Experiment: KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt
PfGW456L13_3989 - FIG00964275: hypothetical protein, at 4,475,130 to 4,475,402
_3989
Position (kb) 4475
4476 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 4474.205 kb on - strand at 4474.224 kb on - strand at 4474.278 kb on - strand at 4474.280 kb on - strand at 4474.299 kb on - strand at 4474.413 kb on + strand at 4474.413 kb on + strand at 4474.414 kb on - strand at 4474.414 kb on - strand at 4474.414 kb on - strand at 4474.414 kb on - strand at 4474.414 kb on - strand at 4474.488 kb on + strand at 4474.489 kb on - strand at 4474.489 kb on - strand at 4474.516 kb on + strand at 4474.517 kb on - strand at 4474.592 kb on - strand at 4474.627 kb on - strand at 4474.670 kb on + strand at 4474.670 kb on + strand at 4474.670 kb on + strand at 4474.670 kb on + strand at 4474.682 kb on - strand at 4474.688 kb on + strand at 4474.688 kb on + strand at 4474.689 kb on - strand at 4474.689 kb on - strand at 4474.701 kb on + strand at 4474.702 kb on - strand at 4474.702 kb on - strand at 4474.721 kb on + strand at 4474.721 kb on + strand at 4474.721 kb on + strand at 4474.750 kb on + strand at 4474.771 kb on + strand at 4474.772 kb on - strand at 4474.786 kb on + strand at 4474.786 kb on + strand at 4474.819 kb on - strand at 4474.821 kb on - strand at 4474.848 kb on - strand at 4474.857 kb on + strand at 4474.857 kb on + strand at 4474.983 kb on + strand at 4475.024 kb on + strand at 4475.025 kb on - strand at 4475.063 kb on - strand at 4475.219 kb on - strand, within PfGW456L13_3989 at 4475.317 kb on + strand, within PfGW456L13_3989 at 4475.328 kb on + strand, within PfGW456L13_3989 at 4475.329 kb on - strand, within PfGW456L13_3989 at 4475.431 kb on + strand at 4475.431 kb on + strand at 4475.477 kb on + strand at 4475.477 kb on + strand at 4475.477 kb on + strand at 4475.477 kb on + strand at 4475.478 kb on - strand at 4475.538 kb on + strand at 4475.539 kb on - strand at 4475.600 kb on + strand at 4475.611 kb on - strand at 4475.611 kb on - strand at 4475.676 kb on - strand at 4475.680 kb on - strand at 4475.680 kb on - strand at 4475.680 kb on - strand at 4475.680 kb on - strand at 4475.745 kb on + strand at 4475.805 kb on + strand at 4475.806 kb on - strand at 4475.859 kb on - strand at 4475.956 kb on + strand at 4476.016 kb on - strand at 4476.073 kb on + strand at 4476.076 kb on - strand at 4476.076 kb on - strand at 4476.107 kb on - strand at 4476.107 kb on - strand at 4476.109 kb on - strand at 4476.109 kb on - strand at 4476.135 kb on - strand at 4476.216 kb on - strand at 4476.271 kb on + strand at 4476.277 kb on + strand at 4476.277 kb on + strand at 4476.278 kb on - strand at 4476.278 kb on - strand at 4476.310 kb on - strand at 4476.311 kb on + strand at 4476.312 kb on - strand at 4476.346 kb on - strand at 4476.383 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x remove 4,474,205 - -0.5 4,474,224 - -2.6 4,474,278 - -1.2 4,474,280 - -0.6 4,474,299 - +0.0 4,474,413 + -1.8 4,474,413 + -1.6 4,474,414 - +1.5 4,474,414 - +1.3 4,474,414 - +0.5 4,474,414 - +0.6 4,474,414 - +0.5 4,474,488 + -2.3 4,474,489 - +1.5 4,474,489 - +0.1 4,474,516 + -0.6 4,474,517 - +0.0 4,474,592 - -1.3 4,474,627 - +1.3 4,474,670 + +2.0 4,474,670 + +2.1 4,474,670 + +1.7 4,474,670 + +1.5 4,474,682 - +0.8 4,474,688 + +2.3 4,474,688 + +0.0 4,474,689 - +0.3 4,474,689 - +0.8 4,474,701 + +0.6 4,474,702 - +0.8 4,474,702 - +0.6 4,474,721 + +2.2 4,474,721 + +1.7 4,474,721 + +2.6 4,474,750 + +1.4 4,474,771 + +2.3 4,474,772 - +1.1 4,474,786 + +2.7 4,474,786 + +2.0 4,474,819 - +0.3 4,474,821 - -0.3 4,474,848 - +0.0 4,474,857 + +2.8 4,474,857 + +2.3 4,474,983 + +2.1 4,475,024 + +1.6 4,475,025 - -1.0 4,475,063 - +0.0 4,475,219 - PfGW456L13_3989 0.33 +0.5 4,475,317 + PfGW456L13_3989 0.68 +1.9 4,475,328 + PfGW456L13_3989 0.73 +2.0 4,475,329 - PfGW456L13_3989 0.73 -2.2 4,475,431 + -0.3 4,475,431 + -1.0 4,475,477 + +1.6 4,475,477 + +2.4 4,475,477 + -2.3 4,475,477 + +1.0 4,475,478 - +0.3 4,475,538 + -3.2 4,475,539 - -0.2 4,475,600 + +0.0 4,475,611 - -2.2 4,475,611 - +1.8 4,475,676 - +1.0 4,475,680 - -1.0 4,475,680 - +1.2 4,475,680 - +0.5 4,475,680 - +0.2 4,475,745 + -1.0 4,475,805 + +0.0 4,475,806 - +0.7 4,475,859 - +1.2 4,475,956 + -2.8 4,476,016 - +0.8 4,476,073 + -0.6 4,476,076 - +0.4 4,476,076 - +0.0 4,476,107 - +0.0 4,476,107 - +0.4 4,476,109 - +0.9 4,476,109 - +0.3 4,476,135 - +1.4 4,476,216 - +1.8 4,476,271 + +1.1 4,476,277 + +2.2 4,476,277 + -1.1 4,476,278 - +0.1 4,476,278 - +0.5 4,476,310 - +1.9 4,476,311 + +0.6 4,476,312 - +0.5 4,476,346 - +1.7 4,476,383 + +1.6
Or see this region's nucleotide sequence