Experiment: R2A with bromate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu3276 and Atu3277 are separated by 173 nucleotides Atu3277 and Atu3278 overlap by 1 nucleotides Atu3278 and Atu3279 overlap by 1 nucleotides
Atu3276: Atu3276 - hypothetical protein, at 298,306 to 302,331
Atu3276
Atu3277: Atu3277 - nitrilotriacetate monooxygenase, at 302,505 to 303,029
Atu3277
Atu3278: Atu3278 - aryl-alcohol dehydrogenase, at 303,029 to 303,922
Atu3278
Atu3279: Atu3279 - methanesulfonate sulfonatase, at 303,922 to 305,079
Atu3279
Position (kb) 302
303
304 Strain fitness (log2 ratio) -1
0
1
2
3 at 301.523 kb on - strand, within Atu3276 at 301.562 kb on + strand, within Atu3276 at 301.570 kb on - strand, within Atu3276 at 301.601 kb on + strand, within Atu3276 at 301.609 kb on - strand, within Atu3276 at 301.612 kb on - strand, within Atu3276 at 301.614 kb on - strand, within Atu3276 at 301.622 kb on - strand, within Atu3276 at 301.635 kb on - strand, within Atu3276 at 301.635 kb on - strand, within Atu3276 at 301.743 kb on - strand, within Atu3276 at 301.763 kb on - strand, within Atu3276 at 301.790 kb on - strand, within Atu3276 at 301.800 kb on + strand, within Atu3276 at 301.855 kb on + strand, within Atu3276 at 301.938 kb on + strand at 301.959 kb on + strand at 301.986 kb on + strand at 302.024 kb on + strand at 302.024 kb on + strand at 302.024 kb on - strand at 302.032 kb on - strand at 302.092 kb on - strand at 302.102 kb on - strand at 302.104 kb on + strand at 302.112 kb on - strand at 302.114 kb on + strand at 302.114 kb on + strand at 302.122 kb on - strand at 302.122 kb on - strand at 302.122 kb on - strand at 302.234 kb on + strand at 302.242 kb on + strand at 302.250 kb on - strand at 302.300 kb on - strand at 302.442 kb on - strand at 302.447 kb on + strand at 302.488 kb on + strand at 302.503 kb on + strand at 302.503 kb on + strand at 302.511 kb on - strand at 302.511 kb on - strand at 302.582 kb on - strand, within Atu3277 at 302.591 kb on + strand, within Atu3277 at 302.612 kb on + strand, within Atu3277 at 302.668 kb on - strand, within Atu3277 at 302.807 kb on + strand, within Atu3277 at 302.926 kb on - strand, within Atu3277 at 302.935 kb on + strand, within Atu3277 at 303.064 kb on + strand at 303.064 kb on - strand at 303.064 kb on - strand at 303.081 kb on - strand at 303.122 kb on - strand, within Atu3278 at 303.183 kb on - strand, within Atu3278 at 303.214 kb on + strand, within Atu3278 at 303.261 kb on + strand, within Atu3278 at 303.261 kb on + strand, within Atu3278 at 303.296 kb on + strand, within Atu3278 at 303.304 kb on - strand, within Atu3278 at 303.401 kb on + strand, within Atu3278 at 303.443 kb on - strand, within Atu3278 at 303.459 kb on + strand, within Atu3278 at 303.459 kb on + strand, within Atu3278 at 303.459 kb on + strand, within Atu3278 at 303.467 kb on - strand, within Atu3278 at 303.467 kb on - strand, within Atu3278 at 303.467 kb on - strand, within Atu3278 at 303.508 kb on + strand, within Atu3278 at 303.602 kb on + strand, within Atu3278 at 303.605 kb on - strand, within Atu3278 at 303.629 kb on - strand, within Atu3278 at 303.642 kb on + strand, within Atu3278 at 303.655 kb on - strand, within Atu3278 at 303.718 kb on + strand, within Atu3278 at 303.740 kb on + strand, within Atu3278 at 303.749 kb on + strand, within Atu3278 at 303.775 kb on + strand, within Atu3278 at 303.775 kb on + strand, within Atu3278 at 303.783 kb on - strand, within Atu3278 at 303.794 kb on - strand, within Atu3278 at 303.807 kb on + strand, within Atu3278 at 303.877 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with bromate 5 mM remove 301,523 - Atu3276 0.80 +0.0 301,562 + Atu3276 0.81 +1.4 301,570 - Atu3276 0.81 +0.6 301,601 + Atu3276 0.82 -0.2 301,609 - Atu3276 0.82 -0.1 301,612 - Atu3276 0.82 +0.3 301,614 - Atu3276 0.82 +0.1 301,622 - Atu3276 0.82 +0.9 301,635 - Atu3276 0.83 -0.3 301,635 - Atu3276 0.83 +0.2 301,743 - Atu3276 0.85 +0.4 301,763 - Atu3276 0.86 +0.0 301,790 - Atu3276 0.87 +0.3 301,800 + Atu3276 0.87 +0.4 301,855 + Atu3276 0.88 +0.3 301,938 + +0.3 301,959 + -0.3 301,986 + +0.1 302,024 + +1.9 302,024 + -0.6 302,024 - -0.2 302,032 - -0.3 302,092 - -0.2 302,102 - -0.4 302,104 + -0.2 302,112 - -0.4 302,114 + +0.3 302,114 + +0.8 302,122 - +0.1 302,122 - +0.1 302,122 - +0.9 302,234 + +1.4 302,242 + +0.0 302,250 - -1.0 302,300 - +0.1 302,442 - -0.1 302,447 + -0.0 302,488 + -0.8 302,503 + -0.1 302,503 + -0.2 302,511 - +0.9 302,511 - -0.1 302,582 - Atu3277 0.15 -0.7 302,591 + Atu3277 0.16 +0.8 302,612 + Atu3277 0.20 +0.2 302,668 - Atu3277 0.31 -1.1 302,807 + Atu3277 0.58 +0.3 302,926 - Atu3277 0.80 -0.2 302,935 + Atu3277 0.82 +0.1 303,064 + -0.6 303,064 - +0.3 303,064 - -0.4 303,081 - -0.4 303,122 - Atu3278 0.10 +2.8 303,183 - Atu3278 0.17 -0.4 303,214 + Atu3278 0.21 -0.7 303,261 + Atu3278 0.26 +0.0 303,261 + Atu3278 0.26 -0.1 303,296 + Atu3278 0.30 -0.3 303,304 - Atu3278 0.31 +0.0 303,401 + Atu3278 0.42 +0.1 303,443 - Atu3278 0.46 +0.3 303,459 + Atu3278 0.48 +1.9 303,459 + Atu3278 0.48 +1.9 303,459 + Atu3278 0.48 +0.9 303,467 - Atu3278 0.49 -0.1 303,467 - Atu3278 0.49 -0.2 303,467 - Atu3278 0.49 +0.1 303,508 + Atu3278 0.54 +0.0 303,602 + Atu3278 0.64 +0.1 303,605 - Atu3278 0.64 +0.8 303,629 - Atu3278 0.67 +0.5 303,642 + Atu3278 0.69 -0.2 303,655 - Atu3278 0.70 -0.1 303,718 + Atu3278 0.77 +0.3 303,740 + Atu3278 0.80 -0.5 303,749 + Atu3278 0.81 +0.2 303,775 + Atu3278 0.83 +0.3 303,775 + Atu3278 0.83 -1.4 303,783 - Atu3278 0.84 -0.0 303,794 - Atu3278 0.86 +0.3 303,807 + Atu3278 0.87 -0.2 303,877 + +1.3
Or see this region's nucleotide sequence