Experiment: KB with Flavone 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4502 and Psyr_4503 overlap by 4 nucleotides Psyr_4503 and Psyr_4504 overlap by 4 nucleotides Psyr_4504 and Psyr_4505 overlap by 4 nucleotides
Psyr_4502: Psyr_4502 - carbohydrate ABC transporter substrate-binding protein, CUT1 family, at 5,366,138 to 5,367,457
_4502
Psyr_4503: Psyr_4503 - carbohydrate ABC transporter membrane protein 1, CUT1 family, at 5,367,454 to 5,368,347
_4503
Psyr_4504: Psyr_4504 - carbohydrate ABC transporter membrane protein 2, CUT1 family, at 5,368,344 to 5,369,237
_4504
Psyr_4505: Psyr_4505 - carbohydrate ABC transporter ATP-binding protein, CUT1 family, at 5,369,234 to 5,370,340
_4505
Position (kb) 5367
5368
5369 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5366.481 kb on - strand, within Psyr_4502 at 5366.491 kb on + strand, within Psyr_4502 at 5366.491 kb on + strand, within Psyr_4502 at 5366.491 kb on + strand, within Psyr_4502 at 5366.516 kb on + strand, within Psyr_4502 at 5366.516 kb on + strand, within Psyr_4502 at 5366.519 kb on + strand, within Psyr_4502 at 5366.520 kb on - strand, within Psyr_4502 at 5366.579 kb on + strand, within Psyr_4502 at 5366.580 kb on - strand, within Psyr_4502 at 5366.580 kb on - strand, within Psyr_4502 at 5366.581 kb on + strand, within Psyr_4502 at 5366.581 kb on + strand, within Psyr_4502 at 5366.582 kb on - strand, within Psyr_4502 at 5366.582 kb on - strand, within Psyr_4502 at 5366.582 kb on - strand, within Psyr_4502 at 5366.582 kb on - strand, within Psyr_4502 at 5366.582 kb on - strand, within Psyr_4502 at 5366.952 kb on + strand, within Psyr_4502 at 5366.952 kb on + strand, within Psyr_4502 at 5366.953 kb on - strand, within Psyr_4502 at 5366.953 kb on - strand, within Psyr_4502 at 5366.953 kb on - strand, within Psyr_4502 at 5366.953 kb on - strand, within Psyr_4502 at 5366.953 kb on - strand, within Psyr_4502 at 5366.953 kb on - strand, within Psyr_4502 at 5366.953 kb on - strand, within Psyr_4502 at 5366.953 kb on - strand, within Psyr_4502 at 5367.133 kb on - strand, within Psyr_4502 at 5367.283 kb on + strand, within Psyr_4502 at 5367.625 kb on + strand, within Psyr_4503 at 5367.626 kb on - strand, within Psyr_4503 at 5367.943 kb on + strand, within Psyr_4503 at 5367.944 kb on - strand, within Psyr_4503 at 5368.012 kb on + strand, within Psyr_4503 at 5368.013 kb on - strand, within Psyr_4503 at 5368.067 kb on + strand, within Psyr_4503 at 5368.067 kb on + strand, within Psyr_4503 at 5368.067 kb on + strand, within Psyr_4503 at 5368.067 kb on + strand, within Psyr_4503 at 5368.067 kb on + strand, within Psyr_4503 at 5368.067 kb on + strand, within Psyr_4503 at 5368.067 kb on + strand, within Psyr_4503 at 5368.067 kb on + strand, within Psyr_4503 at 5368.067 kb on + strand, within Psyr_4503 at 5368.068 kb on - strand, within Psyr_4503 at 5368.068 kb on - strand, within Psyr_4503 at 5368.068 kb on - strand, within Psyr_4503 at 5368.068 kb on - strand, within Psyr_4503 at 5368.068 kb on - strand, within Psyr_4503 at 5368.068 kb on - strand, within Psyr_4503 at 5368.068 kb on - strand, within Psyr_4503 at 5368.068 kb on - strand, within Psyr_4503 at 5368.068 kb on - strand, within Psyr_4503 at 5368.068 kb on - strand, within Psyr_4503 at 5368.068 kb on - strand, within Psyr_4503 at 5368.090 kb on + strand, within Psyr_4503 at 5368.090 kb on + strand, within Psyr_4503 at 5368.091 kb on - strand, within Psyr_4503 at 