Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3024

Experiment: D-Trehalose 20mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose 20mM (C)
3,611,760	+		Echvi_3023	0.74	-0.7
3,611,770	+		Echvi_3023	0.74	-0.9
3,611,881	-		Echvi_3023	0.79	-0.1
3,611,959	+		Echvi_3023	0.82	+1.0
3,611,960	-		Echvi_3023	0.82	-0.5
3,611,979	+		Echvi_3023	0.83	+0.5
3,611,982	+		Echvi_3023	0.83	+2.3
3,611,986	-		Echvi_3023	0.83	-2.3
3,611,994	+		Echvi_3023	0.84	+0.9
3,611,997	+		Echvi_3023	0.84	-1.4
3,612,041	+		Echvi_3023	0.86	-0.9
3,612,091	-		Echvi_3023	0.88	-1.1
3,612,091	-		Echvi_3023	0.88	-1.5
3,612,140	+				-0.7
3,612,141	-				-0.9
3,612,224	+				+1.2
3,612,224	+				+1.3
3,612,274	+				-1.5
3,612,275	-				-0.6
3,612,292	+				+0.7
3,612,344	-				+1.4
3,612,344	-				-0.5
3,612,349	-				-0.5
3,612,380	+				-2.7
3,612,380	+				-0.3
3,612,464	-				-3.2
3,612,464	-				+0.4
3,612,478	+				-0.6
3,612,483	+				+0.4
3,612,483	+				+0.2
3,612,483	+				-0.8
3,612,483	+				-0.5
3,612,484	-				-0.7
3,612,484	-				-0.6
3,612,484	-				-1.2
3,612,484	-				-1.0
3,612,500	-				+0.3
3,612,500	-				-0.8
3,612,521	+				-1.1
3,612,544	-				+2.0
3,612,554	-				+0.4
3,612,560	+				-1.2
3,612,560	+				-1.0
3,612,560	+				+1.7
3,612,564	-				+0.3
3,612,564	-				+1.5
3,612,578	+				+0.2
3,612,583	+				-0.6
3,612,584	-				+0.5
3,612,606	+				+0.8
3,612,606	+				-3.0
3,612,607	-				+2.3
3,612,615	+				-0.5
3,612,616	-				-0.0
3,612,618	-				-0.8
3,612,652	-				+2.3
3,612,656	-				-2.0
3,612,667	+				-0.3
3,612,667	+				-3.4
3,612,680	+				-0.7
3,612,681	-				+0.5
3,612,681	-				+0.5
3,612,707	-				+0.2
3,612,709	-				-2.6
3,612,709	-				-1.0
3,612,711	-				-0.6
3,612,711	-				+0.4
3,612,711	-				+0.3
3,612,727	+				+1.1
3,612,761	+				+0.6
3,612,761	+				-2.2
3,612,844	-				-1.3
3,612,864	+				-0.3
3,612,879	-				+0.3
3,612,886	+		Echvi_3024	0.10	-0.3
3,612,887	-		Echvi_3024	0.10	+0.1
3,612,945	+		Echvi_3024	0.12	+0.5
3,612,948	+		Echvi_3024	0.12	-2.0
3,612,949	-		Echvi_3024	0.12	+0.3
3,612,949	-		Echvi_3024	0.12	+0.8
3,612,956	-		Echvi_3024	0.13	+1.0
3,612,991	+		Echvi_3024	0.14	+0.4
3,612,991	+		Echvi_3024	0.14	-0.2
3,612,992	-		Echvi_3024	0.14	-0.0
3,612,994	-		Echvi_3024	0.14	-0.3
3,613,007	-		Echvi_3024	0.15	+0.1
3,613,007	-		Echvi_3024	0.15	+0.6
3,613,010	+		Echvi_3024	0.15	+0.2
3,613,010	+		Echvi_3024	0.15	+0.3
3,613,010	+		Echvi_3024	0.15	+0.7
3,613,011	-		Echvi_3024	0.15	+0.4
3,613,011	-		Echvi_3024	0.15	-3.1
