Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2576

Experiment: D-Trehalose 20mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose 20mM (C)
3,055,023	+				+0.9
3,055,024	-				+2.2
3,055,034	-				+1.3
3,055,049	+				+0.4
3,055,054	+				-0.7
3,055,118	-				-1.9
3,055,126	+				+0.8
3,055,134	+				+1.7
3,055,134	+				+1.7
3,055,134	+				+0.5
3,055,135	-				-0.1
3,055,135	-				+0.3
3,055,177	+		Echvi_2574	0.43	+1.7
3,055,178	-		Echvi_2574	0.44	-0.8
3,055,178	-		Echvi_2574	0.44	-1.5
3,055,180	+		Echvi_2574	0.46	-0.2
3,055,181	-		Echvi_2574	0.47	+0.1
3,055,182	+		Echvi_2574	0.48	-2.4
3,055,182	+		Echvi_2574	0.48	-0.7
3,055,183	-		Echvi_2574	0.49	-0.6
3,055,201	+		Echvi_2574	0.67	+0.3
3,055,204	-		Echvi_2574	0.70	+1.6
3,055,204	-		Echvi_2574	0.70	+1.8
3,055,218	-		Echvi_2574	0.83	-1.4
3,055,236	+				+0.3
3,055,236	+				-0.1
3,055,267	-				+0.0
3,055,267	-				-0.1
3,055,293	+				+2.0
3,055,293	+				+1.0
3,055,294	-				+0.8
3,055,297	-				-0.8
3,055,303	-				+1.1
3,055,367	+		Echvi_2575	0.20	-0.2
3,055,368	-		Echvi_2575	0.21	-1.2
3,055,376	+		Echvi_2575	0.22	+1.3
3,055,453	+		Echvi_2575	0.35	-2.1
3,055,453	+		Echvi_2575	0.35	-0.3
3,055,453	+		Echvi_2575	0.35	+1.1
3,055,454	-		Echvi_2575	0.36	-0.4
3,055,454	-		Echvi_2575	0.36	-0.5
3,055,454	-		Echvi_2575	0.36	+0.8
3,055,454	-		Echvi_2575	0.36	+2.9
3,055,454	-		Echvi_2575	0.36	-2.5
3,055,495	+		Echvi_2575	0.43	+1.0
3,055,520	+		Echvi_2575	0.47	-0.0
3,055,521	-		Echvi_2575	0.47	+0.5
3,055,527	+		Echvi_2575	0.48	-1.4
3,055,528	-		Echvi_2575	0.49	-0.0
3,055,549	+		Echvi_2575	0.52	+0.3
3,055,550	-		Echvi_2575	0.52	+1.7
3,055,557	-		Echvi_2575	0.54	+1.3
3,055,618	+		Echvi_2575	0.64	+0.7
3,055,623	+		Echvi_2575	0.65	+0.6
3,055,624	-		Echvi_2575	0.65	-0.3
3,055,640	+		Echvi_2575	0.68	+0.8
3,055,641	-		Echvi_2575	0.68	+0.3
3,055,641	-		Echvi_2575	0.68	+1.1
3,055,657	+		Echvi_2575	0.71	-0.1
3,055,685	+		Echvi_2575	0.76	-0.3
3,055,685	+		Echvi_2575	0.76	-1.6
3,055,686	-		Echvi_2575	0.76	-1.2
3,055,793	-				+0.3
3,055,809	+				-0.2
3,055,820	+				-1.5
3,055,821	-				-0.0
3,055,821	-				-3.1
3,055,831	+				-0.3
3,055,834	+				-1.4
3,055,883	+				+1.1
3,055,888	-				-1.0
3,055,888	-				+0.3
3,055,888	-				+0.3
3,055,918	+				+4.3
3,055,918	+				-1.7
3,055,919	-				+0.6
3,055,919	-				-0.7
3,055,919	-				-0.3
3,055,919	-				-1.7
3,055,940	-				-0.8
3,055,940	-				+1.5
3,056,085	+				-0.2
3,056,099	+				+1.3
3,056,100	-				+1.4
3,056,161	-		Echvi_2576	0.14	+1.7
3,056,203	-		Echvi_2576	0.18	+0.2
3,056,263	+		Echvi_2576	0.23	-1.5
3,056,266	-		Echvi_2576	0.23	+0.7
3,056,294	+		Echvi_2576	0.25	-1.4
3,056,294	+		Echvi_2576	0.25	-0.3
3,056,295	-		Echvi_2576	0.26	+0.1
3,056,340	-		Echvi_2576	0.29	-2.0
3,056,376	-		Echvi_2576	0.33	-0.7
3,056,452	-		Echvi_2576	0.39	-1.0
3,056,512	+		Echvi_2576	0.44	+2.3
