Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_2688

Experiment: KB with Rotenone 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Rotenone 0.125 mg/ml
3,262,660	+		Psyr_2687	0.37	+0.2
3,262,661	-		Psyr_2687	0.37	+0.8
3,262,744	+		Psyr_2687	0.43	-0.2
3,262,744	+		Psyr_2687	0.43	+0.8
3,262,744	+		Psyr_2687	0.43	-0.1
3,262,744	+		Psyr_2687	0.43	-1.0
3,262,745	-		Psyr_2687	0.43	-1.3
3,262,745	-		Psyr_2687	0.43	+0.8
3,262,745	-		Psyr_2687	0.43	+0.6
3,262,745	-		Psyr_2687	0.43	-0.2
3,262,745	-		Psyr_2687	0.43	-0.1
3,262,745	-		Psyr_2687	0.43	-0.5
3,262,745	-		Psyr_2687	0.43	-0.0
3,262,745	-		Psyr_2687	0.43	-1.0
3,262,769	-		Psyr_2687	0.45	-0.6
3,262,769	-		Psyr_2687	0.45	+1.0
3,262,774	+		Psyr_2687	0.45	+0.5
3,262,774	+		Psyr_2687	0.45	+0.1
3,262,775	-		Psyr_2687	0.45	-0.9
3,262,839	+		Psyr_2687	0.50	+1.0
3,262,839	+		Psyr_2687	0.50	-0.4
3,262,839	+		Psyr_2687	0.50	+1.7
3,262,839	+		Psyr_2687	0.50	+0.7
3,262,851	-		Psyr_2687	0.51	+0.7
3,262,851	-		Psyr_2687	0.51	+0.1
3,263,055	+		Psyr_2687	0.65	+0.3
3,263,056	-		Psyr_2687	0.65	+0.4
3,263,056	-		Psyr_2687	0.65	-0.8
3,263,056	-		Psyr_2687	0.65	+1.2
3,263,124	-		Psyr_2687	0.70	+1.0
3,263,140	-		Psyr_2687	0.71	+0.5
3,263,406	+				+0.7
3,263,407	-				-0.4
3,263,539	+				+2.6
3,263,540	-				+0.0
3,263,555	+				-0.3
3,263,555	+				-0.3
3,263,555	+				+0.5
3,263,555	+				-0.1
3,263,555	+				-0.7
3,263,555	+				-0.5
3,263,556	-				+0.1
3,263,556	-				+0.6
3,263,556	-				-0.9
3,263,556	-				-0.3
3,263,556	-				+0.6
3,263,556	-				+0.1
3,263,681	-				-0.5
3,263,682	+				+0.0
3,263,682	+				-0.7
3,263,682	+				+0.2
3,263,683	-				+1.5
3,263,683	-				-0.3
3,263,683	-				-1.8
3,263,683	-				+1.0
3,263,896	+		Psyr_2688	0.60	+0.3
3,263,896	+		Psyr_2688	0.60	-0.0
3,263,896	+		Psyr_2688	0.60	+2.3
3,263,896	+		Psyr_2688	0.60	-0.5
3,263,896	+		Psyr_2688	0.60	+0.2
3,263,897	-		Psyr_2688	0.61	-1.0
3,263,897	-		Psyr_2688	0.61	-0.1
3,263,897	-		Psyr_2688	0.61	-0.6
3,264,012	+		Psyr_2688	0.89	+1.2
3,264,013	-		Psyr_2688	0.89	-0.2
3,264,013	-		Psyr_2688	0.89	+0.2
3,264,070	+				+0.5
3,264,089	+				+0.0
3,264,090	-				-0.0
3,264,090	-				-0.5
3,264,115	+				-0.5
3,264,222	-				+0.2
3,264,323	+				-0.0
3,264,324	-				-0.6
3,264,326	-				-1.0
3,264,326	-				+0.5
3,264,326	-				+0.2
3,264,326	-				-0.0
3,264,326	-				-0.2
3,264,332	+				-1.3
3,264,333	-				+0.1
3,264,389	+				-2.0
3,264,390	-				+0.3
3,264,486	-				-0.1
3,264,487	+				-0.3
3,264,489	+				-0.9
3,264,489	+				+0.7
3,264,489	+				-0.2
3,264,490	-				+0.8
3,264,490	-				+0.1
3,264,490	-				-0.1
3,264,490	-				-1.4
3,264,491	+				-0.1
3,264,491	+				-0.5
3,264,492	-				-0.8
3,264,492	-				-1.1
3,264,494	-				-0.7
3,264,494	-				+2.6
3,264,494	-				+1.1
3,264,733	-				+0.7
3,264,752	-				+0.2
3,264,801	+				-0.4
3,264,808	-				+0.7
3,264,851	+				-1.5
3,264,852	-				+0.8
3,264,856	+				-0.6
3,264,856	+				-1.5
3,264,928	+				-1.1
3,264,953	+				+0.6
3,264,953	+				-1.1
3,264,953	+				-0.1
3,264,954	-				+1.0
3,264,954	-				-0.5
3,264,954	-				-2.7
3,265,020	+				+0.5
3,265,021	-				+0.1
3,265,021	-				-1.5