Experiment: Methyl-B-D-galactopyranoside 20mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2303 and Echvi_2304 are separated by 9 nucleotides Echvi_2304 and Echvi_2305 are separated by 180 nucleotides
Echvi_2303: Echvi_2303 - hypothetical protein, at 2,735,323 to 2,736,792
_2303
Echvi_2304: Echvi_2304 - ABC-type multidrug transport system, ATPase component, at 2,736,802 to 2,737,521
_2304
Echvi_2305: Echvi_2305 - Protease II, at 2,737,702 to 2,739,774
_2305
Position (kb)
2736
2737
2738 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2735.852 kb on + strand, within Echvi_2303 at 2735.867 kb on - strand, within Echvi_2303 at 2735.893 kb on + strand, within Echvi_2303 at 2735.894 kb on - strand, within Echvi_2303 at 2735.894 kb on - strand, within Echvi_2303 at 2735.894 kb on - strand, within Echvi_2303 at 2736.007 kb on + strand, within Echvi_2303 at 2736.111 kb on + strand, within Echvi_2303 at 2736.111 kb on + strand, within Echvi_2303 at 2736.111 kb on + strand, within Echvi_2303 at 2736.111 kb on + strand, within Echvi_2303 at 2736.111 kb on + strand, within Echvi_2303 at 2736.112 kb on - strand, within Echvi_2303 at 2736.211 kb on + strand, within Echvi_2303 at 2736.212 kb on - strand, within Echvi_2303 at 2736.283 kb on + strand, within Echvi_2303 at 2736.283 kb on + strand, within Echvi_2303 at 2736.284 kb on - strand, within Echvi_2303 at 2736.300 kb on + strand, within Echvi_2303 at 2736.307 kb on + strand, within Echvi_2303 at 2736.307 kb on + strand, within Echvi_2303 at 2736.307 kb on + strand, within Echvi_2303 at 2736.308 kb on - strand, within Echvi_2303 at 2736.308 kb on - strand, within Echvi_2303 at 2736.350 kb on - strand, within Echvi_2303 at 2736.350 kb on - strand, within Echvi_2303 at 2736.381 kb on - strand, within Echvi_2303 at 2736.381 kb on - strand, within Echvi_2303 at 2736.415 kb on + strand, within Echvi_2303 at 2736.415 kb on + strand, within Echvi_2303 at 2736.415 kb on + strand, within Echvi_2303 at 2736.422 kb on - strand, within Echvi_2303 at 2736.439 kb on + strand, within Echvi_2303 at 2736.466 kb on + strand, within Echvi_2303 at 2736.466 kb on + strand, within Echvi_2303 at 2736.466 kb on + strand, within Echvi_2303 at 2736.467 kb on - strand, within Echvi_2303 at 2736.467 kb on - strand, within Echvi_2303 at 2736.468 kb on + strand, within Echvi_2303 at 2736.487 kb on + strand, within Echvi_2303 at 2736.488 kb on - strand, within Echvi_2303 at 2736.488 kb on - strand, within Echvi_2303 at 2736.488 kb on - strand, within Echvi_2303 at 2736.490 kb on - strand, within Echvi_2303 at 2736.608 kb on + strand, within Echvi_2303 at 2736.612 kb on - strand, within Echvi_2303 at 2736.626 kb on + strand, within Echvi_2303 at 2736.626 kb on + strand, within Echvi_2303 at 2736.626 kb on + strand, within Echvi_2303 at 2736.627 kb on - strand, within Echvi_2303 at 2736.627 kb on - strand, within Echvi_2303 at 2736.627 kb on - strand, within Echvi_2303 at 2736.627 kb on - strand, within