Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_2871

Experiment: KB with Rotenone 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Rotenone 0.125 mg/ml
3,444,496	-		Psyr_2869	0.64	+0.1
3,444,510	+		Psyr_2869	0.65	-2.1
3,444,511	-		Psyr_2869	0.65	+0.6
3,444,588	+		Psyr_2869	0.71	-0.7
3,444,804	+		Psyr_2869	0.86	-1.1
3,444,813	+		Psyr_2869	0.87	-0.7
3,444,813	+		Psyr_2869	0.87	-0.5
3,444,814	-		Psyr_2869	0.87	-2.1
3,444,814	-		Psyr_2869	0.87	-0.7
3,444,904	-				+1.5
3,444,904	-				-0.2
3,444,904	-				+0.5
3,444,904	-				+0.4
3,445,000	+				+1.4
3,445,000	+				+0.5
3,445,000	+				-0.4
3,445,000	+				-0.2
3,445,000	+				+0.7
3,445,000	+				-0.6
3,445,000	+				-1.4
3,445,001	-				+0.7
3,445,001	-				-0.8
3,445,001	-				-0.6
3,445,001	-				-0.8
3,445,001	-				-0.5
3,445,001	-				+0.7
3,445,001	-				+0.9
3,445,001	-				+0.6
3,445,001	-				+0.2
3,445,001	-				+0.4
3,445,001	-				-2.4
3,445,006	+				-0.7
3,445,006	+				+0.9
3,445,006	+				+0.9
3,445,006	+				-0.7
3,445,007	-				-0.6
3,445,007	-				+0.9
3,445,136	+		Psyr_2870	0.30	-1.1
3,445,137	-		Psyr_2870	0.30	+0.8
3,445,294	+		Psyr_2870	0.66	-0.6
3,445,427	+				-0.2
3,445,451	+				-0.7
3,445,452	-				+0.1
3,445,812	-		Psyr_2871	0.29	+0.2
3,446,022	+		Psyr_2871	0.46	-0.6
3,446,023	-		Psyr_2871	0.46	+1.0
3,446,023	-		Psyr_2871	0.46	+0.2
3,446,317	+		Psyr_2871	0.70	+1.2
3,446,317	+		Psyr_2871	0.70	+1.5
3,446,317	+		Psyr_2871	0.70	-1.1
3,446,446	+		Psyr_2871	0.81	-1.1
3,446,446	+		Psyr_2871	0.81	-0.2
3,446,446	+		Psyr_2871	0.81	-0.4
3,446,447	-		Psyr_2871	0.81	+2.8
3,446,447	-		Psyr_2871	0.81	-0.3
3,446,447	-		Psyr_2871	0.81	-0.6
3,446,467	+		Psyr_2871	0.83	-0.4
3,446,888	+		Psyr_2872	0.72	-0.4
3,447,096	+				-0.6
3,447,573	+		Psyr_2873	0.38	-0.0
3,447,574	-		Psyr_2873	0.38	-0.1
3,447,574	-		Psyr_2873	0.38	-1.2
3,447,574	-		Psyr_2873	0.38	+0.9
3,447,574	-		Psyr_2873	0.38	+0.4
3,447,576	+		Psyr_2873	0.38	+0.7
3,447,576	+		Psyr_2873	0.38	+0.2
3,447,577	-		Psyr_2873	0.38	-1.1
3,447,577	-		Psyr_2873	0.38	-2.0