Strain Fitness in Escherichia coli BW25113 around b1478
Experiment: 3-methyl-3-butenol 0.625 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 3-methyl-3-butenol 0.625 vol% |
---|---|---|---|---|---|
remove | |||||
1,550,056 | - | +0.1 | |||
1,550,189 | - | +0.3 | |||
1,550,189 | - | -1.0 | |||
1,550,209 | - | +0.2 | |||
1,550,806 | + | -0.2 | |||
1,550,833 | - | -0.2 | |||
1,551,011 | + | adhP | b1478 | 0.16 | +0.4 |
1,551,036 | - | adhP | b1478 | 0.18 | -0.5 |
1,551,421 | + | adhP | b1478 | 0.56 | -0.3 |
1,551,752 | + | adhP | b1478 | 0.89 | +0.3 |
1,551,859 | + | -0.2 | |||
1,551,859 | + | +0.5 | |||
1,551,871 | - | -0.0 | |||
1,552,077 | + | +1.4 | |||
1,552,077 | + | +0.4 | |||
1,552,093 | + | -0.2 | |||
1,552,254 | - | sfcA | b1479 | 0.15 | +0.2 |
1,552,274 | - | sfcA | b1479 | 0.16 | -0.1 |
1,552,501 | + | sfcA | b1479 | 0.30 | +0.5 |
1,552,509 | - | sfcA | b1479 | 0.30 | +0.2 |
1,552,509 | - | sfcA | b1479 | 0.30 | +0.8 |
1,552,638 | - | sfcA | b1479 | 0.38 | -0.7 |
1,552,638 | - | sfcA | b1479 | 0.38 | +0.4 |
Or see this region's nucleotide sequence