5368.182 kb on + strand, within Psyr_4503 at 5368.185 kb on + strand, within Psyr_4503 at 5368.185 kb on + strand, within Psyr_4503 at 5368.185 kb on + strand, within Psyr_4503 at 5368.185 kb on + strand, within Psyr_4503 at 5368.201 kb on + strand, within Psyr_4503 at 5368.202 kb on - strand, within Psyr_4503 at 5368.210 kb on + strand, within Psyr_4503 at 5368.380 kb on + strand at 5368.380 kb on + strand at 5368.381 kb on - strand at 5368.425 kb on + strand at 5368.425 kb on + strand at 5368.425 kb on + strand at 5368.425 kb on + strand at 5368.425 kb on + strand at 5368.425 kb on + strand at 5368.425 kb on + strand at 5368.425 kb on + strand at 5368.425 kb on + strand at 5368.426 kb on - strand at 5368.426 kb on - strand at 5368.426 kb on - strand at 5368.426 kb on - strand at 5368.426 kb on - strand at 5368.426 kb on - strand at 5368.426 kb on - strand at 5368.426 kb on - strand at 5368.426 kb on - strand at 5368.426 kb on - strand at 5368.426 kb on - strand at 5368.426 kb on - strand at 5368.426 kb on - strand at 5368.429 kb on + strand at 5368.430 kb on - strand at 5368.430 kb on - strand at 5368.430 kb on - strand at 5368.636 kb on - strand, within Psyr_4504 at 5368.636 kb on - strand, within Psyr_4504 at 5368.705 kb on + strand, within Psyr_4504 at 5368.705 kb on + strand, within Psyr_4504 at 5368.706 kb on - strand, within Psyr_4504 at 5368.722 kb on + strand, within Psyr_4504 at 5368.722 kb on + strand, within Psyr_4504 at 5368.722 kb on + strand, within Psyr_4504 at 5368.722 kb on + strand, within Psyr_4504 at 5368.722 kb on + strand, within Psyr_4504 at 5368.722 kb on + strand, within Psyr_4504 at 5368.722 kb on + strand, within Psyr_4504 at 5368.722 kb on + strand, within Psyr_4504 at 5368.722 kb on + strand, within Psyr_4504 at 5368.723 kb on - strand, within Psyr_4504 at 5368.723 kb on - strand, within Psyr_4504 at 5368.723 kb on - strand, within Psyr_4504 at 5368.723 kb on - strand, within Psyr_4504 at 5368.723 kb on - strand, within Psyr_4504 at 5368.723 kb on - strand, within Psyr_4504 at 5368.723 kb on - strand, within Psyr_4504 at 5368.723 kb on - strand, within Psyr_4504 at 5368.821 kb on + strand, within Psyr_4504 at 5368.884 kb on + strand, within Psyr_4504 at 5368.884 kb on + strand, within Psyr_4504 at 5368.885 kb on - strand, within Psyr_4504 at 5369.031 kb on + strand, within Psyr_4504 at 5369.032 kb on - strand, within Psyr_4504 at 5369.032 kb on - strand, within Psyr_4504 at 5369.032 kb on - strand, within Psyr_4504 at 5369.032 kb on - strand, within Psyr_4504 at 5369.232 kb on - strand at 5369.252 kb on - strand at 5369.252 kb on - strand at 5369.252 kb on - strand at 5369.254 kb on + strand at 5369.254 kb on + strand at 5369.254 kb on + strand at 5369.254 kb on + strand at 5369.255 kb on - strand at 5369.255 kb on - strand at 5369.255 kb on - strand at 5369.255 kb on - strand at 5369.270 kb on - strand at 5369.273 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Flavone 0.125 mg/ml remove 5,366,481 - Psyr_4502 0.26 +0.0 5,366,491 + Psyr_4502 0.27 -0.0 5,366,491 + Psyr_4502 0.27 -0.5 5,366,491 + Psyr_4502 0.27 +0.7 5,366,516 + Psyr_4502 0.29 +0.1 5,366,516 + Psyr_4502 0.29 +0.2 5,366,519 + Psyr_4502 0.29 +0.9 5,366,520 - Psyr_4502 0.29 +0.3 5,366,579 + Psyr_4502 0.33 +0.7 5,366,580 - Psyr_4502 0.33 +1.5 5,366,580 - Psyr_4502 0.33 -3.6 5,366,581 + Psyr_4502 0.34 -0.3 5,366,581 + Psyr_4502 0.34 -0.4 5,366,582 - Psyr_4502 0.34 -1.1 5,366,582 - Psyr_4502 