Echvi_2303 at 2736.628 kb on + strand, within Echvi_2303 at 2736.628 kb on + strand, within Echvi_2303 at 2736.628 kb on + strand, within Echvi_2303 at 2736.629 kb on - strand, within Echvi_2303 at 2736.629 kb on - strand, within Echvi_2303 at 2736.629 kb on - strand, within Echvi_2303 at 2736.629 kb on - strand, within Echvi_2303 at 2736.645 kb on + strand, within Echvi_2303 at 2736.646 kb on - strand at 2736.650 kb on + strand at 2736.651 kb on - strand at 2736.651 kb on - strand at 2736.658 kb on + strand at 2736.658 kb on + strand at 2736.667 kb on + strand at 2736.758 kb on - strand at 2736.802 kb on - strand at 2736.812 kb on + strand at 2736.833 kb on - strand at 2736.906 kb on + strand, within Echvi_2304 at 2736.933 kb on + strand, within Echvi_2304 at 2736.951 kb on + strand, within Echvi_2304 at 2736.974 kb on + strand, within Echvi_2304 at 2736.974 kb on + strand, within Echvi_2304 at 2736.975 kb on - strand, within Echvi_2304 at 2736.977 kb on + strand, within Echvi_2304 at 2736.978 kb on - strand, within Echvi_2304 at 2736.989 kb on + strand, within Echvi_2304 at 2736.990 kb on - strand, within Echvi_2304 at 2736.990 kb on - strand, within Echvi_2304 at 2737.021 kb on + strand, within Echvi_2304 at 2737.022 kb on - strand, within Echvi_2304 at 2737.022 kb on - strand, within Echvi_2304 at 2737.022 kb on - strand, within Echvi_2304 at 2737.023 kb on + strand, within Echvi_2304 at 2737.036 kb on - strand, within Echvi_2304 at 2737.060 kb on + strand, within Echvi_2304 at 2737.084 kb on + strand, within Echvi_2304 at 2737.091 kb on + strand, within Echvi_2304 at 2737.199 kb on + strand, within Echvi_2304 at 2737.259 kb on + strand, within Echvi_2304 at 2737.259 kb on + strand, within Echvi_2304 at 2737.259 kb on + strand, within Echvi_2304 at 2737.260 kb on - strand, within Echvi_2304 at 2737.260 kb on - strand, within Echvi_2304 at 2737.260 kb on - strand, within Echvi_2304 at 2737.290 kb on - strand, within Echvi_2304 at 2737.296 kb on + strand, within Echvi_2304 at 2737.297 kb on - strand, within Echvi_2304 at 2737.333 kb on + strand, within Echvi_2304 at 2737.333 kb on + strand, within Echvi_2304 at 2737.444 kb on - strand, within Echvi_2304 at 2737.446 kb on + strand, within Echvi_2304 at 2737.447 kb on - strand, within Echvi_2304 at 2737.573 kb on - strand at 2737.579 kb on + strand at 2737.604 kb on + strand at 2737.616 kb on - strand at 2737.640 kb on - strand at 2737.667 kb on + strand at 2737.668 kb on - strand at 2737.678 kb on + strand at 2737.679 kb on - strand at 2737.679 kb on - strand at 2737.679 kb on - strand at 2737.679 kb on - strand at 2737.825 kb on - strand at 2737.831 kb on + strand at 2737.832 kb on - strand at 2737.832 kb on - strand at 2737.885 kb on - strand at 2737.926 kb on + strand, within Echvi_2305 at 2737.927 kb on - strand, within Echvi_2305 at 2737.943 kb on + strand, within Echvi_2305 at 2737.976 kb on + strand, within Echvi_2305 at 2737.977 kb on - strand, within