Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_2352

Experiment: KB with Rotenone 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Rotenone 0.25 mg/ml
2,726,999	-				-0.2
2,727,038	+				+1.4
2,727,054	+				+0.5
2,727,055	-				-1.0
2,727,064	+				+2.2
2,727,220	-		Psyr_2351	0.25	+0.9
2,727,222	+		Psyr_2351	0.25	+0.0
2,727,222	+		Psyr_2351	0.25	-1.6
2,727,222	+		Psyr_2351	0.25	-0.0
2,727,223	-		Psyr_2351	0.25	-0.6
2,727,223	-		Psyr_2351	0.25	+1.1
2,727,258	+		Psyr_2351	0.31	-0.9
2,727,414	+		Psyr_2351	0.58	+0.0
2,727,631	+				+0.8
2,727,632	-				+0.0
2,727,632	-				-0.2
2,727,632	-				-0.2
2,727,927	-				+0.6
2,728,003	+		Psyr_2352	0.10	+1.5
2,728,046	-		Psyr_2352	0.19	-1.9
2,728,075	+		Psyr_2352	0.24	-1.6
2,728,075	+		Psyr_2352	0.24	-0.1
2,728,076	-		Psyr_2352	0.24	-1.4
2,728,378	+		Psyr_2352	0.81	-0.2
2,728,378	+		Psyr_2352	0.81	-0.8
2,728,378	+		Psyr_2352	0.81	-3.4
2,728,378	+		Psyr_2352	0.81	-0.0
2,728,378	+		Psyr_2352	0.81	+0.1
2,728,378	+		Psyr_2352	0.81	-0.4
2,728,379	-		Psyr_2352	0.82	-0.3
2,728,379	-		Psyr_2352	0.82	-0.1
2,728,379	-		Psyr_2352	0.82	+0.2
2,728,379	-		Psyr_2352	0.82	-0.4
2,728,530	+				-0.2
2,728,530	+				+0.3
2,728,530	+				-0.1
2,728,530	+				-0.4
2,728,530	+				+0.9
2,728,531	-				-0.5
2,728,565	+				-0.6
2,728,565	+				-0.4
2,728,565	+				-0.5
2,728,566	-				-0.4
2,728,570	+				-0.3
2,728,571	-				-1.3
2,728,574	+				-0.2
2,728,920	-		Psyr_2353	0.27	+0.8
2,728,920	-		Psyr_2353	0.27	-1.4
2,728,935	-		Psyr_2353	0.28	-0.7
2,728,987	+		Psyr_2353	0.32	-0.7
2,728,987	+		Psyr_2353	0.32	-1.0
2,728,987	+		Psyr_2353	0.32	+0.8
2,728,987	+		Psyr_2353	0.32	+0.1
2,728,988	-		Psyr_2353	0.32	-0.7
2,728,988	-		Psyr_2353	0.32	+1.0
2,728,988	-		Psyr_2353	0.32	-0.4
2,728,988	-		Psyr_2353	0.32	+2.0
2,728,991	+		Psyr_2353	0.33	+0.7
2,728,991	+		Psyr_2353	0.33	+1.7
2,728,992	-		Psyr_2353	0.33	-2.6
2,728,992	-		Psyr_2353	0.33	-0.4
2,728,992	-		Psyr_2353	0.33	-1.0
2,728,992	-		Psyr_2353	0.33	-1.3
2,728,992	-		Psyr_2353	0.33	-0.0
2,729,287	+		Psyr_2353	0.57	-0.3
2,729,288	-		Psyr_2353	0.57	-2.2
2,729,335	-		Psyr_2353	0.61	-0.4
2,729,362	+		Psyr_2353	0.63	+1.0
2,729,362	+		Psyr_2353	0.63	+0.1
2,729,362	+		Psyr_2353	0.63	+0.7
2,729,362	+		Psyr_2353	0.63	+0.0
2,729,362	+		Psyr_2353	0.63	-0.2
2,729,362	+		Psyr_2353	0.63	+0.2
2,729,363	-		Psyr_2353	0.63	-1.9
2,729,363	-		Psyr_2353	0.63	-1.3
2,729,363	-		Psyr_2353	0.63	-0.7
2,729,363	-		Psyr_2353	0.63	-0.3
2,729,408	+		Psyr_2353	0.67	+0.4
2,729,408	+		Psyr_2353	0.67	+0.1
2,729,409	-		Psyr_2353	0.67	-0.1