Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_1827

Experiment: KB with Nitrofurantoin 0.0625 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPsyr_1825 and Psyr_1826 are separated by 61 nucleotidesPsyr_1826 and Psyr_1827 are separated by 137 nucleotidesPsyr_1827 and Psyr_1828 are separated by 89 nucleotides Psyr_1825: Psyr_1825 - DNA polymerase III, tau subunit, at 2,105,845 to 2,108,055 _1825 Psyr_1826: Psyr_1826 - Conserved hypothetical protein 103, at 2,108,117 to 2,108,443 _1826 Psyr_1827: Psyr_1827 - SirA-like protein, at 2,108,581 to 2,108,835 _1827 Psyr_1828: Psyr_1828 - 4-phosphoerythronate dehydrogenase, at 2,108,925 to 2,110,067 _1828 Position (kb) 2108 2109Strain fitness (log2 ratio) -1 0 1at 2108.111 kb on + strandat 2108.112 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction KB with Nitrofurantoin 0.0625 mg/ml
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2,108,111 + -1.6
2,108,112 - +1.0

Or see this region's nucleotide sequence