Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2173

Experiment: D-Trehalose 20mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose 20mM (C)
2,594,962	+		Echvi_2172	0.44	+2.2
2,594,962	+		Echvi_2172	0.44	+0.9
2,594,963	-		Echvi_2172	0.44	-2.8
2,594,984	-		Echvi_2172	0.45	-0.3
2,594,988	+		Echvi_2172	0.46	+0.9
2,594,988	+		Echvi_2172	0.46	-3.1
2,594,988	+		Echvi_2172	0.46	-0.9
2,594,988	+		Echvi_2172	0.46	-0.5
2,594,989	-		Echvi_2172	0.46	-0.3
2,594,989	-		Echvi_2172	0.46	-2.1
2,594,989	-		Echvi_2172	0.46	-0.0
2,594,989	-		Echvi_2172	0.46	-0.2
2,594,989	-		Echvi_2172	0.46	-0.1
2,594,990	+		Echvi_2172	0.46	+0.3
2,594,990	+		Echvi_2172	0.46	-0.3
2,594,990	+		Echvi_2172	0.46	+1.1
2,594,990	+		Echvi_2172	0.46	+2.0
2,594,991	-		Echvi_2172	0.46	-0.4
2,594,991	-		Echvi_2172	0.46	-2.1
2,595,013	+		Echvi_2172	0.47	+0.5
2,595,066	-		Echvi_2172	0.51	-4.8
2,595,155	+		Echvi_2172	0.56	-1.0
2,595,156	-		Echvi_2172	0.56	-0.5
2,595,263	+		Echvi_2172	0.63	+0.8
2,595,338	+		Echvi_2172	0.68	-0.2
2,595,356	+		Echvi_2172	0.69	-0.7
2,595,369	+		Echvi_2172	0.70	+0.6
2,595,370	-		Echvi_2172	0.70	+2.3
2,595,370	-		Echvi_2172	0.70	+0.4
2,595,427	+		Echvi_2172	0.74	+0.1
2,595,427	+		Echvi_2172	0.74	+0.4
2,595,427	+		Echvi_2172	0.74	-0.8
2,595,427	+		Echvi_2172	0.74	-0.7
2,595,427	+		Echvi_2172	0.74	+1.4
2,595,428	-		Echvi_2172	0.74	-0.1
2,595,475	+		Echvi_2172	0.77	-1.4
2,595,507	+		Echvi_2172	0.79	+0.4
2,595,526	+		Echvi_2172	0.80	+1.0
2,595,639	-		Echvi_2172	0.88	-0.6
2,595,645	-		Echvi_2172	0.88	-0.6
2,595,645	-		Echvi_2172	0.88	-0.1
2,595,713	-				-0.8
2,595,805	+				+0.2
2,595,887	-				-0.5
2,595,910	+				-0.5
2,595,910	+				+0.3
2,595,910	+				-0.2
2,595,910	+				+0.8
2,595,911	-				-0.6
2,595,911	-				+0.9
2,595,914	-				+1.2
2,595,917	+				-0.1
2,595,917	+				-0.9
2,595,917	+				-1.5
2,595,917	+				-0.4
2,595,917	+				-0.1
2,595,917	+				-0.3
2,595,918	-				-0.5
2,595,918	-				+0.2
2,595,918	-				-0.7
2,595,918	-				-1.2
2,595,918	-				+0.3
2,595,964	-				+1.7
2,596,047	+				-0.5
2,596,048	-				-0.3
2,596,051	-				-0.0
2,596,056	-				-1.7
2,596,059	+				-1.7
2,596,059	+				-1.9
2,596,060	-				-0.3
2,596,060	-				-0.8
2,596,060	-				-0.8
2,596,176	+		Echvi_2173	0.15	-0.6
2,596,176	+		Echvi_2173	0.15	-0.1
2,596,176	+		Echvi_2173	0.15	-0.4
2,596,177	-		Echvi_2173	0.15	-0.7
2,596,177	-		Echvi_2173	0.15	-2.5
2,596,213	-		Echvi_2173	0.17	+0.3
2,596,302	+		Echvi_2173	0.23	+0.1
2,596,303	-		Echvi_2173	0.23	-0.1
2,596,320	-		Echvi_2173	0.24	+0.5
2,596,333	+		Echvi_2173	0.25	+0.7
2,596,490	-		Echvi_2173	0.35	-0.6
2,596,490	-		Echvi_2173	0.35	+1.1
2,596,495	+		Echvi_2173	0.35	+1.4
2,596,545	+		Echvi_2173	0.39	-0.9
2,596,551	+		Echvi_2173	0.39	+1.4
2,596,555	+		Echvi_2173	0.39	+0.0
