Strain Fitness in Escherichia coli BW25113 around b3389

Experiment: 3-methyl-3-butenol 0.31 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	3-methyl-3-butenol 0.31 vol%
3,514,426	-	damX	b3388	0.30	+0.1
3,514,475	-	damX	b3388	0.34	+0.1
3,514,475	-	damX	b3388	0.34	+1.1
3,514,486	+	damX	b3388	0.34	-0.2
3,514,488	+	damX	b3388	0.35	-0.8
3,514,488	+	damX	b3388	0.35	+0.4
3,514,496	-	damX	b3388	0.35	-0.6
3,514,536	+	damX	b3388	0.38	-1.5
3,514,547	+	damX	b3388	0.39	+0.4
3,514,549	-	damX	b3388	0.39	+1.7
3,514,571	+	damX	b3388	0.41	+1.0
3,514,571	+	damX	b3388	0.41	-0.6
3,514,571	+	damX	b3388	0.41	-0.2
3,514,589	+	damX	b3388	0.43	+0.7
3,514,589	+	damX	b3388	0.43	-0.1
3,514,612	-	damX	b3388	0.44	+0.9
3,514,612	-	damX	b3388	0.44	-0.6
3,514,614	+	damX	b3388	0.44	-0.8
3,514,614	-	damX	b3388	0.44	-0.5
3,514,682	+	damX	b3388	0.50	-0.2
3,514,682	+	damX	b3388	0.50	-0.8
3,514,682	+	damX	b3388	0.50	+1.4
3,514,685	-	damX	b3388	0.50	-0.1
3,514,721	+	damX	b3388	0.53	+0.7
3,514,723	+	damX	b3388	0.53	-0.7
3,514,723	+	damX	b3388	0.53	+0.3
3,514,723	+	damX	b3388	0.53	-0.9
3,514,723	+	damX	b3388	0.53	-0.7
3,514,731	-	damX	b3388	0.54	-0.1
3,514,731	-	damX	b3388	0.54	-0.6
3,514,735	-	damX	b3388	0.54	-0.8
3,514,740	-	damX	b3388	0.54	+0.4
3,514,740	-	damX	b3388	0.54	+0.8
3,514,740	-	damX	b3388	0.54	+1.0
3,514,749	+	damX	b3388	0.55	-0.9
3,514,791	+	damX	b3388	0.58	-1.0
3,514,799	+	damX	b3388	0.59	+0.2
3,514,799	-	damX	b3388	0.59	+0.7
3,514,799	-	damX	b3388	0.59	+1.0
3,514,799	-	damX	b3388	0.59	-0.6
3,514,801	-	damX	b3388	0.59	-0.0
3,514,825	-	damX	b3388	0.61	-0.5
3,514,861	+	damX	b3388	0.64	+0.5
3,514,869	-	damX	b3388	0.64	+0.3
3,514,907	-	damX	b3388	0.67	-0.3
3,515,000	-	damX	b3388	0.74	-0.6
3,515,015	+	damX	b3388	0.76	+0.6
3,515,015	+	damX	b3388	0.76	-0.0
3,515,020	+	damX	b3388	0.76	-0.9
3,515,020	+	damX	b3388	0.76	+1.4
3,515,023	-	damX	b3388	0.76	+1.3
3,515,023	-	damX	b3388	0.76	-0.7
3,515,091	-	damX	b3388	0.82	+0.5
3,515,191	+	damX	b3388	0.89	-0.8
3,515,232	-				+1.0
3,515,232	-				+0.2
3,515,246	-				+0.1
3,515,255	-				+1.1
3,515,289	+				+0.6
3,515,346	+				-0.5
3,515,348	-				+0.2
3,515,368	-				-0.3
3,515,380	+				-0.5
3,515,425	-				+0.4
3,515,425	-				+0.9
3,515,435	-				-0.2
3,515,447	-				+0.2
3,515,452	+				-1.4
3,515,549	-	aroB	b3389	0.12	-2.3
3,515,555	+	aroB	b3389	0.12	-1.4
3,515,570	-	aroB	b3389	0.14	-1.0
