Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_0305

Experiment: KB with Nitrofurantoin 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Nitrofurantoin 0.0625 mg/ml
324,055	+				-0.4
324,055	+				+1.4
324,116	+				+0.1
324,116	+				-2.1
324,117	-				-1.8
324,172	+				-0.6
324,172	+				-3.1
324,172	+				-0.3
324,173	-				+1.8
324,173	-				-0.7
324,173	-				-0.7
324,173	-				+0.7
324,183	-				+0.4
324,183	-				-0.7
324,183	-				-0.5
324,191	-				+0.3
324,231	-				-1.4
324,233	+				-0.9
324,234	-				+0.1
324,515	+		Psyr_0304	0.25	-1.7
324,597	-		Psyr_0304	0.37	-0.3
324,597	-		Psyr_0304	0.37	+0.2
324,804	+		Psyr_0304	0.68	+0.0
324,804	+		Psyr_0304	0.68	-1.0
324,846	-		Psyr_0304	0.74	-0.5
324,923	+		Psyr_0304	0.86	-0.4
325,284	+		Psyr_0305	0.20	+0.6
325,477	-		Psyr_0305	0.34	-0.5
325,486	-		Psyr_0305	0.35	-0.5
325,533	+		Psyr_0305	0.38	+0.8
325,534	-		Psyr_0305	0.38	+1.0
325,534	-		Psyr_0305	0.38	+0.3
325,553	+		Psyr_0305	0.40	+0.9
325,599	+		Psyr_0305	0.43	-0.5
325,599	+		Psyr_0305	0.43	+0.1
325,599	+		Psyr_0305	0.43	+1.0
325,599	+		Psyr_0305	0.43	+0.5
325,600	-		Psyr_0305	0.43	+0.7
325,600	-		Psyr_0305	0.43	-0.5
325,600	-		Psyr_0305	0.43	+0.4
325,600	-		Psyr_0305	0.43	+2.2
325,626	+		Psyr_0305	0.45	-0.9
325,626	+		Psyr_0305	0.45	+0.1
325,626	+		Psyr_0305	0.45	+0.2
325,626	+		Psyr_0305	0.45	+0.2
325,627	-		Psyr_0305	0.45	-0.1
325,627	-		Psyr_0305	0.45	-0.3
325,627	-		Psyr_0305	0.45	-1.2
325,627	-		Psyr_0305	0.45	+0.5
325,627	-		Psyr_0305	0.45	+0.8
325,677	+		Psyr_0305	0.49	-0.2
325,701	+		Psyr_0305	0.51	+0.6
325,701	+		Psyr_0305	0.51	+0.2
325,702	-		Psyr_0305	0.51	+0.4
325,702	-		Psyr_0305	0.51	+1.3
325,797	+		Psyr_0305	0.58	+1.3
325,797	+		Psyr_0305	0.58	+0.8
325,797	+		Psyr_0305	0.58	-1.3
325,798	-		Psyr_0305	0.58	+1.6
325,798	-		Psyr_0305	0.58	+1.2
325,798	-		Psyr_0305	0.58	+0.8
325,798	-		Psyr_0305	0.58	-0.8
325,798	-		Psyr_0305	0.58	+0.9
325,798	-		Psyr_0305	0.58	-0.3
325,798	-		Psyr_0305	0.58	+0.9
326,088	+		Psyr_0305	0.79	+0.1
326,089	-		Psyr_0305	0.79	-0.0
326,089	-		Psyr_0305	0.79	+1.1
326,089	-		Psyr_0305	0.79	+0.6
326,189	-		Psyr_0305	0.87	-1.5
326,244	+				-0.5
326,244	+				-0.3
326,244	+				-0.5
326,244	+				-0.6
326,245	-				+0.9
326,245	-				-0.2
326,301	+				-0.3
326,384	+				+0.7
326,487	+				-0.9
326,500	+				+0.1
326,509	-				+0.2
326,523	+				+0.4
326,523	+				-0.2
326,523	+				+1.5
326,540	-				-0.0
326,588	-				-0.3
326,588	-				-0.6
326,588	-				-0.7
326,588	-				+0.2
326,588	-				+0.1
326,637	-				+0.3
326,637	-				+0.3
326,637	-				-0.0
326,719	+		Psyr_0306	0.11	-0.7
326,721	+		Psyr_0306	0.12	-1.3
326,721	+		Psyr_0306	0.12	-0.8
326,721	+		Psyr_0306	0.12	-1.3
326,721	+		Psyr_0306	0.12	+0.4
326,721	+		Psyr_0306	0.12	-0.9
326,722	-		Psyr_0306	0.12	-0.3
326,722	-		Psyr_0306	0.12	-0.5
326,722	-		Psyr_0306	0.12	-1.5
326,722	-		Psyr_0306	0.12	+0.5
326,722	-		Psyr_0306	0.12	+0.2
326,892	+		Psyr_0306	0.37	-1.0
326,893	-		Psyr_0306	0.38	-0.7
326,895	-		Psyr_0306	0.38	+2.1
326,895	-		Psyr_0306	0.38	+0.3
327,080	+		Psyr_0306	0.66	-1.6
327,081	-		Psyr_0306	0.66	-0.7
327,235	-		Psyr_0306	0.89	-0.1
327,243	+				+0.5
327,325	+				+0.2
327,325	+				+0.5
327,325	+				-0.4
327,325	+				-0.1
327,325	+				-0.4
327,325	+				-0.5
327,326	-				-0.4
327,326	-				+1.1
327,326	-				-0.1
327,326	-				-0.3
327,355	-				-0.0
327,355	-				+0.1
327,355	-				-0.0