3,613,011	-		Echvi_3024	0.15	+0.4
3,613,040	-		Echvi_3024	0.16	+0.9
3,613,076	-		Echvi_3024	0.17	-1.1
3,613,087	+		Echvi_3024	0.17	+0.8
3,613,088	-		Echvi_3024	0.17	-1.4
3,613,232	+		Echvi_3024	0.23	+0.7
3,613,232	+		Echvi_3024	0.23	+1.9
3,613,233	-		Echvi_3024	0.23	-0.1
3,613,233	-		Echvi_3024	0.23	-0.0
3,613,233	-		Echvi_3024	0.23	-1.0
3,613,405	-		Echvi_3024	0.29	-1.3
3,613,415	+		Echvi_3024	0.29	+0.3
3,613,416	-		Echvi_3024	0.29	-1.3
3,613,426	+				+0.3
3,613,472	+		Echvi_3024	0.31	-1.7
3,613,554	+		Echvi_3024	0.34	+0.5
3,613,554	+		Echvi_3024	0.34	+0.6
3,613,555	-		Echvi_3024	0.34	+0.3
3,613,576	+		Echvi_3024	0.35	+1.0
3,613,576	+		Echvi_3024	0.35	-0.6
3,613,610	+		Echvi_3024	0.36	+1.2
3,613,642	-		Echvi_3024	0.37	-0.2
3,613,645	+		Echvi_3024	0.38	-1.8
3,613,718	-		Echvi_3024	0.40	+0.3
3,613,729	+		Echvi_3024	0.41	+1.7
3,613,729	+		Echvi_3024	0.41	-1.7
3,613,762	+		Echvi_3024	0.42	-0.2
3,613,763	-		Echvi_3024	0.42	+1.7
3,613,794	-		Echvi_3024	0.43	-0.6
3,613,818	-		Echvi_3024	0.44	-1.0
3,613,824	+		Echvi_3024	0.44	+0.3
3,613,836	-		Echvi_3024	0.44	-0.0
3,613,864	+		Echvi_3024	0.45	-0.2
3,613,864	+		Echvi_3024	0.45	+0.2
3,613,867	-		Echvi_3024	0.46	+2.9
3,613,867	-		Echvi_3024	0.46	-0.1
3,613,884	+		Echvi_3024	0.46	-0.1
3,614,053	-		Echvi_3024	0.52	+0.5
3,614,053	-		Echvi_3024	0.52	+0.4
3,614,056	+		Echvi_3024	0.52	-1.3
3,614,057	-		Echvi_3024	0.52	+1.9
3,614,137	-		Echvi_3024	0.55	-1.3
3,614,137	-		Echvi_3024	0.55	+1.7
3,614,138	+		Echvi_3024	0.55	+0.4
3,614,138	+		Echvi_3024	0.55	-0.5
3,614,138	+		Echvi_3024	0.55	-0.7
3,614,138	+		Echvi_3024	0.55	+0.2
3,614,138	+		Echvi_3024	0.55	-0.1
3,614,138	+		Echvi_3024	0.55	+0.3
3,614,139	-		Echvi_3024	0.55	-2.2
3,614,139	-		Echvi_3024	0.55	-1.9
3,614,139	-		Echvi_3024	0.55	-0.7
3,614,204	-		Echvi_3024	0.58	+0.4
3,614,206	+		Echvi_3024	0.58	+0.7
3,614,206	+		Echvi_3024	0.58	-0.1
3,614,206	+		Echvi_3024	0.58	-0.3
3,614,206	+		Echvi_3024	0.58	-0.9
3,614,206	+		Echvi_3024	0.58	-1.1
3,614,206	+		Echvi_3024	0.58	+1.7
3,614,207	-		Echvi_3024	0.58	+0.5
3,614,207	-		Echvi_3024	0.58	+0.0
3,614,207	-		Echvi_3024	0.58	+1.3
3,614,207	-		Echvi_3024	0.58	+1.7
3,614,207	-		Echvi_3024	0.58	+0.3
3,614,207	-		Echvi_3024	0.58	+0.6
3,614,207	-		Echvi_3024	0.58	+3.6
3,614,229	+		Echvi_3024	0.59	+1.0
3,614,229	+		Echvi_3024	0.59	-2.2
3,614,246	+		Echvi_3024	0.59	-2.7
3,614,292	+		Echvi_3024	0.61	+2.3
3,614,305	+		Echvi_3024	0.61	-1.9
3,614,306	-		Echvi_3024	0.61	+0.4
