Strain Fitness in Escherichia coli BW25113 around b2296
Experiment: 3-methyl-3-butenol 0.625 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 3-methyl-3-butenol 0.625 vol% |
---|---|---|---|---|---|
remove | |||||
2,410,508 | + | b2294 | b2294 | 0.78 | -0.2 |
2,410,538 | - | b2294 | b2294 | 0.84 | -0.1 |
2,410,538 | - | b2294 | b2294 | 0.84 | +0.8 |
2,410,550 | + | b2294 | b2294 | 0.86 | +1.3 |
2,410,561 | + | b2294 | b2294 | 0.89 | -1.2 |
2,410,567 | + | -0.2 | |||
2,410,567 | + | -0.1 | |||
2,410,618 | + | +0.5 | |||
2,410,623 | + | -0.3 | |||
2,410,636 | - | -0.5 | |||
2,410,636 | - | -0.4 | |||
2,410,673 | + | +0.5 | |||
2,410,673 | + | +0.7 | |||
2,410,726 | - | +0.1 | |||
2,410,765 | - | yfbV | b2295 | 0.14 | -1.0 |
2,410,808 | + | yfbV | b2295 | 0.24 | +1.0 |
2,410,808 | + | yfbV | b2295 | 0.24 | -0.8 |
2,410,811 | - | yfbV | b2295 | 0.25 | +0.1 |
2,410,858 | + | yfbV | b2295 | 0.35 | -0.9 |
2,410,864 | + | yfbV | b2295 | 0.36 | -0.7 |
2,410,866 | - | yfbV | b2295 | 0.37 | +0.0 |
2,410,886 | + | yfbV | b2295 | 0.41 | +0.4 |
2,410,934 | - | yfbV | b2295 | 0.52 | -0.6 |
2,410,946 | - | yfbV | b2295 | 0.54 | -0.1 |
2,410,948 | + | yfbV | b2295 | 0.55 | -0.1 |
2,411,001 | + | yfbV | b2295 | 0.66 | -1.8 |
2,411,113 | - | +0.5 | |||
2,411,138 | - | -0.0 | |||
2,411,174 | - | +0.2 | |||
2,411,285 | - | -0.2 | |||
2,411,290 | + | +0.2 | |||
2,411,317 | + | +0.6 | |||
2,411,398 | + | +1.4 | |||
2,411,398 | + | +0.5 |
Or see this region's nucleotide sequence