2,596,556	-		Echvi_2173	0.39	+1.0
2,596,556	-		Echvi_2173	0.39	+2.4
2,596,632	+		Echvi_2173	0.44	+0.2
2,596,632	+		Echvi_2173	0.44	+1.1
2,596,632	+		Echvi_2173	0.44	+1.4
2,596,640	-		Echvi_2173	0.45	-0.0
2,596,786	+		Echvi_2173	0.54	-0.8
2,596,787	-		Echvi_2173	0.54	+0.0
2,596,787	-		Echvi_2173	0.54	+0.2
2,596,836	+		Echvi_2173	0.58	+1.6
2,596,836	+		Echvi_2173	0.58	+0.7
2,596,837	-		Echvi_2173	0.58	+0.3
2,596,837	-		Echvi_2173	0.58	+0.4
2,596,837	-		Echvi_2173	0.58	+1.2
2,596,837	-		Echvi_2173	0.58	+0.0
2,596,855	-		Echvi_2173	0.59	+0.7
2,596,887	-		Echvi_2173	0.61	-0.1
2,596,948	-		Echvi_2173	0.65	+1.8
2,596,948	-		Echvi_2173	0.65	-0.3
2,596,978	-		Echvi_2173	0.67	-0.0
2,597,016	-		Echvi_2173	0.69	-0.6
2,597,070	-		Echvi_2173	0.73	-0.2
2,597,104	-		Echvi_2173	0.75	+1.2
2,597,104	-		Echvi_2173	0.75	-0.4
2,597,104	-		Echvi_2173	0.75	-2.9
2,597,107	+		Echvi_2173	0.75	-0.8
2,597,107	+		Echvi_2173	0.75	-0.9
2,597,107	+		Echvi_2173	0.75	+1.4
2,597,107	+		Echvi_2173	0.75	+1.0
2,597,107	+		Echvi_2173	0.75	+2.0
2,597,108	-		Echvi_2173	0.75	+0.5
2,597,108	-		Echvi_2173	0.75	+0.0
2,597,115	+		Echvi_2173	0.76	+0.6
2,597,115	+		Echvi_2173	0.76	+0.4
2,597,208	+		Echvi_2173	0.82	-1.1
2,597,208	+		Echvi_2173	0.82	-0.7
2,597,252	-		Echvi_2173	0.85	+0.7
2,597,280	-		Echvi_2173	0.87	+1.1
2,597,297	+		Echvi_2173	0.88	-0.4
2,597,353	+				-0.0
2,597,353	+				-0.4
2,597,362	-				+1.6
2,597,395	+				-0.9
2,597,465	+				-0.5
2,597,466	-				-2.4
2,597,466	-				-1.8
2,597,522	-				-0.6
2,597,600	-				+0.6
2,597,643	+				+0.2
2,597,643	+				+1.1
2,597,643	+				+1.4
2,597,643	+				-0.7
2,597,643	+				+0.2
2,597,643	+				-2.1
2,597,643	+				-3.2
2,597,643	+				-0.2
2,597,643	+				-0.6
2,597,643	+				+0.7
2,597,643	+				-0.0
2,597,643	+				+1.4
2,597,643	+				-0.6
2,597,644	-				-1.7
2,597,644	-				+0.8
2,597,644	-				-0.0
2,597,644	-				+0.7
2,597,644	-				-0.3
2,597,644	-				+1.0
2,597,644	-				-1.0
2,597,644	-				+0.5
2,597,644	-				-0.4
2,597,644	-				-0.8
2,597,644	-				+1.9
2,597,644	-				+0.7
2,597,644	-				-0.5
2,597,644	-				+3.8
2,597,724	-				+0.6
2,597,739	+				-0.4
2,597,785	-				-0.1
2,597,786	+		Echvi_2174	0.13	+1.2
2,597,786	+		Echvi_2174	0.13	-1.3
2,597,787	-		Echvi_2174	0.14	+2.0
2,597,787	-		Echvi_2174	0.14	+0.6
2,597,879	-		Echvi_2174	0.33	+0.4
2,597,940	-		Echvi_2174	0.46	+3.0
2,597,940	-		Echvi_2174	0.46	-0.1
2,597,940	-		Echvi_2174	0.46	+0.9
2,597,951	+		Echvi_2174	0.48	-0.9
2,597,980	-		Echvi_2174	0.54	-1.0
2,598,160	+				+1.0
2,598,163	+				-0.7
2,598,164	-				-0.2
2,598,164	-				-0.4
2,598,225	-				+0.6
2,598,245	+				+0.5
2,598,260	+				+1.8
2,598,306	+				+1.6
2,598,309	-				-0.0
2,598,309	-				+0.3
2,598,349	-				-0.2
2,598,374	+				-1.4