Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1966

Experiment: D-Trehalose 20mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose 20mM (C)
2,313,834	-				+2.0
2,313,942	-				-1.7
2,314,021	-				-0.6
2,314,080	+				+1.2
2,314,081	-				+1.3
2,314,083	-				-2.0
2,314,083	-				+1.7
2,314,150	-				+1.4
2,314,196	+				-0.7
2,314,197	-				+0.3
2,314,197	-				+1.1
2,314,197	-				+2.5
2,314,197	-				+0.2
2,314,263	-				-0.3
2,314,307	+				-0.4
2,314,337	+				+1.4
2,314,337	+				-1.3
2,314,378	+				+1.0
2,314,379	-				+0.6
2,314,409	+				-1.3
2,314,410	-				-0.7
2,314,451	-				-0.1
2,314,457	-				-0.4
2,314,457	-				+0.6
2,314,471	-				-1.1
2,314,472	+				+0.2
2,314,472	+				+0.1
2,314,473	-				+1.0
2,314,568	+				+0.1
2,314,622	-				-0.2
2,314,686	+				-0.6
2,314,719	+				+0.1
2,314,719	+				-0.1
2,314,719	+				+0.2
2,314,794	-				+1.4
2,314,796	+				+0.4
2,314,914	+				+2.4
2,314,915	-				+1.1
2,314,915	-				+5.0
2,314,915	-				-0.3
2,314,939	-				+1.1
2,314,939	-				+0.6
2,314,948	-				+1.4
2,314,948	-				+2.4
2,314,948	-				+3.0
2,315,152	-		Echvi_1966	0.18	+0.2
2,315,214	+		Echvi_1966	0.22	-0.7
2,315,214	+		Echvi_1966	0.22	+0.8
2,315,214	+		Echvi_1966	0.22	+0.0
2,315,224	+		Echvi_1966	0.22	-1.9
2,315,254	+		Echvi_1966	0.24	-0.1
2,315,254	+		Echvi_1966	0.24	+0.2
2,315,255	-		Echvi_1966	0.24	+1.3
2,315,310	+		Echvi_1966	0.27	-0.2
2,315,311	-		Echvi_1966	0.27	+0.9
2,315,311	-		Echvi_1966	0.27	-2.1
2,315,311	-		Echvi_1966	0.27	+0.7
2,315,311	-		Echvi_1966	0.27	-0.0
2,315,335	+		Echvi_1966	0.28	+1.4
2,315,391	+		Echvi_1966	0.31	+0.2
2,315,391	+		Echvi_1966	0.31	+1.0
2,315,490	+		Echvi_1966	0.37	+3.0
2,315,506	+		Echvi_1966	0.38	-0.7
2,315,609	+		Echvi_1966	0.43	+2.0
2,315,610	-		Echvi_1966	0.43	+0.4
2,315,614	-		Echvi_1966	0.44	-0.4
2,315,614	-		Echvi_1966	0.44	+0.9
2,315,614	-		Echvi_1966	0.44	+0.2
2,315,614	-		Echvi_1966	0.44	+0.5
2,315,627	-		Echvi_1966	0.44	+0.2
2,315,627	-		Echvi_1966	0.44	+0.7
2,315,701	+		Echvi_1966	0.49	+0.3
2,315,778	+		Echvi_1966	0.53	-0.6
2,315,868	+		Echvi_1966	0.58	-0.5
2,315,925	+		Echvi_1966	0.61	+0.2
2,315,978	-		Echvi_1966	0.64	+2.4
2,315,991	-		Echvi_1966	0.65	-0.8
2,315,991	-		Echvi_1966	0.65	-0.6
2,316,016	+		Echvi_1966	0.66	-0.2
2,316,041	+		Echvi_1966	0.67	+0.1
2,316,045	-		Echvi_1966	0.68	-0.6
2,316,075	+		Echvi_1966	0.69	+2.4
2,316,079	-		Echvi_1966	0.69	+0.6
2,316,086	+		Echvi_1966	0.70	-0.5
2,316,086	+		Echvi_1966	0.70	+1.2
2,316,110	-		Echvi_1966	0.71	+0.8
2,316,110	-		Echvi_1966	0.71	-2.0
2,316,137	-		Echvi_1966	0.73	+0.6
2,316,137	-		Echvi_1966	0.73	-0.9
2,316,138	+		Echvi_1966	0.73	+1.0
2,316,144	+		Echvi_1966	0.73	-0.8
2,316,144	+		Echvi_1966	0.73	-0.5
2,316,144	+		Echvi_1966	0.73	+2.3
2,316,144	+		Echvi_1966	0.73	-0.6
2,316,144	+		Echvi_1966	0.73	+1.0
2,316,144	+		Echvi_1966	0.73	-1.2
2,316,145	-		Echvi_1966	0.73	+0.2
2,316,145	-		Echvi_1966	0.73	-0.6
2,316,145	-		Echvi_1966	0.73	+1.6
2,316,145	-		Echvi_1966	0.73	+1.1
2,316,145	-		Echvi_1966	0.73	+0.4
2,316,146	+		Echvi_1966	0.73	+1.8
2,316,146	+		Echvi_1966	0.73	-0.1
2,316,150	-		Echvi_1966	0.73	-0.4
2,316,209	-		Echvi_1966	0.77	-0.3
2,316,274	+		Echvi_1966	0.80	+0.4
2,316,331	+		Echvi_1966	0.83	-0.9
2,316,332	-		Echvi_1966	0.83	+1.1
2,316,376	+		Echvi_1966	0.86	-1.1