3,515,570	-	aroB	b3389	0.14	-1.5
3,515,592	+	aroB	b3389	0.16	-1.3
3,515,592	+	aroB	b3389	0.16	-1.0
3,515,598	+	aroB	b3389	0.16	-0.4
3,515,624	+	aroB	b3389	0.19	-0.6
3,515,631	-	aroB	b3389	0.19	+0.7
3,515,633	-	aroB	b3389	0.20	+1.1
3,515,633	-	aroB	b3389	0.20	-0.2
3,515,633	-	aroB	b3389	0.20	-1.6
3,515,649	+	aroB	b3389	0.21	+0.4
3,515,649	+	aroB	b3389	0.21	-0.3
3,515,649	+	aroB	b3389	0.21	-0.4
3,515,657	-	aroB	b3389	0.22	-1.1
3,515,717	-	aroB	b3389	0.27	-0.4
3,515,723	-	aroB	b3389	0.28	+0.3
3,515,743	-	aroB	b3389	0.30	-1.2
3,515,753	-	aroB	b3389	0.31	-0.0
3,515,758	+	aroB	b3389	0.31	-0.0
3,515,758	+	aroB	b3389	0.31	-0.6
3,515,758	+	aroB	b3389	0.31	-0.4
3,515,770	+	aroB	b3389	0.32	-0.5
3,515,770	+	aroB	b3389	0.32	-0.0
3,515,794	-	aroB	b3389	0.34	-0.6
3,515,824	+	aroB	b3389	0.37	-0.8
3,515,848	+	aroB	b3389	0.39	+0.1
3,515,851	+	aroB	b3389	0.40	-0.6
3,515,864	-	aroB	b3389	0.41	-1.3
3,515,873	+	aroB	b3389	0.42	-0.3
3,515,874	-	aroB	b3389	0.42	-1.5
3,515,876	+	aroB	b3389	0.42	-0.6
3,515,930	+	aroB	b3389	0.47	+0.5
3,515,967	-	aroB	b3389	0.50	-0.6
3,516,005	+	aroB	b3389	0.54	-1.5
3,516,024	+	aroB	b3389	0.55	-1.0
3,516,079	-	aroB	b3389	0.61	-1.7
3,516,079	-	aroB	b3389	0.61	-0.5
3,516,104	+	aroB	b3389	0.63	-0.4
3,516,174	-	aroB	b3389	0.69	-1.2
3,516,190	+	aroB	b3389	0.71	-0.3
3,516,221	+	aroB	b3389	0.74	-1.5
3,516,221	+	aroB	b3389	0.74	-1.3
3,516,222	-	aroB	b3389	0.74	-2.1
3,516,226	-	aroB	b3389	0.74	-1.3
3,516,258	-	aroB	b3389	0.77	-0.8
3,516,285	-	aroB	b3389	0.79	-0.3
3,516,285	-	aroB	b3389	0.79	+1.4
3,516,319	+	aroB	b3389	0.83	-0.7
3,516,319	+	aroB	b3389	0.83	-1.0
3,516,393	+				-1.2
3,516,402	-				-0.8
3,516,496	-				-0.8
3,516,501	-				-0.4
3,516,549	+				-0.5
3,516,554	-				-0.0
3,516,554	-				+0.1
3,516,554	-				-1.9
3,516,626	+	aroK	b3390	0.12	-0.1
3,516,661	-	aroK	b3390	0.18	-1.4
3,516,793	+	aroK	b3390	0.44	-1.8
3,516,801	+	aroK	b3390	0.45	-1.4
3,516,801	+	aroK	b3390	0.45	-0.9
3,516,858	-	aroK	b3390	0.56	-1.2
3,517,041	-				+0.4
3,517,046	+				-0.7
3,517,054	-				-0.9
3,517,066	-				-1.2
3,517,107	-				+0.8
3,517,144	+				-1.6
3,517,152	-				-0.2
3,517,164	+				+0.8
3,517,207	+				-0.4
3,517,224	-				+0.3
3,517,228	+				-0.7
3,517,247	+				+0.5
3,517,283	-				-0.7
3,517,360	-				+0.2
3,517,389	-				-1.1
3,517,426	-				-0.2
3,517,437	+				+0.6
3,517,441	-				-1.1
3,517,441	-				+0.0