Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4404

Experiment: Lactulose 20mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Lactulose 20mM (C)
5,264,886	+		Echvi_4402	0.89	-0.5
5,264,887	-		Echvi_4402	0.89	-0.5
5,264,889	+		Echvi_4402	0.89	-2.7
5,264,895	+		Echvi_4402	0.89	-0.9
5,265,177	+				-3.0
5,265,177	+				-0.5
5,265,177	+				-1.2
5,265,177	+				-3.7
5,265,177	+				-1.9
5,265,177	+				-1.7
5,265,177	+				-4.2
5,265,178	-				-1.1
5,265,181	+				-3.3
5,265,181	+				-2.2
5,265,182	-				-3.5
5,265,182	-				-1.4
5,265,221	+				-1.6
5,265,222	-				+0.0
5,265,224	+				-1.1
5,265,224	+				-0.9
5,265,351	+				-2.1
5,265,374	+				+1.1
5,265,375	-				-0.5
5,265,375	-				-0.6
5,265,375	-				+0.1
5,265,424	-				-1.9
5,265,481	+		Echvi_4403	0.17	-1.5
5,265,527	+		Echvi_4403	0.32	-2.0
5,265,527	+		Echvi_4403	0.32	-1.8
5,265,529	+		Echvi_4403	0.33	-0.9
5,265,529	+		Echvi_4403	0.33	-2.1
5,265,529	+		Echvi_4403	0.33	-4.2
5,265,529	+		Echvi_4403	0.33	-2.7
5,265,583	-		Echvi_4403	0.51	-1.7
5,265,617	-		Echvi_4403	0.62	-0.3
5,265,628	-		Echvi_4403	0.65	+0.1
5,265,628	-		Echvi_4403	0.65	+0.3
5,265,628	-		Echvi_4403	0.65	-0.2
5,265,628	-		Echvi_4403	0.65	+0.4
5,265,628	-		Echvi_4403	0.65	+0.4
5,265,682	+		Echvi_4403	0.83	+1.1
5,265,696	+		Echvi_4403	0.88	-1.2
5,265,696	+		Echvi_4403	0.88	-2.8
5,265,706	-				+0.4
5,265,709	+				-2.0
5,265,710	-				+2.4
5,265,710	-				-1.9
5,265,741	-				+0.1
5,265,747	+				-1.1
5,265,747	+				-1.4
5,265,751	+				-0.9
5,265,769	+				-3.1
5,265,786	-				+0.6
5,265,786	-				-0.3
5,265,873	+				-2.4
5,265,874	-				+0.8
5,265,876	+				+0.2
5,265,876	+				+0.6
5,265,877	-				-0.8
5,265,891	+				-1.3
5,265,919	-				+0.3
5,265,930	+				-1.5
5,265,930	+				-0.8
5,265,931	-				+0.1
5,265,931	-				+0.1
5,265,995	+				-1.2
5,266,056	+		Echvi_4404	0.14	-1.1
5,266,057	-		Echvi_4404	0.14	-0.6
5,266,057	-		Echvi_4404	0.14	+0.1
5,266,057	-		Echvi_4404	0.14	+1.1
5,266,067	-		Echvi_4404	0.15	-1.6
5,266,071	+		Echvi_4404	0.15	+0.2
5,266,072	-		Echvi_4404	0.15	-0.0
5,266,072	-		Echvi_4404	0.15	-1.0
5,266,072	-		Echvi_4404	0.15	+1.1
5,266,092	+		Echvi_4404	0.16	+0.1
5,266,092	+		Echvi_4404	0.16	-2.5
5,266,092	+		Echvi_4404	0.16	-0.4
5,266,092	+		Echvi_4404	0.16	-2.1
5,266,092	+		Echvi_4404	0.16	-1.9
5,266,092	+		Echvi_4404	0.16	-1.2
5,266,092	+		Echvi_4404	0.16	-1.6
5,266,092	+		Echvi_4404	0.16	-0.4
5,266,093	-		Echvi_4404	0.17	+0.3
5,266,093	-		Echvi_4404	0.17	-0.1
5,266,093	-		Echvi_4404	0.17	-0.3
5,266,093	-		Echvi_4404	0.17	+0.2
5,266,093	-		Echvi_4404	0.17	+0.4
5,266,093	-		Echvi_4404	0.17	-2.3
5,266,093	-		Echvi_4404	0.17	-0.4
5,266,094	+		Echvi_4404	0.17	+0.2
5,266,094	+		Echvi_4404	0.17	-2.4
5,266,094	+		Echvi_4404	0.17	-0.3
5,266,095	-		Echvi_4404	0.17	-1.7
5,266,095	-		Echvi_4404	0.17	-0.8
5,266,129	-		Echvi_4404	0.19	-0.1
5,266,158	-		Echvi_4404	0.21	+1.0
5,266,172	+		Echvi_4404	0.23	-1.9
5,266,173	-		Echvi_4404	0.23	-0.2
5,266,173	-		Echvi_4404	0.23	-0.8
5,266,204	+		Echvi_4404	0.25	-0.9
5,266,289	+		Echvi_4404	0.31	+1.1
5,266,289	+		Echvi_4404	0.31	-0.4
5,266,342	+				-2.4
5,266,342	+		Echvi_4404	0.35	-1.7
5,266,342	+		Echvi_4404	0.35	-4.3
5,266,345	-		Echvi_4404	0.36	-2.0
5,266,345	-		Echvi_4404	0.36	+0.7
