Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_2316

Experiment: KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x
2,539,510	+				+1.0
2,539,511	-				-0.4
2,539,546	+				-0.0
2,539,546	+				-0.0
2,539,547	-				+1.4
2,539,547	-				+1.8
2,539,565	+				+2.8
2,539,565	+				+0.7
2,539,798	-		PfGW456L13_2315	0.26	+0.1
2,539,844	+		PfGW456L13_2315	0.34	+0.7
2,539,845	-		PfGW456L13_2315	0.34	-0.4
2,539,856	+		PfGW456L13_2315	0.36	+0.9
2,539,856	+		PfGW456L13_2315	0.36	+0.5
2,539,857	-		PfGW456L13_2315	0.36	+0.1
2,539,857	-		PfGW456L13_2315	0.36	+0.4
2,539,871	+		PfGW456L13_2315	0.38	+1.2
2,539,872	-		PfGW456L13_2315	0.38	+0.1
2,539,872	-		PfGW456L13_2315	0.38	-0.3
2,539,872	-		PfGW456L13_2315	0.38	+1.3
2,539,872	-		PfGW456L13_2315	0.38	-2.6
2,539,872	-		PfGW456L13_2315	0.38	+0.6
2,539,886	+		PfGW456L13_2315	0.40	+0.4
2,539,886	+		PfGW456L13_2315	0.40	-2.0
2,539,887	-		PfGW456L13_2315	0.41	-1.2
2,539,887	-		PfGW456L13_2315	0.41	+0.1
2,539,967	+		PfGW456L13_2315	0.54	-0.0
2,539,967	+		PfGW456L13_2315	0.54	+0.2
2,539,967	+		PfGW456L13_2315	0.54	+1.0
2,539,968	-		PfGW456L13_2315	0.54	-1.6
2,539,968	-		PfGW456L13_2315	0.54	-0.2
2,539,968	-		PfGW456L13_2315	0.54	-0.0
2,539,968	-		PfGW456L13_2315	0.54	+0.0
2,540,029	+		PfGW456L13_2315	0.64	-0.8
2,540,029	+		PfGW456L13_2315	0.64	-0.1
2,540,030	-		PfGW456L13_2315	0.64	-0.8
2,540,039	+		PfGW456L13_2315	0.65	+0.1
2,540,039	+		PfGW456L13_2315	0.65	+0.1
2,540,040	-		PfGW456L13_2315	0.66	-0.0
2,540,040	-		PfGW456L13_2315	0.66	-0.0
2,540,040	-		PfGW456L13_2315	0.66	-2.2
2,540,040	-		PfGW456L13_2315	0.66	-0.8
2,540,040	-		PfGW456L13_2315	0.66	-0.6
2,540,040	-		PfGW456L13_2315	0.66	-0.3
2,540,040	-		PfGW456L13_2315	0.66	-0.6
2,540,040	-		PfGW456L13_2315	0.66	+1.9
2,540,057	+		PfGW456L13_2315	0.68	+0.5
2,540,057	+		PfGW456L13_2315	0.68	+1.6
2,540,057	+		PfGW456L13_2315	0.68	+0.3
2,540,058	-		PfGW456L13_2315	0.68	-1.3
2,540,232	+				-1.3
2,540,246	-				+0.1
2,540,284	+				+0.6
2,540,284	+				-0.3
2,540,285	-				+0.7
2,540,285	-				-0.0
2,540,310	-				-1.3
2,540,319	+				-0.5
2,540,320	-				-1.6
2,540,328	+				+1.2
2,540,328	+				-1.4
2,540,328	+				+1.1
2,540,328	+				-2.0
2,540,329	-				-0.4
2,540,329	-				+0.7
2,540,357	+				-0.3
2,540,357	+				-0.6
2,540,357	+				+0.2
2,540,358	-				+1.0
2,540,358	-				+0.4
2,540,363	+				-1.4
2,540,457	+				-0.4
2,540,463	+				+2.6
2,540,463	+				-0.0
2,540,463	+				+1.4
2,540,476	+				-0.8
2,540,476	+				+0.2
2,540,476	+				+0.0
2,540,477	-				-0.8
2,540,477	-				+0.3
2,540,477	-				+0.4
2,540,485	+				-0.3
2,540,486	-				+0.4
2,540,748	+		PfGW456L13_2316	0.25	+1.6
2,540,749	-		PfGW456L13_2316	0.25	-0.3
2,540,827	+		PfGW456L13_2316	0.32	-0.1
2,540,827	+		PfGW456L13_2316	0.32	+1.6
2,540,827	+		PfGW456L13_2316	0.32	+0.8
2,540,828	-		PfGW456L13_2316	0.32	+0.6
2,540,828	-		PfGW456L13_2316	0.32	-0.0
2,540,828	-		PfGW456L13_2316	0.32	-1.2
2,540,828	-		PfGW456L13_2316	0.32	-0.4
2,541,083	-		PfGW456L13_2316	0.54	+0.5
2,541,109	+		PfGW456L13_2316	0.56	-1.1
2,541,109	+		PfGW456L13_2316	0.56	+2.0
2,541,109	+		PfGW456L13_2316	0.56	+0.9
2,541,110	-		PfGW456L13_2316	0.56	+0.8
2,541,110	-		PfGW456L13_2316	0.56	+0.1
2,541,470	+		PfGW456L13_2316	0.87	+1.2
2,541,470	+		PfGW456L13_2316	0.87	+1.2
2,541,470	+		PfGW456L13_2316	0.87	-0.4
2,541,470	+		PfGW456L13_2316	0.87	+0.6
2,541,470	+		PfGW456L13_2316	0.87	+0.4
2,541,470	+		PfGW456L13_2316	0.87	-0.2
2,541,471	-		PfGW456L13_2316	0.87	-0.2
2,541,471	-		PfGW456L13_2316	0.87	-1.2
2,541,471	-				+0.6
2,541,471	-		PfGW456L13_2316	0.87	+2.6
2,541,471	-		PfGW456L13_2316	0.87	-1.4
2,541,471	-		PfGW456L13_2316	0.87	-0.2
2,541,471	-		PfGW456L13_2316	0.87	-0.8
2,541,471	-		PfGW456L13_2316	0.87	-0.0
2,541,613	+				+0.6
2,541,614	-				-0.0
2,541,652	+				+1.2
2,541,652	+				+0.2
2,541,653	-				+0.4
2,541,653	-				+0.4
2,541,653	-				+1.3
2,541,653	-				-0.0
2,541,686	+				-0.7
2,541,686	+				-1.8
2,541,687	-				-1.2
2,541,804	+				+1.1
2,541,805	-				+1.4
2,541,805	-				-2.0
2,541,805	-				+0.5
2,542,177	-		PfGW456L13_2317	0.27	-0.3
2,542,455	+		PfGW456L13_2317	0.43	-0.2
2,542,456	-		PfGW456L13_2317	0.43	-0.5
2,542,469	+		PfGW456L13_2317	0.44	-1.0