Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1052

Experiment: D-Trehalose 20mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose 20mM (C)
1,212,995	+		Echvi_1051	0.52	+0.0
1,212,995	+		Echvi_1051	0.52	-2.1
1,212,996	-		Echvi_1051	0.52	-0.0
1,213,072	+		Echvi_1051	0.57	-0.9
1,213,073	-		Echvi_1051	0.57	-0.8
1,213,136	+		Echvi_1051	0.62	-0.8
1,213,136	+		Echvi_1051	0.62	-2.8
1,213,136	+		Echvi_1051	0.62	-1.3
1,213,137	-		Echvi_1051	0.62	+0.1
1,213,162	+		Echvi_1051	0.64	-0.8
1,213,162	+		Echvi_1051	0.64	-3.4
1,213,162	+		Echvi_1051	0.64	+1.1
1,213,162	+		Echvi_1051	0.64	-3.2
1,213,162	+		Echvi_1051	0.64	-1.5
1,213,163	-		Echvi_1051	0.64	-0.1
1,213,163	-		Echvi_1051	0.64	-0.0
1,213,163	-		Echvi_1051	0.64	+0.5
1,213,163	-		Echvi_1051	0.64	+0.0
1,213,163	-		Echvi_1051	0.64	+1.6
1,213,172	+		Echvi_1051	0.64	-0.6
1,213,172	+		Echvi_1051	0.64	+0.1
1,213,172	+		Echvi_1051	0.64	-0.3
1,213,172	+		Echvi_1051	0.64	-1.4
1,213,172	+		Echvi_1051	0.64	+1.0
1,213,172	+		Echvi_1051	0.64	+0.7
1,213,172	+		Echvi_1051	0.64	+0.7
1,213,172	+		Echvi_1051	0.64	+0.3
1,213,173	-		Echvi_1051	0.64	-0.4
1,213,173	-		Echvi_1051	0.64	+1.6
1,213,173	-		Echvi_1051	0.64	+0.5
1,213,173	-		Echvi_1051	0.64	-2.5
1,213,173	-		Echvi_1051	0.64	-1.2
1,213,173	-		Echvi_1051	0.64	+0.6
1,213,173	-		Echvi_1051	0.64	-2.6
1,213,175	-		Echvi_1051	0.65	-0.1
1,213,175	-		Echvi_1051	0.65	-0.6
1,213,215	+		Echvi_1051	0.68	-0.0
1,213,215	+		Echvi_1051	0.68	+0.7
1,213,235	+		Echvi_1051	0.69	+2.0
1,213,235	+		Echvi_1051	0.69	+0.5
1,213,236	-		Echvi_1051	0.69	-1.3
1,213,387	+		Echvi_1051	0.80	-1.7
1,213,388	-		Echvi_1051	0.80	-0.5
1,213,388	-		Echvi_1051	0.80	-0.0
1,213,444	+		Echvi_1051	0.84	-0.6
1,213,474	-		Echvi_1051	0.86	+0.8
1,213,549	+				+2.1
1,213,549	+				-1.3
1,213,563	-				-0.0
1,213,623	+				+2.3
1,213,624	-				+1.5
1,213,645	-				-0.9
1,213,655	-				-3.3
1,213,655	-				+1.0
1,213,713	+				+0.3
1,213,713	+				-0.0
1,213,713	+				-0.6
1,213,713	+				-0.7
1,213,713	+				+0.4
1,213,713	+				-2.2
1,213,714	-				+1.0
1,213,714	-				-0.8
1,213,714	-				-0.5
1,213,715	+				-0.8
1,213,715	+				-0.1
1,213,715	+				-1.9
1,213,715	+				-1.8
1,213,715	+				-1.3
1,213,715	+				+4.1
1,213,716	-				-1.8
1,213,743	+				+0.2
1,213,744	-				-0.3
1,213,760	-				+0.7
1,213,762	-				+1.0
1,213,819	-				-1.9
1,213,821	-				+0.3
1,213,841	-				+0.3
1,213,843	+				-0.1
1,213,844	-				+0.4
1,213,844	-				+1.6
1,213,851	+				+0.0
1,213,851	+				+0.8
1,213,852	-				+0.8
1,213,855	+				+0.6
1,213,946	+				+0.1
1,213,971	+				+1.0
1,213,999	+				-0.2
1,213,999	+				-0.7
1,213,999	+				-0.5
1,214,029	+				-0.7
1,214,029	+				+1.2
1,214,046	+		Echvi_1052	0.12	-2.2
1,214,071	-		Echvi_1052	0.16	-2.5