5,266,351	-		Echvi_4404	0.36	+1.1
5,266,379	+		Echvi_4404	0.38	+1.2
5,266,427	-		Echvi_4404	0.42	-0.6
5,266,427	-		Echvi_4404	0.42	-0.3
5,266,469	+		Echvi_4404	0.45	-2.9
5,266,560	+		Echvi_4404	0.52	-0.2
5,266,593	+		Echvi_4404	0.55	-0.4
5,266,594	-		Echvi_4404	0.55	-1.0
5,266,594	-		Echvi_4404	0.55	-0.4
5,266,627	+		Echvi_4404	0.57	-0.4
5,266,627	+		Echvi_4404	0.57	-1.0
5,266,628	-		Echvi_4404	0.57	+0.0
5,266,628	-		Echvi_4404	0.57	-1.6
5,266,628	-		Echvi_4404	0.57	-0.1
5,266,628	-		Echvi_4404	0.57	-0.8
5,266,629	+		Echvi_4404	0.57	-0.7
5,266,629	+		Echvi_4404	0.57	-2.0
5,266,629	+		Echvi_4404	0.57	-3.0
5,266,629	+		Echvi_4404	0.57	-2.1
5,266,630	-		Echvi_4404	0.57	+0.1
5,266,630	-		Echvi_4404	0.57	+1.2
5,266,631	+		Echvi_4404	0.57	-1.0
5,266,631	+		Echvi_4404	0.57	-0.7
5,266,631	+		Echvi_4404	0.57	-1.0
5,266,632	-		Echvi_4404	0.57	-0.6
5,266,632	-		Echvi_4404	0.57	+0.5
5,266,727	+		Echvi_4404	0.65	-2.1
5,266,746	-		Echvi_4404	0.66	+0.1
5,266,784	+		Echvi_4404	0.69	-2.0
5,266,848	-		Echvi_4404	0.74	-2.2
5,266,848	-		Echvi_4404	0.74	-2.2
5,266,854	+		Echvi_4404	0.74	-1.3
5,266,855	-		Echvi_4404	0.74	+1.0
5,266,900	-		Echvi_4404	0.78	+0.5
5,266,949	-		Echvi_4404	0.82	-0.3
5,267,016	+		Echvi_4404	0.87	-0.7
5,267,053	-		Echvi_4404	0.89	-0.4
5,267,053	-		Echvi_4404	0.89	+0.4
5,267,126	+				-1.7
5,267,127	-				-0.4
5,267,127	-				-0.1
5,267,127	-				+0.1
5,267,175	-				+0.4
5,267,175	-				+0.4
5,267,175	-				-1.2
5,267,205	-				-1.1
5,267,275	+				-3.3
5,267,284	+				-1.9
5,267,285	-				-0.7
5,267,285	-				-2.4
5,267,285	-				-1.0
5,267,285	-				-0.8
5,267,287	+				-0.1
5,267,287	+				-1.2
5,267,287	+				-0.4
5,267,287	+				+0.5
5,267,288	-				+1.5
5,267,288	-				-2.6
5,267,288	-				+0.3
5,267,288	-				+0.5
5,267,288	-				-0.6
5,267,288	-				+0.1
5,267,288	-				-1.0
5,267,288	-				-0.7
5,267,293	+				-0.4
5,267,293	+				-0.6
5,267,293	+				-1.2
5,267,293	+				-1.2
5,267,294	-				+0.0
5,267,294	-				-0.9
5,267,294	-				-3.4
5,267,294	-				-0.5
5,267,294	-				+0.1
5,267,294	-				-0.4
5,267,294	-				-0.7
5,267,294	-				-0.0
5,267,294	-				+0.2
5,267,294	-				+0.5
5,267,295	+				-0.1
5,267,296	-				+0.4
5,267,296	-				-1.1
5,267,308	+				-2.0
5,267,308	+				+0.4
5,267,309	-				-0.7
5,267,332	+				-1.4
5,267,333	-				+0.5
5,267,398	+				-0.2
5,267,403	-				+0.2
5,267,425	-				+0.0
5,267,446	+				-1.2
5,267,447	-				+0.7
5,267,447	-				-1.1
5,267,449	+				-0.8
5,267,449	+				-1.7
5,267,453	+				-1.2
5,267,477	-				-0.7
5,267,524	+		Echvi_4405	0.17	+0.7
5,267,547	+		Echvi_4405	0.21	-1.0
5,267,559	-		Echvi_4405	0.24	+1.5
5,267,575	+		Echvi_4405	0.26	-1.0
5,267,575	+		Echvi_4405	0.26	-1.6
5,267,613	+		Echvi_4405	0.34	-0.9
5,267,691	+		Echvi_4405	0.48	+0.6
5,267,692	-		Echvi_4405	0.48	+0.2
5,267,692	-		Echvi_4405	0.48	+2.1
5,267,692	-		Echvi_4405	0.48	-1.7
5,267,705	-		Echvi_4405	0.51	+1.6
5,267,785	-		Echvi_4405	0.65	+0.2
5,267,807	-		Echvi_4405	0.69	-0.7
5,267,819	+		Echvi_4405	0.72	-2.4
5,267,820	-		Echvi_4405	0.72	-0.5
5,267,869	+		Echvi_4405	0.81	-1.1
5,267,927	-				-1.8
5,267,992	+				+1.4
5,267,992	+				-0.8
5,267,992	+				-2.0
5,267,993	-				+0.1
5,268,047	+				-0.7
5,268,060	+				+0.1
5,268,188	+				+0.2
5,268,188	+				+0.2
5,268,190	+				+0.3