2,316,442	-		Echvi_1966	0.90	+0.9
2,316,521	+				-0.6
2,316,521	+				-1.3
2,316,521	+				+0.1
2,316,522	-				-1.1
2,316,522	-				-1.6
2,316,522	-				+0.3
2,316,522	-				-0.8
2,316,541	+				-0.7
2,316,578	-				-0.5
2,316,587	-				-0.1
2,316,590	+				-1.0
2,316,591	-				-0.1
2,316,608	+				-1.6
2,316,609	-				-0.0
2,316,609	-				+0.8
2,316,618	-				-0.1
2,316,653	-				+0.0
2,316,653	-				+4.6
2,316,684	+				-3.4
2,316,725	+				-1.5
2,316,725	+				-1.9
2,316,726	-				-0.1
2,316,748	-				+1.4
2,316,749	+				+1.7
2,316,749	+				+2.4
2,316,749	+				-0.1
2,316,749	+				+0.3
2,316,749	+				-0.6
2,316,749	+				+0.0
2,316,749	+				-0.7
2,316,750	-				-1.9
2,316,750	-				-0.2
2,316,752	+				+0.2
2,316,752	+				-0.7
2,316,753	-				+2.6
2,316,753	-				-1.9
2,316,774	+				-0.7
2,316,775	-				-0.1
2,316,778	+				-3.1
2,316,782	+				+0.3
2,316,782	+				+0.1
2,316,783	-				-0.9
2,316,836	+				+0.6
2,316,848	-				-1.4
2,317,030	+				-0.4
2,317,032	+				+0.6
2,317,038	-				-1.0
2,317,085	+				-0.2
2,317,085	+				-2.6
2,317,085	+				+0.9
2,317,087	+				+0.8
2,317,087	+				-0.2
2,317,088	-				-0.5
2,317,140	-				+0.4
2,317,148	-				+2.1
2,317,148	-				+0.5
2,317,151	-				-2.3
2,317,151	-				+0.0
2,317,191	+				+1.0
2,317,192	-				-1.9
2,317,192	-				-2.3
2,317,194	+				-0.1
2,317,195	-				+0.9
2,317,195	-				-2.0
2,317,345	-		Echvi_1967	0.20	+0.1
2,317,347	-		Echvi_1967	0.20	-0.2
2,317,404	-		Echvi_1967	0.24	+0.1
2,317,420	+		Echvi_1967	0.26	-0.9
2,317,437	+		Echvi_1967	0.27	+1.2
2,317,438	-		Echvi_1967	0.27	-0.1
2,317,456	+		Echvi_1967	0.28	-0.6
2,317,458	+		Echvi_1967	0.28	-1.4
2,317,459	-		Echvi_1967	0.28	+1.3
2,317,480	+		Echvi_1967	0.30	-2.4
2,317,481	-		Echvi_1967	0.30	-1.1
2,317,481	-		Echvi_1967	0.30	+2.8
2,317,492	+		Echvi_1967	0.31	-0.3
2,317,493	-		Echvi_1967	0.31	+0.0
2,317,533	+		Echvi_1967	0.34	-1.1
2,317,533	+		Echvi_1967	0.34	-0.8
2,317,533	+		Echvi_1967	0.34	-1.6
2,317,533	+		Echvi_1967	0.34	-0.9
2,317,533	+		Echvi_1967	0.34	+0.1
2,317,533	+		Echvi_1967	0.34	-2.5
2,317,533	+		Echvi_1967	0.34	+0.5
2,317,533	+		Echvi_1967	0.34	-0.5
2,317,533	+		Echvi_1967	0.34	-1.4
2,317,533	+		Echvi_1967	0.34	+0.3
2,317,533	+		Echvi_1967	0.34	+0.1
2,317,533	+		Echvi_1967	0.34	-2.3
2,317,533	+		Echvi_1967	0.34	-0.1
2,317,534	-		Echvi_1967	0.34	+0.7
2,317,534	-		Echvi_1967	0.34	-1.6
2,317,534	-		Echvi_1967	0.34	-0.3
2,317,534	-		Echvi_1967	0.34	-0.4
2,317,534	-		Echvi_1967	0.34	+0.9
2,317,534	-		Echvi_1967	0.34	-0.9
2,317,535	+		Echvi_1967	0.34	-0.2
2,317,535	+		Echvi_1967	0.34	+0.5
2,317,536	-		Echvi_1967	0.34	+2.5
2,317,536	-		Echvi_1967	0.34	+0.3
2,317,536	-		Echvi_1967	0.34	+0.5
2,317,536	-		Echvi_1967	0.34	+1.0
2,317,537	+		Echvi_1967	0.34	+1.1
2,317,537	+		Echvi_1967	0.34	+1.4
2,317,538	-		Echvi_1967	0.34	-0.7
2,317,538	-		Echvi_1967	0.34	-0.7
2,317,538	-		Echvi_1967	0.34	+1.6
2,317,543	+		Echvi_1967	0.35	+0.9
2,317,544	-		Echvi_1967	0.35	+0.6
2,317,550	-		Echvi_1967	0.35	+1.4
2,317,589	-		Echvi_1967	0.38	-0.7
2,317,590	+		Echvi_1967	0.38	+2.0
2,317,590	+		Echvi_1967	0.38	+0.6
2,317,590	+		Echvi_1967	0.38	+0.4
2,317,590	+		Echvi_1967	0.38	-1.1
2,317,590	+		Echvi_1967	0.38	-2.6
2,317,591	-		Echvi_1967	0.38	+3.0
2,317,591	-		Echvi_1967	0.38	+0.3
2,317,592	+				-0.6
2,317,593	-		Echvi_1967	0.38	-0.7