Experiment: KB with Flavone 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_3973 and Psyr_3974 overlap by 4 nucleotides Psyr_3974 and Psyr_3975 overlap by 4 nucleotides Psyr_3975 and Psyr_3976 are separated by 11 nucleotides Psyr_3976 and Psyr_3977 are separated by 109 nucleotides
Psyr_3973: Psyr_3973 - Binding-protein-dependent transport systems inner membrane component, at 4,721,038 to 4,721,853
_3973
Psyr_3974: Psyr_3974 - ABC transporter, at 4,721,850 to 4,722,632
_3974
Psyr_3975: Psyr_3975 - conserved hypothetical protein, at 4,722,629 to 4,723,354
_3975
Psyr_3976: Psyr_3976 - conserved hypothetical protein, at 4,723,366 to 4,723,983
_3976
Psyr_3977: Psyr_3977 - Urea amidolyase-related protein, at 4,724,093 to 4,728,559
_3977
Position (kb) 4722
4723
4724 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 4721.755 kb on + strand, within Psyr_3973 at 4721.755 kb on + strand, within Psyr_3973 at 4721.755 kb on + strand, within Psyr_3973 at 4721.756 kb on - strand, within Psyr_3973 at 4721.756 kb on - strand, within Psyr_3973 at 4721.859 kb on - strand at 4722.100 kb on + strand, within Psyr_3974 at 4722.258 kb on + strand, within Psyr_3974 at 4722.499 kb on + strand, within Psyr_3974 at 4722.500 kb on - strand, within Psyr_3974 at 4722.500 kb on - strand, within Psyr_3974 at 4722.546 kb on + strand, within Psyr_3974 at 4722.546 kb on + strand, within Psyr_3974 at 4722.706 kb on - strand, within Psyr_3975 at 4722.901 kb on + strand, within Psyr_3975 at 4722.902 kb on - strand, within Psyr_3975 at 4722.962 kb on + strand, within Psyr_3975 at 4722.963 kb on - strand, within Psyr_3975 at 4723.154 kb on + strand, within Psyr_3975 at 4723.154 kb on + strand, within Psyr_3975 at 4723.155 kb on - strand, within Psyr_3975 at 4723.166 kb on + strand, within Psyr_3975 at 4723.167 kb on - strand, within Psyr_3975 at 4723.167 kb on - strand, within Psyr_3975 at 4723.167 kb on - strand, within Psyr_3975 at 4723.232 kb on + strand, within Psyr_3975 at 4723.233 kb on - strand, within Psyr_3975 at 4723.564 kb on + strand, within Psyr_3976 at 4723.564 kb on + strand, within Psyr_3976 at 4723.564 kb on + strand, within Psyr_3976 at 4723.708 kb on + strand, within Psyr_3976 at 4723.709 kb on - strand, within Psyr_3976 at 4723.732 kb on + strand, within Psyr_3976 at 4723.732 kb on + strand, within Psyr_3976 at 4723.732 kb on + strand, within Psyr_3976 at 4723.732 kb on + strand, within Psyr_3976 at 4723.733 kb on - strand, within Psyr_3976 at 4723.733 kb on - strand, within Psyr_3976 at 4723.733 kb on - strand, within Psyr_3976 at 4723.733 kb on - strand, within Psyr_3976 at 4723.808 kb on + strand, within Psyr_3976 at 4723.867 kb on + strand, within Psyr_3976 at 4723.867 kb on + strand, within Psyr_3976 at 4723.868 kb on - strand, within Psyr_3976 at 4724.020 kb on + strand at 4724.021 kb on - strand at 4724.087 kb on + strand at 4724.186 kb on + strand at 4724.186 kb on + strand at 4724.186 kb on + strand at 4724.187 kb on - strand at 4724.270 kb on + strand at 4724.270 kb on + strand at 4724.270 kb on + strand at 4724.270 kb on + strand at 4724.271 kb on - strand at 4724.271 kb on - strand at 4724.271 kb on - strand at 4724.271 kb on - strand at 4724.271 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Flavone 0.125 mg/ml remove 4,721,755 + Psyr_3973 0.88 +1.3 4,721,755 + Psyr_3973 0.88 +0.1 4,721,755 + Psyr_3973 0.88 +1.1 4,721,756 - Psyr_3973 0.88 +0.4 4,721,756 - Psyr_3973 0.88 +0.9 4,721,859 - +0.6 4,722,100 + Psyr_3974 0.32 -0.2 4,722,258 + Psyr_3974 0.52 -0.5 4,722,499 + Psyr_3974 0.83 -0.1 4,722,500 - Psyr_3974 0.83 -0.0 4,722,500 - Psyr_3974 0.83 +1.0 4,722,546 + Psyr_3974 0.89 -0.4 4,722,546 + Psyr_3974 0.89 -1.5 4,722,706 - Psyr_3975 0.11 +0.5 4,722,901 + Psyr_3975 0.37 -0.6 4,722,902 - Psyr_3975 0.38 +1.5 4,722,962 + Psyr_3975 0.46 +0.3 4,722,963 - Psyr_3975 0.46 -1.5 4,723,154 + Psyr_3975 0.72 +0.8 4,723,154 + Psyr_3975 0.72 +0.5 4,723,155 - Psyr_3975 0.72 +2.5 4,723,166 + Psyr_3975 0.74 -0.5 4,723,167 - Psyr_3975 0.74 +0.2 4,723,167 - Psyr_3975 0.74 +0.4 4,723,167 - Psyr_3975 0.74 +0.5 4,723,232 + Psyr_3975 0.83 -0.2 4,723,233 - Psyr_3975 0.83 +0.8 4,723,564 + Psyr_3976 0.32 +0.6 4,723,564 + Psyr_3976 0.32 -0.4 4,723,564 + Psyr_3976 0.32 -0.1 4,723,708 + Psyr_3976 0.55 +1.2 4,723,709 - Psyr_3976 0.56 -0.5 4,723,732 + Psyr_3976 0.59 -0.9 4,723,732 + Psyr_3976 0.59 +0.9 4,723,732 + Psyr_3976 0.59 +1.1 4,723,732 + Psyr_3976 0.59 -1.1 4,723,733 - Psyr_3976 0.59 -0.9 4,723,733 - Psyr_3976 0.59 +0.1 4,723,733 - Psyr_3976 0.59 -0.6 4,723,733 - Psyr_3976 0.59 -2.2 4,723,808 + Psyr_3976 0.72 +0.3 4,723,867 + Psyr_3976 0.81 +0.4 4,723,867 + Psyr_3976 0.81 +0.5 4,723,868 - Psyr_3976 0.81 -1.1 4,724,020 + -0.5 4,724,021 - +0.6 4,724,087 + -0.3 4,724,186 + -0.5 4,724,186 + +0.1 4,724,186 + +0.3 4,724,187 - +0.3 4,724,270 + -0.1 4,724,270 + -1.2 4,724,270 + -1.1 4,724,270 + +1.1 4,724,271 - -0.0 4,724,271 - +0.8 4,724,271 - +1.4 4,724,271 - +3.2 4,724,271 - +0.9
Or see this region's nucleotide sequence