Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_1410

Experiment: KB with Nitrofurantoin 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Nitrofurantoin 0.0625 mg/ml
1,595,254	-		Psyr_1408	0.58	-2.5
1,595,405	+		Psyr_1408	0.87	-0.3
1,595,481	+				-0.9
1,595,481	+				+1.1
1,595,481	+				+0.1
1,595,481	+				+0.2
1,595,481	+				-0.1
1,595,481	+				+0.9
1,595,481	+				+1.3
1,595,482	-				-0.9
1,595,482	-				-3.8
1,595,482	-				-2.9
1,595,482	-				+0.7
1,595,482	-				-1.9
1,595,482	-				-1.9
1,595,482	-				-1.3
1,595,483	+				-0.1
1,595,483	+				-0.4
1,595,483	+				+0.3
1,595,483	+				-1.1
1,595,483	+				-1.3
1,595,483	+				+0.9
1,595,483	+				-0.4
1,595,483	+				+0.3
1,595,483	+				-0.1
1,595,483	+				-0.8
1,595,483	+				+1.0
1,595,483	+				+0.2
1,595,483	+				+0.4
1,595,483	+				+1.9
1,595,483	+				+0.5
1,595,484	-				-1.7
1,595,484	-				-0.2
1,595,484	-				-1.3
1,595,484	-				-3.7
1,595,484	-				-1.7
1,595,484	-				-0.3
1,595,484	-				-1.5
1,595,484	-				-0.6
1,595,494	-				-1.2
1,595,500	+				-0.4
1,595,500	+				-1.7
1,595,501	-				-0.0
1,595,573	+				-2.9
1,595,855	+		Psyr_1409	0.48	-1.3
1,595,855	+		Psyr_1409	0.48	-1.7
1,595,864	+		Psyr_1409	0.50	-0.3
1,595,865	-		Psyr_1409	0.50	-0.9
1,596,167	-				-1.5
1,596,192	-				-1.9
1,596,426	+		Psyr_1410	0.24	+0.7
1,596,427	-		Psyr_1410	0.24	-2.1
1,596,427	-		Psyr_1410	0.24	-3.0
1,596,427	-		Psyr_1410	0.24	-1.6
1,596,427	-		Psyr_1410	0.24	+0.1
1,596,427	-		Psyr_1410	0.24	-3.0
1,596,551	-		Psyr_1410	0.36	-1.6
1,596,721	+		Psyr_1410	0.52	-1.9
1,597,082	-		Psyr_1410	0.86	-1.3
1,597,082	-		Psyr_1410	0.86	+0.7
1,597,099	+		Psyr_1410	0.88	-0.6
1,597,099	+		Psyr_1410	0.88	+0.4
1,597,100	-		Psyr_1410	0.88	-0.3
1,597,100	-		Psyr_1410	0.88	-0.5
1,597,101	+		Psyr_1410	0.88	-2.9
1,597,102	-		Psyr_1410	0.88	-2.6
1,597,165	-				+0.8
1,597,226	+				-0.4
1,597,226	+				+2.3
1,597,226	+				-0.2
1,597,226	+				-0.9
1,597,228	+				+0.3
1,597,228	+				-0.9
1,597,298	+				-0.6
1,597,298	+				-0.0
1,597,298	+				+0.7
1,597,298	+				-0.7
1,597,298	+				-1.3
1,597,298	+				+0.9
1,597,298	+				-0.5
1,597,298	+				-1.3
1,597,298	+				+0.2
1,597,298	+				-1.3
1,597,352	+				+0.2
1,597,352	+				+0.0
1,597,359	+				-0.1
1,597,364	+				+0.0
1,597,364	+				+0.4
1,597,446	+		Psyr_1411	0.17	-0.4
1,597,449	+		Psyr_1411	0.18	+0.1
1,597,449	+		Psyr_1411	0.18	+0.4
1,597,449	+		Psyr_1411	0.18	+1.9
1,597,449	+		Psyr_1411	0.18	+0.3
1,597,449	+		Psyr_1411	0.18	-0.5
1,597,458	+		Psyr_1411	0.20	+1.4
1,597,543	+		Psyr_1411	0.38	+0.2
1,597,652	+		Psyr_1411	0.61	+1.0
1,597,730	+		Psyr_1411	0.78	-0.2
1,597,736	+		Psyr_1411	0.79	-0.7
1,597,798	+				-0.4
1,597,798	+				-0.3
1,597,798	+				+0.1
1,597,798	+				-0.3
1,597,798	+				+1.1