				-0.4
3,774,470	-				-0.5
3,774,511	+				+0.9
3,774,511	+				-0.1
3,774,512	-				+0.6
3,774,512	-				-0.2
3,774,512	-				+0.4
3,774,570	-				+0.7
3,774,575	+				+0.7
3,774,575	+				+0.9
3,774,580	-				+1.0
3,774,621	+		Echvi_3168	0.11	+0.4
3,774,733	+		Echvi_3168	0.28	+1.9
3,774,733	+		Echvi_3168	0.28	+1.0
3,774,746	+		Echvi_3168	0.30	+0.2
3,774,790	+		Echvi_3168	0.37	+2.0
3,774,791	-		Echvi_3168	0.37	-0.1
3,774,795	+		Echvi_3168	0.38	+2.2
3,774,795	+		Echvi_3168	0.38	-0.4
3,774,830	+		Echvi_3168	0.43	+0.3
3,774,831	-		Echvi_3168	0.44	-0.4
3,774,831	-		Echvi_3168	0.44	+1.2
3,774,836	+		Echvi_3168	0.44	+1.0
3,774,840	-		Echvi_3168	0.45	-1.0
3,774,882	+		Echvi_3168	0.51	+0.3
3,774,883	-		Echvi_3168	0.52	-0.0
3,774,883	-		Echvi_3168	0.52	-0.7
3,774,936	+		Echvi_3168	0.60	+0.0
3,774,937	-		Echvi_3168	0.60	+4.0
3,774,938	+		Echvi_3168	0.60	-1.1
3,774,939	-		Echvi_3168	0.60	-1.2
3,774,999	-		Echvi_3168	0.70	+1.7
3,775,007	-		Echvi_3168	0.71	-0.3
3,775,053	-		Echvi_3168	0.78	+0.2
3,775,057	-		Echvi_3168	0.79	-0.8
3,775,066	+		Echvi_3168	0.80	-2.2
3,775,066	+		Echvi_3168	0.80	-2.6
3,775,099	+		Echvi_3168	0.85	-0.6
3,775,101	+		Echvi_3168	0.85	-0.2
3,775,167	+				-0.1
3,775,167	+				-0.4
3,775,189	-				+0.5
3,775,211	+				+1.2
3,775,211	+				+0.8
3,775,256	+		Echvi_3169	0.18	-0.4
3,775,257	-		Echvi_3169	0.19	-1.8
3,775,258	+		Echvi_3169	0.19	-0.4
3,775,258	+		Echvi_3169	0.19	-1.4
3,775,333	+		Echvi_3169	0.45	-0.9
3,775,334	-		Echvi_3169	0.45	-0.4
3,775,363	+		Echvi_3169	0.55	-0.0
3,775,364	-		Echvi_3169	0.55	-0.2
3,775,400	-		Echvi_3169	0.67	-0.7
3,775,474	+				+0.1
3,775,500	+				+0.5
3,775,501	-				-0.2
3,775,513	-				+0.8
3,775,558	+				+1.4
3,775,603	+				+4.7
3,775,676	-				-1.0
3,775,696	+				-1.2
3,775,758	+		Echvi_3170	0.12	+1.6
3,775,802	+		Echvi_3170	0.14	+0.7
3,775,803	-		Echvi_3170	0.14	+0.5
3,775,915	+		Echvi_3170	0.19	-2.7
3,775,916	-		Echvi_3170	0.19	+0.4
3,775,934	+		Echvi_3170	0.20	-0.1
3,775,942	+		Echvi_3170	0.20	+1.5
3,775,945	+		Echvi_3170	0.20	+1.2
3,775,945	+		Echvi_3170	0.20	-0.5
3,775,946	-		Echvi_3170	0.21	-0.5
3,775,957	-		Echvi_3170	0.21	-3.0
3,775,992	+		Echvi_3170	0.23	-0.2
3,775,993	-		Echvi_3170	0.23	-1.9
3,775,993	-		Echvi_3170	0.23	+0.9
3,775,993	-		Echvi_3170	0.23	+3.0
3,775,993	-		Echvi_3170	0.23	-0.9
3,776,002	+		Echvi_3170	0.23	-1.6
3,776,002	+		Echvi_3170	0.23	+0.1
3,776,002	+		Echvi_3170	0.23	+3.0
3,776,003	-		Echvi_3170	0.23	+0.2
3,776,003	-		Echvi_3170	0.23	-0.5
3,776,003	-		Echvi_3170	0.23	-1.1
3,776,003	-		Echvi_3170	0.23	-0.8
3,776,003	-		Echvi_3170	0.23	-0.8
3,776,004	+		Echvi_3170	0.23	-0.0
3,776,011	-		Echvi_3170	0.24	-1.0
3,776,083	+		Echvi_3170	0.27	-0.6
3,776,120	-		Echvi_3170	0.29	-1.1
3,776,123	-		Echvi_3170	0.29	+0.7
3,776,123	-		Echvi_3170	0.29	+0.4
3,776,151	+		Echvi_3170	0.30	+0.2
3,776,152	-		Echvi_3170	0.30	+0.5
3,776,206	+		Echvi_3170	0.33	-0.5
3,776,207	-		Echvi_3170	0.33	-1.4
3,776,207	-		Echvi_3170	0.33	-0.9
3,776,207	-		Echvi_3170	0.33	-0.8
3,776,208	+		Echvi_3170	0.33	-2.3
3,776,208	+		Echvi_3170	0.33	-0.5
3,776,208	+		Echvi_3170	0.33	+2.2
3,776,208	+		Echvi_3170	0.33	-0.2
3,776,208	+		Echvi_3170	0.33	-2.0
3,776,211	+		Echvi_3170	0.33	+0.5
3,776,245	+		Echvi_3170	0.35	-0.3
3,776,291	-		Echvi_3170	0.37	-0.5
3,776,305	-		Echvi_3170	0.38	-0.0
3,776,317	+		Echvi_3170	0.38	+0.2
3,776,317	+		Echvi_3170	0.38	-1.0
3,776,318	-		Echvi_3170	0.38	-1.6
3,776,322	+		Echvi_3170	0.38	+1.7
3,776,322	+		Echvi_3170	0.38	-0.3
3,776,322	+		Echvi_3170	0.38	-2.1
3,776,354	-		Echvi_3170	0.40	+0.5
3,776,450	+		Echvi_3170	0.45	-0.4
3,776,450	+		Echvi_3170	0.45	-0.3
3,776,450	+		Echvi_3170	0.45	+0.6
3,776,450	+		Echvi_3170	0.45	+1.6
3,776,450	+		Echvi_3170	0.45	-3.2
3,776,450	+		Echvi_3170	0.45	-0.2
3,776,450	+		Echvi_3170	0.45	-1.1
3,776,451	-		Echvi_3170	0.45	+0.1
3,776,451	-		Echvi_3170	0.45	+0.8