3,614,323	-		Echvi_3024	0.62	+0.3
3,614,345	-		Echvi_3024	0.63	+1.1
3,614,345	-		Echvi_3024	0.63	-0.9
3,614,373	+		Echvi_3024	0.64	+0.0
3,614,373	+		Echvi_3024	0.64	+2.6
3,614,395	+		Echvi_3024	0.65	+1.6
3,614,429	+		Echvi_3024	0.66	+0.7
3,614,429	+		Echvi_3024	0.66	+1.0
3,614,430	-		Echvi_3024	0.66	-0.2
3,614,430	-		Echvi_3024	0.66	-1.9
3,614,430	-		Echvi_3024	0.66	-1.5
3,614,470	+		Echvi_3024	0.67	+0.4
3,614,470	+		Echvi_3024	0.67	+2.3
3,614,470	+		Echvi_3024	0.67	+0.8
3,614,471	-		Echvi_3024	0.67	-1.1
3,614,471	-		Echvi_3024	0.67	-1.7
3,614,471	-		Echvi_3024	0.67	-1.1
3,614,563	+		Echvi_3024	0.71	-1.1
3,614,563	+		Echvi_3024	0.71	+0.3
3,614,567	-		Echvi_3024	0.71	+0.5
3,614,652	+		Echvi_3024	0.74	+2.3
3,614,704	+		Echvi_3024	0.76	+0.5
3,614,708	-		Echvi_3024	0.76	+0.9
3,614,708	-		Echvi_3024	0.76	+1.1
3,614,708	-		Echvi_3024	0.76	+0.6
3,614,807	+		Echvi_3024	0.80	+1.1
3,614,968	+		Echvi_3024	0.85	+1.5
3,614,970	+		Echvi_3024	0.85	+0.3
3,614,970	+		Echvi_3024	0.85	+1.5
3,614,971	-		Echvi_3024	0.85	-0.2
3,614,971	-		Echvi_3024	0.85	-0.4
3,615,100	+				-0.3
3,615,100	+				-1.3
3,615,100	+				+0.3
3,615,136	+				+1.7
3,615,137	-				-0.4
3,615,205	+				+0.7
3,615,206	-				-1.5
3,615,208	-				+0.1
3,615,223	+				+1.0
3,615,224	-				+1.1
3,615,224	-				-0.7
3,615,229	+				+3.1
3,615,230	-				-1.7
3,615,382	-				+1.0
3,615,420	+				+1.1
3,615,423	+				+0.2
3,615,424	-				-0.9
3,615,424	-				-2.4
3,615,425	+				-0.3
3,615,428	+				-0.2
3,615,436	+				-0.5
3,615,577	+				+0.8
3,615,578	-				-0.0
3,615,591	-				-2.1
3,615,619	+				+0.5
3,615,670	+				-0.3
3,615,670	+				+0.5
3,615,671	-				+0.7
3,615,679	-				-0.5
3,615,679	-				+1.3
3,615,697	+				+0.0
3,615,721	+				-1.0
3,615,722	-				-0.2
3,615,740	+				-0.3
3,615,850	-		Echvi_3025	0.22	+1.4
3,615,872	+		Echvi_3025	0.34	-0.2
3,615,877	-		Echvi_3025	0.37	+0.2
3,615,931	+		Echvi_3025	0.68	-0.3
3,615,953	+		Echvi_3025	0.80	-0.3
3,615,957	+		Echvi_3025	0.82	+1.4
3,615,957	+		Echvi_3025	0.82	+0.2
3,615,960	+		Echvi_3025	0.84	-1.1
3,615,960	+		Echvi_3025	0.84	-0.7
3,615,960	+		Echvi_3025	0.84	+0.0
3,615,981	+				+0.3
3,615,982	-				-1.8
3,616,095	+		Echvi_3026	0.10	+0.5
3,616,117	+		Echvi_3026	0.12	-0.4
3,616,173	+		Echvi_3026	0.17	-1.2
3,616,201	+		Echvi_3026	0.19	-0.8
3,616,233	+		Echvi_3026	0.21	-1.2
3,616,234	-		Echvi_3026	0.22	+2.6
3,616,234	-		Echvi_3026	0.22	-0.1
3,616,234	-		Echvi_3026	0.22	+1.9
3,616,346	-		Echvi_3026	0.31	-0.1