0.34 +0.3 5,366,582 - Psyr_4502 0.34 +0.1 5,366,582 - Psyr_4502 0.34 -0.6 5,366,582 - Psyr_4502 0.34 +0.1 5,366,952 + Psyr_4502 0.62 -0.9 5,366,952 + Psyr_4502 0.62 +0.5 5,366,953 - Psyr_4502 0.62 +0.7 5,366,953 - Psyr_4502 0.62 +0.1 5,366,953 - Psyr_4502 0.62 -0.9 5,366,953 - Psyr_4502 0.62 -0.5 5,366,953 - Psyr_4502 0.62 +0.9 5,366,953 - Psyr_4502 0.62 +0.7 5,366,953 - Psyr_4502 0.62 +0.5 5,366,953 - Psyr_4502 0.62 -0.3 5,367,133 - Psyr_4502 0.75 +0.7 5,367,283 + Psyr_4502 0.87 -1.1 5,367,625 + Psyr_4503 0.19 +0.9 5,367,626 - Psyr_4503 0.19 +2.3 5,367,943 + Psyr_4503 0.55 -1.4 5,367,944 - Psyr_4503 0.55 +0.5 5,368,012 + Psyr_4503 0.62 +1.7 5,368,013 - Psyr_4503 0.63 +2.5 5,368,067 + Psyr_4503 0.69 -0.2 5,368,067 + Psyr_4503 0.69 +0.4 5,368,067 + Psyr_4503 0.69 +0.1 5,368,067 + Psyr_4503 0.69 +1.3 5,368,067 + Psyr_4503 0.69 -1.3 5,368,067 + Psyr_4503 0.69 +0.9 5,368,067 + Psyr_4503 0.69 +0.3 5,368,067 + Psyr_4503 0.69 +1.1 5,368,067 + Psyr_4503 0.69 -2.1 5,368,068 - Psyr_4503 0.69 -0.4 5,368,068 - Psyr_4503 0.69 +0.7 5,368,068 - Psyr_4503 0.69 +0.6 5,368,068 - Psyr_4503 0.69 +0.1 5,368,068 - Psyr_4503 0.69 +0.1 5,368,068 - Psyr_4503 0.69 -0.2 5,368,068 - Psyr_4503 0.69 +1.1 5,368,068 - Psyr_4503 0.69 +0.6 5,368,068 - Psyr_4503 0.69 +0.1 5,368,068 - Psyr_4503 0.69 +0.0 5,368,068 - Psyr_4503 0.69 +1.7 5,368,090 + Psyr_4503 0.71 +0.4 5,368,090 + Psyr_4503 0.71 -0.2 5,368,091 - Psyr_4503 0.71 +0.4 5,368,182 + Psyr_4503 0.81 +0.3 5,368,185 + Psyr_4503 0.82 +1.0 5,368,185 + Psyr_4503 0.82 +0.2 5,368,185 + Psyr_4503 0.82 -0.3 5,368,185 + Psyr_4503 0.82 +1.2 5,368,201 + Psyr_4503 0.84 +0.5 5,368,202 - Psyr_4503 0.84 -0.8 5,368,210 + Psyr_4503 0.85 -0.3 5,368,380 + +0.0 5,368,380 + +0.2 5,368,381 - +0.3 5,368,425 + +0.3 5,368,425 + +0.4 5,368,425 + +0.7 5,368,425 + +0.5 5,368,425 + -0.4 5,368,425 + +0.2 5,368,425 + -0.4 5,368,425 + +1.7 5,368,425 + -0.7 5,368,426 - +0.5 5,368,426 - +2.3 5,368,426 - -0.7 5,368,426 - +1.0 5,368,426 - +1.1 5,368,426 - +0.3 5,368,426 - +1.7 5,368,426 - +1.0 5,368,426 - -1.3 5,368,426 - +0.3 5,368,426 - +0.0 5,368,426 - +0.7 5,368,426 - +1.4 5,368,429 + +1.1 5,368,430 - -1.3 5,368,430 - +0.3 5,368,430 - +0.2 5,368,636 - Psyr_4504 0.33 +0.0 5,368,636 - Psyr_4504 0.33 -0.4 5,368,705 + Psyr_4504 0.40 +0.7 5,368,705 + Psyr_4504 0.40 -1.0 5,368,706 - Psyr_4504 0.40 +1.8 5,368,722 + Psyr_4504 0.42 +0.5 5,368,722 + Psyr_4504 0.42 -0.6 5,368,722 + Psyr_4504 0.42 +1.3 5,368,722 + Psyr_4504 0.42 -0.5 5,368,722 + Psyr_4504 0.42 +0.3 5,368,722 + Psyr_4504 0.42 +1.4 5,368,722 + Psyr_4504 0.42 +0.1 5,368,722 + Psyr_4504 0.42 -0.5 5,368,722 + Psyr_4504 0.42 -0.5 5,368,723 - Psyr_4504 0.42 -2.2 5,368,723 - Psyr_4504 0.42 -0.3 5,368,723 - Psyr_4504 0.42 -0.3 5,368,723 - Psyr_4504 0.42 +0.1 5,368,723 - Psyr_4504 0.42 -0.3 5,368,723 - Psyr_4504 0.42 +0.3 5,368,723 - Psyr_4504 0.42 -0.6 5,368,723 - Psyr_4504 0.42 +0.7 5,368,821 + Psyr_4504 0.53 +0.7 5,368,884 + Psyr_4504 0.60 +0.6 5,368,884 + Psyr_4504 0.60 -0.4 5,368,885 - Psyr_4504 0.61 +0.1 5,369,031 + Psyr_4504 0.77 +1.0 5,369,032 - Psyr_4504 0.77 -0.4 5,369,032 - Psyr_4504 0.77 +2.1 5,369,032 - Psyr_4504 0.77 +0.0 5,369,032 - Psyr_4504 0.77 -0.5 5,369,232 - +0.5 5,369,252 - +0.5 5,369,252 - +0.9 5,369,252 - +0.1 5,369,254 + -0.0 5,369,254 + +1.1 5,369,254 + -0.2 5,369,254 + -0.6 5,369,255 - -0.2 5,369,255 - -1.1 5,369,255 - +0.6 5,369,255 - +0.5 5,369,270 - +0.7 5,369,273 - +0.1
Or see this region's nucleotide sequence