Echvi_2305 at 2737.988 kb on + strand, within Echvi_2305 at 2737.988 kb on + strand, within Echvi_2305 at 2737.988 kb on + strand, within Echvi_2305 at 2737.995 kb on - strand, within Echvi_2305 at 2737.995 kb on - strand, within Echvi_2305 at 2738.070 kb on + strand, within Echvi_2305 at 2738.182 kb on + strand, within Echvi_2305 at 2738.183 kb on - strand, within Echvi_2305 at 2738.201 kb on + strand, within Echvi_2305 at 2738.201 kb on + strand, within Echvi_2305 at 2738.202 kb on - strand, within Echvi_2305 at 2738.202 kb on - strand, within Echvi_2305 at 2738.250 kb on + strand, within Echvi_2305 at 2738.251 kb on - strand, within Echvi_2305 at 2738.347 kb on + strand, within Echvi_2305 at 2738.351 kb on - strand, within Echvi_2305 at 2738.386 kb on - strand, within Echvi_2305 at 2738.449 kb on - strand, within Echvi_2305 at 2738.459 kb on + strand, within Echvi_2305 at 2738.460 kb on - strand, within Echvi_2305 at 2738.460 kb on - strand, within Echvi_2305 at 2738.460 kb on - strand, within Echvi_2305 at 2738.472 kb on + strand, within Echvi_2305 at 2738.472 kb on + strand, within Echvi_2305 at 2738.473 kb on - strand, within Echvi_2305
Per-strain Table
Position Strand Gene LocusTag Fraction Methyl-B-D-galactopyranoside 20mM (C) remove 2,735,852 + Echvi_2303 0.36 -1.5 2,735,867 - Echvi_2303 0.37 +0.6 2,735,893 + Echvi_2303 0.39 -1.8 2,735,894 - Echvi_2303 0.39 -1.6 2,735,894 - Echvi_2303 0.39 +0.7 2,735,894 - Echvi_2303 0.39 +0.3 2,736,007 + Echvi_2303 0.47 +0.4 2,736,111 + Echvi_2303 0.54 -1.5 2,736,111 + Echvi_2303 0.54 -1.1 2,736,111 + Echvi_2303 0.54 -0.6 2,736,111 + Echvi_2303 0.54 -1.1 2,736,111 + Echvi_2303 0.54 -0.3 2,736,112 - Echvi_2303 0.54 +1.6 2,736,211 + Echvi_2303 0.60 -0.7 2,736,212 - Echvi_2303 0.60 +1.1 2,736,283 + Echvi_2303 0.65 +2.2 2,736,283 + Echvi_2303 0.65 +1.0 2,736,284 - Echvi_2303 0.65 -1.7 2,736,300 + Echvi_2303 0.66 -1.4 2,736,307 + Echvi_2303 0.67 +0.5 2,736,307 + Echvi_2303 0.67 -1.4 2,736,307 + Echvi_2303 0.67 +0.8 2,736,308 - Echvi_2303 0.67 +1.8 2,736,308 - Echvi_2303 0.67 +2.2 2,736,350 - Echvi_2303 0.70 +1.6 2,736,350 - Echvi_2303 0.70 -0.7 2,736,381 - Echvi_2303 0.72 +0.6 2,736,381 - Echvi_2303 0.72 +0.7 2,736,415 + Echvi_2303 0.74 +0.1 2,736,415 + Echvi_2303 0.74 +1.1 2,736,415 + Echvi_2303 0.74 +1.9 2,736,422 - Echvi_2303 0.75 +1.3 2,736,439 + Echvi_2303 0.76 +0.6 2,736,466 + Echvi_2303 0.78 -0.5 2,736,466 + Echvi_2303 0.78 +3.6 2,736,466 + Echvi_2303 0.78 +3.3 2,736,467 - Echvi_2303 0.78 -2.3 2,736,467 - Echvi_2303 0.78 -1.0 2,736,468 + Echvi_2303 0.78 -0.7 2,736,487 + Echvi_2303 0.79 -0.4 2,736,488 - Echvi_2303 0.79 -0.6 2,736,488 - Echvi_2303 0.79 -1.5 2,736,488 - Echvi_2303 0.79 -0.4 2,736,490 - Echvi_2303 0.79 -0.3 2,736,608 + Echvi_2303 0.87 -0.1 2,736,612 - Echvi_2303 0.88 +2.3 2,736,626 + Echvi_2303 0.89 +0.9 2,736,626 + Echvi_2303 0.89 -0.1 2,736,626 + Echvi_2303 0.89 -0.2 2,736,627 - Echvi_2303 0.89 +0.1 2,736,627 - Echvi_2303 0.89 +0.6 2,736,627 - Echvi_2303 