Strain Fitness in Escherichia coli BW25113 around b2552

Experiment: 3-methyl-3-butenol 0.625 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	3-methyl-3-butenol 0.625 vol%
2,683,781	+				+0.4
2,683,789	-				+0.1
2,683,874	-				+0.7
2,684,075	+	hmp	b2552	0.18	-0.5
2,684,075	+	hmp	b2552	0.18	+0.2
2,684,076	-	hmp	b2552	0.18	+0.2
2,684,076	-	hmp	b2552	0.18	+0.7
2,684,113	-	hmp	b2552	0.21	+0.2
2,684,136	+	hmp	b2552	0.23	-0.1
2,684,136	+	hmp	b2552	0.23	+1.2
2,684,146	-	hmp	b2552	0.24	+0.1
2,684,146	-	hmp	b2552	0.24	+0.1
2,684,146	-	hmp	b2552	0.24	-0.5
2,684,146	-	hmp	b2552	0.24	+0.3
2,684,160	-	hmp	b2552	0.25	-2.1
2,684,160	-	hmp	b2552	0.25	-0.3
2,684,191	-	hmp	b2552	0.28	+0.5
2,684,191	-	hmp	b2552	0.28	+0.3
2,684,207	+	hmp	b2552	0.29	-0.3
2,684,222	+	hmp	b2552	0.31	+0.0
2,684,222	+	hmp	b2552	0.31	+0.7
2,684,330	+	hmp	b2552	0.40	-0.9
2,684,338	-	hmp	b2552	0.40	+0.1
2,684,338	-	hmp	b2552	0.40	+0.6
2,684,405	-	hmp	b2552	0.46	-0.4
2,684,476	-	hmp	b2552	0.52	+0.9
2,684,721	+	hmp	b2552	0.73	+0.5
2,684,789	+	hmp	b2552	0.78	+0.0
2,684,789	+	hmp	b2552	0.78	+0.4
2,684,827	-	hmp	b2552	0.81	+0.6
2,684,830	-	hmp	b2552	0.82	-0.0
2,684,970	+				-1.3
2,684,970	+				+0.1
2,685,032	+				+1.0
2,685,047	-				+0.1
2,685,079	+				-0.1
2,685,107	+				-0.5
2,685,107	+				+0.5
2,685,120	+				-0.1
2,685,120	+				+1.0
2,685,223	-	glnB	b2553	0.39	-0.9
2,685,273	+	glnB	b2553	0.53	-0.1
2,685,273	+	glnB	b2553	0.53	+0.0
2,685,281	-	glnB	b2553	0.56	-0.2
2,685,288	+	glnB	b2553	0.58	-0.2
2,685,311	-	glnB	b2553	0.65	+0.4
2,685,311	-	glnB	b2553	0.65	+0.1
2,685,311	-	glnB	b2553	0.65	-0.7
2,685,311	-	glnB	b2553	0.65	-0.1
2,685,371	-	glnB	b2553	0.82	-1.1
2,685,488	+				+0.4
2,685,488	+				+0.3
2,685,525	-				-0.6
2,685,682	+	yfhA	b2554	0.14	+0.2
2,685,703	+	yfhA	b2554	0.16	+0.5
2,685,703	+	yfhA	b2554	0.16	+1.2
2,685,725	+	yfhA	b2554	0.18	+0.8
2,685,821	-	yfhA	b2554	0.25	-1.1
2,685,821	-	yfhA	b2554	0.25	-0.4
2,685,863	-	yfhA	b2554	0.28	+0.5
2,685,885	-	yfhA	b2554	0.30	-1.6
2,685,885	-	yfhA	b2554	0.30	-0.7
2,685,897	-	yfhA	b2554	0.30	+1.1