Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3166

Experiment: D-Trehalose 20mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose 20mM (C)
3,771,173	+		Echvi_3165	0.31	-2.0
3,771,174	-		Echvi_3165	0.31	+0.4
3,771,174	-		Echvi_3165	0.31	+1.2
3,771,266	+		Echvi_3165	0.37	-1.6
3,771,266	+		Echvi_3165	0.37	+1.0
3,771,267	-		Echvi_3165	0.37	-0.1
3,771,267	-		Echvi_3165	0.37	+0.0
3,771,267	-		Echvi_3165	0.37	+0.9
3,771,280	+		Echvi_3165	0.38	+0.4
3,771,280	+		Echvi_3165	0.38	+0.4
3,771,281	-		Echvi_3165	0.38	+1.2
3,771,281	-		Echvi_3165	0.38	+0.0
3,771,282	+		Echvi_3165	0.38	+0.2
3,771,283	-		Echvi_3165	0.38	-0.8
3,771,283	-		Echvi_3165	0.38	-0.4
3,771,334	-		Echvi_3165	0.42	+0.4
3,771,334	-		Echvi_3165	0.42	+0.6
3,771,337	-		Echvi_3165	0.42	-1.8
3,771,372	+		Echvi_3165	0.45	+0.4
3,771,373	-		Echvi_3165	0.45	-1.1
3,771,375	+		Echvi_3165	0.45	+0.4
3,771,375	+		Echvi_3165	0.45	+0.1
3,771,376	-		Echvi_3165	0.45	-0.1
3,771,376	-		Echvi_3165	0.45	-0.4
3,771,379	+		Echvi_3165	0.45	-3.7
3,771,392	+		Echvi_3165	0.46	-1.2
3,771,421	-		Echvi_3165	0.49	-0.6
3,771,577	-		Echvi_3165	0.60	-0.0
3,771,619	+		Echvi_3165	0.63	-1.5
3,771,619	+		Echvi_3165	0.63	+0.1
3,771,619	+		Echvi_3165	0.63	-0.3
3,771,620	-		Echvi_3165	0.63	-3.2
3,771,620	-		Echvi_3165	0.63	-1.2
3,771,620	-		Echvi_3165	0.63	-2.0
3,771,679	+		Echvi_3165	0.67	+1.1
3,771,680	-		Echvi_3165	0.67	-0.9
3,771,695	+		Echvi_3165	0.68	-1.9
3,771,695	+		Echvi_3165	0.68	+0.5
3,771,714	+		Echvi_3165	0.70	+0.7
3,771,715	-		Echvi_3165	0.70	-0.9
3,771,781	+		Echvi_3165	0.75	+0.2
3,771,815	-		Echvi_3165	0.77	-0.7
3,771,831	+		Echvi_3165	0.78	+0.5
3,771,837	-		Echvi_3165	0.79	+0.3
3,771,992	-				-0.6
3,772,023	+				+0.7
3,772,077	-				-0.7
3,772,105	-				+1.4
3,772,105	-				+1.3
3,772,105	-				-0.1
3,772,105	-				+0.4
3,772,106	+				-2.1
3,772,107	-				-0.3
3,772,123	-				+2.2
3,772,173	+				+0.3
3,772,196	+				-1.0
3,772,196	+				-0.2
3,772,215	+				+0.6
3,772,215	+				-1.0
3,772,215	+				-0.4
3,772,220	+				+0.6
3,772,220	+				-0.1
3,772,220	+				+0.0
3,772,220	+				-0.2
3,772,220	+				-1.1
3,772,278	+				-0.8
3,772,297	+				-0.2
3,772,319	-		Echvi_3166	0.11	-0.1
3,772,319	-		Echvi_3166	0.11	+1.1
3,772,337	-		Echvi_3166	0.12	-0.2
3,772,405	+		Echvi_3166	0.17	-0.0
3,772,412	+		Echvi_3166	0.17	-0.3
3,772,413	-		Echvi_3166	0.17	+0.8
3,772,413	-		Echvi_3166	0.17	-0.4
3,772,433	-		Echvi_3166	0.19	+0.6
3,772,435	-		Echvi_3166	0.19	+0.8
3,772,484	+		Echvi_3166	0.22	-1.1
3,772,487	-		Echvi_3166	0.22	-0.6
3,772,487	-		Echvi_3166	0.22	+0.0
3,772,487	-		Echvi_3166	0.22	-0.2
3,772,494	-		Echvi_3166	0.23	+1.4