1,214,073	+		Echvi_1052	0.17	-0.4
1,214,074	-		Echvi_1052	0.17	+0.2
1,214,074	-		Echvi_1052	0.17	-0.6
1,214,077	+		Echvi_1052	0.17	-0.8
1,214,077	+		Echvi_1052	0.17	-2.0
1,214,077	+		Echvi_1052	0.17	-0.3
1,214,078	-		Echvi_1052	0.18	+0.0
1,214,078	-		Echvi_1052	0.18	-0.4
1,214,078	-		Echvi_1052	0.18	-1.0
1,214,171	-		Echvi_1052	0.34	-0.4
1,214,172	+		Echvi_1052	0.34	-0.5
1,214,172	+		Echvi_1052	0.34	+0.0
1,214,282	+		Echvi_1052	0.53	-1.4
1,214,305	-		Echvi_1052	0.57	+1.9
1,214,308	-		Echvi_1052	0.57	+1.8
1,214,368	+		Echvi_1052	0.67	+0.2
1,214,368	+		Echvi_1052	0.67	-0.9
1,214,369	-		Echvi_1052	0.68	-0.1
1,214,406	-		Echvi_1052	0.74	-0.1
1,214,426	-		Echvi_1052	0.77	-1.6
1,214,432	-		Echvi_1052	0.78	-1.3
1,214,450	+		Echvi_1052	0.81	-2.4
1,214,451	-		Echvi_1052	0.82	-0.7
1,214,451	-		Echvi_1052	0.82	-1.1
1,214,458	+		Echvi_1052	0.83	+0.0
1,214,515	+				-0.4
1,214,515	+				-0.5
1,214,516	-				-0.4
1,214,528	+				-0.4
1,214,528	+				-0.2
1,214,528	+				-0.2
1,214,528	+				-0.9
1,214,528	+				-0.6
1,214,529	-				+0.4
1,214,529	-				+5.0
1,214,529	-				+0.0
1,214,532	+				-0.1
1,214,533	-				+0.5
1,214,552	+				+0.8
1,214,557	+				-0.5
1,214,558	-				+1.6
1,214,558	-				+0.7
1,214,558	-				+1.6
1,214,558	-				-1.9
1,214,558	-				-0.9
1,214,564	-				-0.6
1,214,564	-				-0.4
1,214,570	+				+1.6
1,214,571	-				+1.0
1,214,583	-				-1.5
1,214,583	-				+0.2
1,214,583	-				-0.8
1,214,620	+				+0.5
1,214,621	-				+0.8
1,214,635	+				+2.2
1,214,635	+				+0.9
1,214,636	-				+0.9
1,214,662	+				+1.3
1,214,662	+				+0.6
1,214,663	-				+0.8
1,214,663	-				-0.6
1,214,663	-				-0.8
1,214,663	-				+2.4
1,214,680	+		Echvi_1053	0.11	-1.3
1,214,794	-		Echvi_1053	0.27	-1.4
1,214,799	+		Echvi_1053	0.28	-0.0
1,214,799	+		Echvi_1053	0.28	+0.8
1,214,799	+		Echvi_1053	0.28	-3.0
1,214,799	+		Echvi_1053	0.28	-0.8
1,214,817	+		Echvi_1053	0.31	-1.1
1,214,818	-		Echvi_1053	0.31	-2.5
1,214,898	+		Echvi_1053	0.42	+4.2
1,214,900	+		Echvi_1053	0.43	-3.0
1,214,900	+		Echvi_1053	0.43	+0.0
1,214,901	-		Echvi_1053	0.43	-0.4
1,214,980	-		Echvi_1053	0.54	+0.1
1,214,996	-		Echvi_1053	0.56	-0.9
1,215,041	-		Echvi_1053	0.63	-0.1
1,215,107	-		Echvi_1053	0.72	-1.4
1,215,239	-				-0.2
1,215,239	-				-1.4
1,215,239	-				-0.2
1,215,260	-				-0.1
1,215,268	+				+1.0
1,215,314	+				-0.8
1,215,314	+				-0.3
1,215,315	-				-1.9
1,215,315	-				-0.3
1,215,321	-				-0.5
1,215,335	+				+0.3
1,215,342	+				-1.9
1,215,345	-				-0.9
1,215,352	-				+1.6
1,215,355	+				-0.0
1,215,371	+				+1.0
1,215,372	-				+0.6
1,215,373	+				-1.4
1,215,373	+				+2.2
1,215,373	+				+0.6
1,215,408	-				-2.1
1,215,427	+		Echvi_1054	0.13	-2.1
1,215,552	+		Echvi_1054	0.48	-0.0
1,215,552	+		Echvi_1054	0.48	-0.1