0.89 +0.5 2,736,627 - Echvi_2303 0.89 -0.9 2,736,628 + Echvi_2303 0.89 +0.9 2,736,628 + Echvi_2303 0.89 -0.7 2,736,628 + Echvi_2303 0.89 +0.8 2,736,629 - Echvi_2303 0.89 -0.5 2,736,629 - Echvi_2303 0.89 +1.6 2,736,629 - Echvi_2303 0.89 -1.5 2,736,629 - Echvi_2303 0.89 +2.1 2,736,645 + Echvi_2303 0.90 +0.5 2,736,646 - -1.0 2,736,650 + +0.5 2,736,651 - -0.6 2,736,651 - +0.8 2,736,658 + -2.2 2,736,658 + -0.3 2,736,667 + -0.1 2,736,758 - +0.4 2,736,802 - +0.7 2,736,812 + +1.5 2,736,833 - -0.4 2,736,906 + Echvi_2304 0.14 +1.0 2,736,933 + Echvi_2304 0.18 +0.2 2,736,951 + Echvi_2304 0.21 -0.2 2,736,974 + Echvi_2304 0.24 -0.1 2,736,974 + Echvi_2304 0.24 +0.0 2,736,975 - Echvi_2304 0.24 +0.6 2,736,977 + Echvi_2304 0.24 +0.9 2,736,978 - Echvi_2304 0.24 -0.1 2,736,989 + Echvi_2304 0.26 -0.2 2,736,990 - Echvi_2304 0.26 +0.9 2,736,990 - Echvi_2304 0.26 -0.3 2,737,021 + Echvi_2304 0.30 +2.5 2,737,022 - Echvi_2304 0.31 +1.5 2,737,022 - Echvi_2304 0.31 -1.1 2,737,022 - Echvi_2304 0.31 +0.5 2,737,023 + Echvi_2304 0.31 +0.7 2,737,036 - Echvi_2304 0.33 -1.4 2,737,060 + Echvi_2304 0.36 -0.0 2,737,084 + Echvi_2304 0.39 +0.3 2,737,091 + Echvi_2304 0.40 +0.3 2,737,199 + Echvi_2304 0.55 +0.8 2,737,259 + Echvi_2304 0.63 +1.3 2,737,259 + Echvi_2304 0.63 +1.1 2,737,259 + Echvi_2304 0.63 +0.0 2,737,260 - Echvi_2304 0.64 -1.4 2,737,260 - Echvi_2304 0.64 -0.4 2,737,260 - Echvi_2304 0.64 -0.2 2,737,290 - Echvi_2304 0.68 +3.3 2,737,296 + Echvi_2304 0.69 +2.4 2,737,297 - Echvi_2304 0.69 +1.2 2,737,333 + Echvi_2304 0.74 -0.6 2,737,333 + Echvi_2304 0.74 +1.5 2,737,444 - Echvi_2304 0.89 +0.1 2,737,446 + Echvi_2304 0.89 +1.3 2,737,447 - Echvi_2304 0.90 -0.3 2,737,573 - +2.3 2,737,579 + -0.0 2,737,604 + +0.6 2,737,616 - +0.1 2,737,640 - -0.3 2,737,667 + +0.2 2,737,668 - +0.4 2,737,678 + +1.5 2,737,679 - -0.3 2,737,679 - +0.4 2,737,679 - +2.8 2,737,679 - +0.0 2,737,825 - +0.3 2,737,831 + +0.7 2,737,832 - -1.5 2,737,832 - -1.3 2,737,885 - +0.5 2,737,926 + Echvi_2305 0.11 +0.4 2,737,927 - Echvi_2305 0.11 +1.5 2,737,943 + Echvi_2305 0.12 +0.7 2,737,976 + Echvi_2305 0.13 -0.3 2,737,977 - Echvi_2305 0.13 -0.6 2,737,988 + Echvi_2305 0.14 -0.9 2,737,988 + Echvi_2305 0.14 -1.9 2,737,988 + Echvi_2305 0.14 +0.5 2,737,995 - Echvi_2305 0.14 +0.3 2,737,995 - Echvi_2305 0.14 -1.5 2,738,070 + Echvi_2305 0.18 +0.3 2,738,182 + Echvi_2305 0.23 +0.2 2,738,183 - Echvi_2305 0.23 +1.4 2,738,201 + Echvi_2305 0.24 -1.0 2,738,201 + Echvi_2305 0.24 -0.1 2,738,202 - Echvi_2305 0.24 -2.2 2,738,202 - Echvi_2305 0.24 -0.2 2,738,250 + Echvi_2305 0.26 -0.2 2,738,251 - Echvi_2305 0.26 +0.7 2,738,347 + Echvi_2305 0.31 +0.1 2,738,351 - Echvi_2305 0.31 +1.5 2,738,386 - Echvi_2305 0.33 -0.2 2,738,449 - Echvi_2305 0.36 +0.5 2,738,459 + Echvi_2305 0.37 -0.6 2,738,460 - Echvi_2305 0.37 +0.9 2,738,460 - Echvi_2305 0.37 +0.1 2,738,460 - Echvi_2305 0.37 -0.2 2,738,472 + Echvi_2305 0.37 +1.2 2,738,472 + Echvi_2305 0.37 +0.4 2,738,473 - Echvi_2305 0.37 +0.1
Or see this region's nucleotide sequence