Strain Fitness in Agrobacterium fabrum C58 around Atu2507

Experiment: R2A with bromate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with bromate 5 mM
2,474,346	+				-0.4
2,474,349	-				-0.5
2,474,412	+				-0.2
2,474,435	-				-0.7
2,474,435	-				-0.0
2,474,435	-				-0.3
2,474,435	-				+2.2
2,474,448	-				-0.1
2,474,519	+		Atu2506	0.15	+0.0
2,474,519	+		Atu2506	0.15	-0.1
2,474,519	+		Atu2506	0.15	-0.0
2,474,537	-		Atu2506	0.17	+0.5
2,474,537	-		Atu2506	0.17	-0.2
2,474,539	-		Atu2506	0.17	+0.2
2,474,554	+		Atu2506	0.19	-0.3
2,474,562	-		Atu2506	0.19	-0.2
2,474,601	-		Atu2506	0.24	-0.2
2,474,645	+		Atu2506	0.28	+0.3
2,474,645	+		Atu2506	0.28	-0.6
2,474,645	+		Atu2506	0.28	-0.1
2,474,645	+		Atu2506	0.28	+0.5
2,474,645	+		Atu2506	0.28	-0.7
2,474,645	+		Atu2506	0.28	+0.8
2,474,645	+		Atu2506	0.28	+0.1
2,474,645	+		Atu2506	0.28	-0.2
2,474,645	+		Atu2506	0.28	+0.2
2,474,653	-		Atu2506	0.29	-0.5
2,474,653	-		Atu2506	0.29	-0.2
2,474,653	-		Atu2506	0.29	+0.4
2,474,653	-		Atu2506	0.29	+0.2
2,474,653	-		Atu2506	0.29	+0.1
2,474,653	-		Atu2506	0.29	-0.2
2,474,653	-		Atu2506	0.29	+0.1
2,474,673	+		Atu2506	0.31	+0.2
2,474,797	-		Atu2506	0.45	-0.5
2,474,797	-		Atu2506	0.45	-0.6
2,474,797	-		Atu2506	0.45	-0.4
2,474,797	-		Atu2506	0.45	+0.9
2,474,811	-		Atu2506	0.46	+0.1
2,474,831	-		Atu2506	0.48	+0.5
2,474,831	-		Atu2506	0.48	+0.2
2,474,909	+		Atu2506	0.56	+0.4
2,474,936	+		Atu2506	0.59	+0.2
2,474,945	+		Atu2506	0.60	+0.5
2,474,954	+		Atu2506	0.61	+0.0
2,474,967	+		Atu2506	0.63	-1.9
2,474,975	+		Atu2506	0.63	-0.4
2,474,990	-		Atu2506	0.65	+0.7
2,474,990	-		Atu2506	0.65	-0.1
2,475,034	+		Atu2506	0.70	-0.0
2,475,098	+		Atu2506	0.77	-1.0
2,475,257	+				+1.3
2,475,306	+				-1.2
2,475,309	-				+0.8
2,475,316	+				+0.7
2,475,501	+		Atu2507	0.22	-0.3
2,475,509	-		Atu2507	0.23	+0.0
2,475,594	-		Atu2507	0.33	-0.0
2,475,669	+		Atu2507	0.42	+0.1
2,475,787	+		Atu2507	0.56	-0.2
2,475,823	+		Atu2507	0.60	-0.1
2,475,830	-		Atu2507	0.61	+0.4
2,475,831	-		Atu2507	0.61	+0.6
2,475,975	+		Atu2507	0.79	+0.3
2,476,004	+		Atu2507	0.82	-0.4
2,476,035	+		Atu2507	0.86	+0.1
2,476,035	+		Atu2507	0.86	+0.0
2,476,038	-		Atu2507	0.86	+0.6
2,476,038	-		Atu2507	0.86	+0.6
2,476,043	-		Atu2507	0.87	-0.2
2,476,109	-				-0.9
2,476,124	-				+0.0
2,476,174	-				+0.4
2,476,174	-				-0.3
2,476,263	-				+1.2
2,476,281	+				-1.5
2,476,297	+				-0.3
2,476,389	-		Atu2508	0.12	+2.2
2,476,416	-		Atu2508	0.15	+0.6
2,476,419	-		Atu2508	0.15	-0.3
2,476,438	+		Atu2508	0.17	+0.1
2,476,597	-		Atu2508	0.32	+0.8
2,476,597	-		Atu2508	0.32	-0.0
2,476,606	-		Atu2508	0.33	-0.6
2,476,678	-		Atu2508	0.40	+0.3
2,476,683	+		Atu2508	0.40	-0.3
2,476,781	+		Atu2508	0.49	-0.2
2,476,789	-		Atu2508	0.50	+0.2
2,476,789	-		Atu2508	0.50	+0.0
2,476,789	-		Atu2508	0.50	-0.2
2,476,832	+		Atu2508	0.54	+0.1
2,476,835	-		Atu2508	0.55	-0.5
2,476,838	+		Atu2508	0.55	-0.3
2,476,846	-		Atu2508	0.56	+0.9
2,476,917	+		Atu2508	0.62	-0.1
2,476,937	+		Atu2508	0.64	+0.0
2,477,023	+		Atu2508	0.72	+0.3
2,477,100	+		Atu2508	0.80	-0.4
2,477,147	+		Atu2508	0.84	-0.7
2,477,147	+		Atu2508	0.84	-0.3