3,772,494	-		Echvi_3166	0.23	-0.6
3,772,555	+		Echvi_3166	0.27	-1.5
3,772,556	-		Echvi_3166	0.27	+0.6
3,772,556	-		Echvi_3166	0.27	+0.5
3,772,596	+		Echvi_3166	0.30	+0.3
3,772,596	+		Echvi_3166	0.30	-1.5
3,772,597	-		Echvi_3166	0.30	-0.7
3,772,606	+		Echvi_3166	0.30	+1.0
3,772,675	+		Echvi_3166	0.35	-3.2
3,772,675	+		Echvi_3166	0.35	+0.1
3,772,675	+		Echvi_3166	0.35	+0.7
3,772,676	-		Echvi_3166	0.35	+1.2
3,772,676	-		Echvi_3166	0.35	-0.2
3,772,696	+		Echvi_3166	0.36	+1.0
3,772,696	+		Echvi_3166	0.36	-0.3
3,772,741	+		Echvi_3166	0.39	+0.1
3,772,742	-		Echvi_3166	0.39	+1.6
3,772,742	-		Echvi_3166	0.39	+1.6
3,772,742	-		Echvi_3166	0.39	+0.7
3,772,742	-		Echvi_3166	0.39	+3.8
3,772,742	-		Echvi_3166	0.39	-1.1
3,772,742	-		Echvi_3166	0.39	-0.7
3,772,742	-		Echvi_3166	0.39	+1.2
3,772,745	-		Echvi_3166	0.40	-1.2
3,772,745	-		Echvi_3166	0.40	-0.5
3,772,795	+		Echvi_3166	0.43	-0.4
3,772,796	-		Echvi_3166	0.43	+1.1
3,772,796	-		Echvi_3166	0.43	+0.2
3,772,807	-		Echvi_3166	0.44	+2.1
3,772,849	-		Echvi_3166	0.46	-2.0
3,772,849	-		Echvi_3166	0.46	+0.6
3,772,896	+		Echvi_3166	0.50	+0.2
3,772,974	+		Echvi_3166	0.55	+0.6
3,772,975	-		Echvi_3166	0.55	-3.2
3,772,982	-		Echvi_3166	0.55	-0.2
3,773,002	+		Echvi_3166	0.57	-1.0
3,773,002	+		Echvi_3166	0.57	-1.6
3,773,118	+		Echvi_3166	0.64	+1.8
3,773,176	-		Echvi_3166	0.68	+1.2
3,773,184	+		Echvi_3166	0.69	+0.5
3,773,185	-		Echvi_3166	0.69	+1.4
3,773,188	+		Echvi_3166	0.69	-0.3
3,773,188	+		Echvi_3166	0.69	-0.8
3,773,188	+		Echvi_3166	0.69	-1.4
3,773,189	-		Echvi_3166	0.69	+0.4
3,773,189	-		Echvi_3166	0.69	-0.1
3,773,189	-		Echvi_3166	0.69	-0.4
3,773,189	-		Echvi_3166	0.69	-0.4
3,773,190	+		Echvi_3166	0.69	+0.5
3,773,268	+		Echvi_3166	0.74	+2.0
3,773,287	-		Echvi_3166	0.76	+0.1
3,773,317	+		Echvi_3166	0.78	+0.8
3,773,318	-		Echvi_3166	0.78	+1.1
3,773,406	-		Echvi_3166	0.83	-0.7
3,773,407	+		Echvi_3166	0.84	-0.1
3,773,536	-				-3.7
3,773,565	+				+1.2
3,773,565	+				-0.7
3,773,566	-				-0.0
3,773,567	+				-0.7
3,773,568	-				-0.1
3,773,568	-				+0.4
3,773,569	+				-0.9
3,773,569	+				-2.0
3,773,574	+				+0.4
3,773,574	+				-2.3
3,773,574	+				+0.9
3,773,575	-				+0.7
3,773,575	-				-0.3
3,773,575	-				-0.0
3,773,576	+				-0.3
3,773,576	+				+1.0
3,773,576	+				+0.7
3,773,577	-				-0.5
3,773,577	-				-0.1
3,773,641	-				-0.1
3,773,641	-				+2.5
3,773,641	-				-0.1
3,773,641	-				-0.7
3,773,641	-				-2.6
3,773,645	-				+0.5
3,773,673	+				-0.9
3,773,673	+				+1.4
3,773,709	+				+0.5
3,773,709	+				-0.2
3,773,780	-		Echvi_3167	0.13	+0.2
3,773,785	+		Echvi_3167	0.14	+0.9
3,773,786	-		Echvi_3167	0.14	-0.0
3,773,786	-		Echvi_3167	0.14	-1.1