3,056,512	+		Echvi_2576	0.44	+0.5
3,056,512	+		Echvi_2576	0.44	-1.4
3,056,513	-		Echvi_2576	0.44	+0.9
3,056,514	+		Echvi_2576	0.44	-0.2
3,056,527	+		Echvi_2576	0.46	-1.3
3,056,610	+		Echvi_2576	0.53	-0.5
3,056,620	-		Echvi_2576	0.54	+1.1
3,056,647	-		Echvi_2576	0.56	-2.2
3,056,656	-		Echvi_2576	0.57	-0.7
3,056,665	-		Echvi_2576	0.58	-0.6
3,056,670	+		Echvi_2576	0.58	-0.2
3,056,674	-		Echvi_2576	0.58	+1.3
3,056,674	-		Echvi_2576	0.58	-0.3
3,056,674	-		Echvi_2576	0.58	+0.5
3,056,683	+		Echvi_2576	0.59	-1.3
3,056,687	+		Echvi_2576	0.59	-0.9
3,056,688	-		Echvi_2576	0.59	-0.5
3,056,688	-		Echvi_2576	0.59	+0.1
3,056,731	+		Echvi_2576	0.63	-2.6
3,056,731	+		Echvi_2576	0.63	+1.3
3,056,856	+		Echvi_2576	0.74	-1.2
3,056,857	-		Echvi_2576	0.74	+0.4
3,056,857	-		Echvi_2576	0.74	+0.8
3,056,906	-		Echvi_2576	0.78	+0.3
3,056,906	-		Echvi_2576	0.78	+0.5
3,057,051	+				+0.4
3,057,083	+				-0.5
3,057,083	+				+0.8
3,057,083	+				-1.5
3,057,083	+				+0.1
3,057,083	+				-0.5
3,057,083	+				-0.1
3,057,084	-				-0.6
3,057,084	-				+0.3
3,057,084	-				-0.8
3,057,084	-				+2.9
3,057,084	-				+0.8
3,057,119	-				+0.5
3,057,237	-				+0.4
3,057,315	+				-2.4
3,057,315	+				-1.2
3,057,315	+				+0.3
3,057,315	+				+0.4
3,057,316	-				-0.1
3,057,316	-				+0.2
3,057,322	-				+0.4
3,057,322	-				+0.2
3,057,325	-				+1.3
3,057,505	+		Echvi_2577	0.27	+1.1
3,057,528	-		Echvi_2577	0.29	-0.6
3,057,583	+		Echvi_2577	0.34	-2.0
3,057,583	+		Echvi_2577	0.34	-0.0
3,057,583	+		Echvi_2577	0.34	+0.3
3,057,606	+		Echvi_2577	0.36	-2.0
3,057,607	-		Echvi_2577	0.37	+0.4
3,057,607	-		Echvi_2577	0.37	+1.1
3,057,699	-		Echvi_2577	0.45	+0.6
3,057,732	+		Echvi_2577	0.48	-1.5
3,057,735	+		Echvi_2577	0.49	-1.3
3,057,736	-		Echvi_2577	0.49	-0.7
3,057,791	-		Echvi_2577	0.54	-1.2
3,057,791	-		Echvi_2577	0.54	-2.3
3,057,810	+		Echvi_2577	0.56	+1.0
3,057,810	+		Echvi_2577	0.56	+0.7
3,057,897	-		Echvi_2577	0.64	+1.2
3,057,904	-		Echvi_2577	0.65	+0.0
3,057,919	+		Echvi_2577	0.66	-0.4
3,057,925	+		Echvi_2577	0.67	+0.6
3,057,925	+		Echvi_2577	0.67	+3.3
3,057,925	+		Echvi_2577	0.67	-0.8
3,057,972	+		Echvi_2577	0.71	-0.9
3,057,973	-		Echvi_2577	0.71	+0.7
3,058,009	-		Echvi_2577	0.75	-1.5
3,058,009	-		Echvi_2577	0.75	-2.3
3,058,012	+		Echvi_2577	0.75	+1.5
3,058,013	-		Echvi_2577	0.75	-1.9
3,058,013	-		Echvi_2577	0.75	-0.8
3,058,013	-		Echvi_2577	0.75	-0.4
3,058,013	-		Echvi_2577	0.75	-0.5
3,058,013	-		Echvi_2577	0.75	+1.6
3,058,086	+		Echvi_2577	0.82	-0.7
3,058,086	+		Echvi_2577	0.82	-3.1
3,058,086	+		Echvi_2577	0.82	-1.0
3,058,087	-		Echvi_2577	0.82	-0.6
3,058,087	-		Echvi_2577	0.82	+0.6
3,058,089	+		Echvi_2577	0.82	-0.9
3,058,147	+		Echvi_2577	0.88	-1.0
3,058,147	+		Echvi_2577	0.88	-1.0
3,058,148	-		Echvi_2577	0.88	-0.2
3,058,148	-		Echvi_2577	0.88	+0.6
3,058,148	-		Echvi_2577	0.88	+1.3