Strain Fitness in Escherichia coli BW25113 around b2026
Experiment: 3-methyl-3-butenol 0.31 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 3-methyl-3-butenol 0.31 vol% |
---|---|---|---|---|---|
remove | |||||
2,093,818 | - | +0.2 | |||
2,093,818 | - | -0.0 | |||
2,093,881 | + | +0.5 | |||
2,093,918 | + | +0.7 | |||
2,093,978 | + | hisF | b2025 | 0.14 | +1.8 |
2,094,236 | + | hisF | b2025 | 0.47 | -0.0 |
2,094,236 | + | hisF | b2025 | 0.47 | +0.1 |
2,094,236 | + | hisF | b2025 | 0.47 | +0.4 |
2,094,244 | - | hisF | b2025 | 0.48 | -0.5 |
2,094,244 | - | hisF | b2025 | 0.48 | -0.1 |
2,094,248 | - | hisF | b2025 | 0.49 | -0.5 |
2,094,338 | - | hisF | b2025 | 0.60 | +0.1 |
2,094,596 | + | +0.5 | |||
2,094,596 | + | +0.2 | |||
2,094,647 | + | +0.7 | |||
2,094,712 | - | hisI | b2026 | 0.12 | +0.6 |
2,094,712 | - | hisI | b2026 | 0.12 | -0.4 |
2,094,716 | + | hisI | b2026 | 0.13 | -0.2 |
2,094,869 | + | hisI | b2026 | 0.38 | +0.6 |
2,094,907 | - | hisI | b2026 | 0.44 | +0.4 |
2,094,907 | - | hisI | b2026 | 0.44 | +0.2 |
2,095,032 | + | hisI | b2026 | 0.64 | +0.2 |
2,095,033 | + | hisI | b2026 | 0.65 | +0.3 |
2,095,033 | + | hisI | b2026 | 0.65 | +0.7 |
2,095,124 | + | hisI | b2026 | 0.79 | -0.3 |
2,095,167 | + | hisI | b2026 | 0.86 | -0.0 |
2,095,202 | - | +0.2 | |||
2,095,231 | + | +0.2 | |||
2,095,386 | - | +0.4 | |||
2,095,490 | + | wzzB | b2027 | 0.15 | -2.0 |
2,095,494 | + | wzzB | b2027 | 0.15 | +0.1 |
2,095,586 | - | wzzB | b2027 | 0.25 | +0.5 |
2,095,586 | - | wzzB | b2027 | 0.25 | +1.6 |
2,095,606 | - | wzzB | b2027 | 0.27 | -0.2 |
2,095,719 | - | wzzB | b2027 | 0.38 | +0.5 |
2,095,719 | - | wzzB | b2027 | 0.38 | +0.4 |
2,095,729 | - | wzzB | b2027 | 0.39 | -0.0 |
2,095,819 | + | wzzB | b2027 | 0.48 | -0.3 |
2,095,819 | + | wzzB | b2027 | 0.48 | -0.8 |
2,095,900 | + | wzzB | b2027 | 0.57 | -0.9 |
2,095,900 | + | wzzB | b2027 | 0.57 | +0.3 |
2,096,075 | + | wzzB | b2027 | 0.74 | +0.7 |
2,096,075 | + | wzzB | b2027 | 0.74 | +0.4 |
2,096,102 | + | wzzB | b2027 | 0.77 | -0.0 |
2,096,163 | - | wzzB | b2027 | 0.83 | -1.5 |
Or see this region's nucleotide sequence