Experiment: Lactitol 10mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0304 and Echvi_0305 are separated by 232 nucleotides Echvi_0305 and Echvi_0306 are separated by 0 nucleotides
Echvi_0304: Echvi_0304 - purine nucleoside phosphorylase I, inosine and guanosine-specific, at 315,085 to 315,933
_0304
Echvi_0305: Echvi_0305 - Predicted flavoprotein, at 316,166 to 316,690
_0305
Echvi_0306: Echvi_0306 - cell division protein FtsZ, at 316,691 to 318,295
_0306
Position (kb) 316
317 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 315.205 kb on + strand, within Echvi_0304 at 315.205 kb on + strand, within Echvi_0304 at 315.206 kb on - strand, within Echvi_0304 at 315.342 kb on + strand, within Echvi_0304 at 315.363 kb on - strand, within Echvi_0304 at 315.515 kb on - strand, within Echvi_0304 at 315.515 kb on - strand, within Echvi_0304 at 315.516 kb on + strand, within Echvi_0304 at 315.516 kb on + strand, within Echvi_0304 at 315.516 kb on + strand, within Echvi_0304 at 315.517 kb on - strand, within Echvi_0304 at 315.646 kb on - strand, within Echvi_0304 at 315.650 kb on + strand, within Echvi_0304 at 315.651 kb on - strand, within Echvi_0304 at 315.659 kb on + strand, within Echvi_0304 at 315.659 kb on + strand, within Echvi_0304 at 315.659 kb on + strand, within Echvi_0304 at 315.744 kb on + strand, within Echvi_0304 at 315.774 kb on - strand, within Echvi_0304 at 315.774 kb on - strand, within Echvi_0304 at 315.807 kb on + strand, within Echvi_0304 at 315.808 kb on - strand, within Echvi_0304 at 315.808 kb on - strand, within Echvi_0304 at 315.830 kb on - strand, within Echvi_0304 at 315.830 kb on - strand, within Echvi_0304 at 315.830 kb on - strand, within Echvi_0304 at 315.830 kb on - strand, within Echvi_0304 at 315.832 kb on + strand, within Echvi_0304 at 315.833 kb on - strand, within Echvi_0304 at 315.833 kb on - strand, within Echvi_0304 at 315.876 kb on - strand at 315.876 kb on - strand at 315.906 kb on - strand at 315.999 kb on + strand at 316.107 kb on - strand at 316.151 kb on + strand at 316.156 kb on - strand at 316.161 kb on + strand at 316.161 kb on + strand at 316.170 kb on + strand at 316.180 kb on + strand at 316.193 kb on - strand at 316.280 kb on - strand, within Echvi_0305 at 316.300 kb on + strand, within Echvi_0305 at 316.300 kb on + strand, within Echvi_0305 at 316.314 kb on + strand, within Echvi_0305 at 316.314 kb on + strand, within Echvi_0305 at 316.315 kb on - strand, within Echvi_0305 at 316.349 kb on - strand, within Echvi_0305 at 316.365 kb on + strand, within Echvi_0305 at 316.366 kb on - strand, within Echvi_0305 at 316.391 kb on - strand, within Echvi_0305 at 316.391 kb on - strand, within Echvi_0305 at 316.468 kb on + strand, within Echvi_0305 at 316.469 kb on - strand, within Echvi_0305 at 316.475 kb on - strand, within Echvi_0305 at 316.548 kb on + strand, within Echvi_0305 at 316.549 kb on - strand, within Echvi_0305 at 316.613 kb on - strand, within Echvi_0305 at 316.619 kb on - strand, within Echvi_0305 at 316.621 kb on + strand, within Echvi_0305 at 316.643 kb on + strand at 316.647 kb on + strand at 316.656 kb on + strand at 316.689 kb on - strand at 316.689 kb on - strand at 316.781 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Lactitol 10mM (C) remove 315,205 + Echvi_0304 0.14 -0.1 315,205 + Echvi_0304 0.14 -0.4 315,206 - Echvi_0304 0.14 +0.6 315,342 + Echvi_0304 0.30 +1.2 315,363 - Echvi_0304 0.33 +1.7 315,515 - Echvi_0304 0.51 +0.1 315,515 - Echvi_0304 0.51 -0.8 315,516 + Echvi_0304 0.51 -1.1 315,516 + Echvi_0304 0.51 -0.8 315,516 + Echvi_0304 0.51 -1.4 315,517 - Echvi_0304 0.51 -0.3 315,646 - Echvi_0304 0.66 +0.4 315,650 + Echvi_0304 0.67 +0.4 315,651 - Echvi_0304 0.67 +2.2 315,659 + Echvi_0304 0.68 -1.5 315,659 + Echvi_0304 0.68 +0.2 315,659 + Echvi_0304 0.68 -0.7 315,744 + Echvi_0304 0.78 -0.8 315,774 - Echvi_0304 0.81 -0.6 315,774 - Echvi_0304 0.81 +1.2 315,807 + Echvi_0304 0.85 +0.6 315,808 - Echvi_0304 0.85 -0.8 315,808 - Echvi_0304 0.85 -2.1 315,830 - Echvi_0304 0.88 +1.2 315,830 - Echvi_0304 0.88 +1.2 315,830 - Echvi_0304 0.88 +0.6 315,830 - Echvi_0304 0.88 +0.3 315,832 + Echvi_0304 0.88 -0.7 315,833 - Echvi_0304 0.88 +0.7 315,833 - Echvi_0304 0.88 -1.4 315,876 - +0.7 315,876 - +1.9 315,906 - -0.1 315,999 + +0.0 316,107 - -0.9 316,151 + -0.8 316,156 - -1.5 316,161 + -0.9 316,161 + +0.2 316,170 + +0.0 316,180 + +0.6 316,193 - +1.2 316,280 - Echvi_0305 0.22 -1.8 316,300 + Echvi_0305 0.26 +0.2 316,300 + Echvi_0305 0.26 -0.6 316,314 + Echvi_0305 0.28 -0.9 316,314 + Echvi_0305 0.28 -0.3 316,315 - Echvi_0305 0.28 +2.8 316,349 - Echvi_0305 0.35 -0.8 316,365 + Echvi_0305 0.38 -2.4 316,366 - Echvi_0305 0.38 +0.4 316,391 - Echvi_0305 0.43 +1.7 316,391 - Echvi_0305 0.43 -0.6 316,468 + Echvi_0305 0.58 +3.0 316,469 - Echvi_0305 0.58 -0.3 316,475 - Echvi_0305 0.59 -1.7 316,548 + Echvi_0305 0.73 -1.0 316,549 - Echvi_0305 0.73 -0.2 316,613 - Echvi_0305 0.85 -2.2 316,619 - Echvi_0305 0.86 -0.8 316,621 + Echvi_0305 0.87 +1.2 316,643 + -0.2 316,647 + -0.4 316,656 + +1.2 316,689 - +0.3 316,689 - +0.2 316,781 - -0.8
Or see this region's nucleotide sequence