3,773,786	-		Echvi_3167	0.14	-1.5
3,773,786	-		Echvi_3167	0.14	+1.2
3,773,791	-		Echvi_3167	0.15	-0.8
3,773,791	-		Echvi_3167	0.15	-0.1
3,773,817	+		Echvi_3167	0.18	+1.0
3,773,818	-		Echvi_3167	0.18	+0.8
3,773,905	+		Echvi_3167	0.27	-0.2
3,773,917	-		Echvi_3167	0.29	+2.6
3,773,925	-		Echvi_3167	0.30	-0.2
3,773,934	-		Echvi_3167	0.31	-0.0
3,773,935	+		Echvi_3167	0.31	+0.1
3,773,956	+		Echvi_3167	0.33	+0.1
3,773,957	-		Echvi_3167	0.33	-0.5
3,774,017	-		Echvi_3167	0.40	+1.0
3,774,022	+		Echvi_3167	0.40	+0.5
3,774,022	+		Echvi_3167	0.40	-2.5
3,774,042	+		Echvi_3167	0.43	+0.4
3,774,042	+		Echvi_3167	0.43	-0.5
3,774,042	+		Echvi_3167	0.43	-0.6
3,774,043	-		Echvi_3167	0.43	-0.6
3,774,046	+		Echvi_3167	0.43	-0.5
3,774,047	-		Echvi_3167	0.43	-0.0
3,774,047	-		Echvi_3167	0.43	-0.6
3,774,047	-		Echvi_3167	0.43	-0.8
3,774,052	+		Echvi_3167	0.44	-1.1
3,774,071	+		Echvi_3167	0.46	-1.6
3,774,217	+		Echvi_3167	0.62	+2.2
3,774,218	-		Echvi_3167	0.62	-0.1
3,774,218	-		Echvi_3167	0.62	-0.0
3,774,219	+		Echvi_3167	0.63	-1.0
3,774,219	+		Echvi_3167	0.63	+0.1
3,774,220	-				-1.6
3,774,220	-		Echvi_3167	0.63	-0.4
3,774,225	+		Echvi_3167	0.63	+0.7
3,774,225	+		Echvi_3167	0.63	+1.2
3,774,226	-		Echvi_3167	0.63	+0.2
3,774,255	+		Echvi_3167	0.67	-0.1
3,774,282	+		Echvi_3167	0.70	-0.6
3,774,282	+		Echvi_3167	0.70	+0.1
3,774,283	-		Echvi_3167	0.70	-1.1
3,774,283	-		Echvi_3167	0.70	-0.8
3,774,283	-		Echvi_3167	0.70	+0.2
3,774,284	+		Echvi_3167	0.70	-0.5
3,774,284	+		Echvi_3167	0.70	-0.2
3,774,284	+		Echvi_3167	0.70	+0.3
3,774,285	-		Echvi_3167	0.70	+0.6
3,774,285	-		Echvi_3167	0.70	+4.8
3,774,285	-		Echvi_3167	0.70	-2.3
3,774,285	-		Echvi_3167	0.70	-0.7
3,774,285	-		Echvi_3167	0.70	-0.1
3,774,285	-		Echvi_3167	0.70	+0.9
3,774,285	-		Echvi_3167	0.70	-0.4
3,774,285	-		Echvi_3167	0.70	+2.2
3,774,286	+		Echvi_3167	0.70	-1.0
3,774,286	+		Echvi_3167	0.70	-0.5
3,774,286	+		Echvi_3167	0.70	-0.7
3,774,287	-		Echvi_3167	0.70	-0.7
3,774,287	-		Echvi_3167	0.70	+1.5
3,774,287	-		Echvi_3167	0.70	+0.4
3,774,287	-		Echvi_3167	0.70	+1.2
3,774,287	-		Echvi_3167	0.70	+0.9
3,774,287	-		Echvi_3167	0.70	+0.5
3,774,295	+		Echvi_3167	0.71	+2.5
3,774,310	-		Echvi_3167	0.73	+0.4
3,774,316	+		Echvi_3167	0.73	-0.2
3,774,316	+		Echvi_3167	0.73	+1.7
3,774,317	-		Echvi_3167	0.73	+0.8
3,774,428	-		Echvi_3167	0.86	-0.1
3,774,469	+				-1.6
3,774,470	-				+1.5
3,774,470	-				-0.4
3,774,470	-				-0.5
3,774,511	+				+0.9
3,774,511	+				-0.1
3,774,512	-				+0.6
3,774,512	-				-0.2
3,774,512	-				+0.4
3,774,570	-				+0.7
3,774,575	+				+0.7
3,774,575	+				+0.9
3,774,580	-				+1.0
3,774,621	+		Echvi_3168	0.11	+0.4