Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_3300

Experiment: KB with Flavone 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Flavone 0.125 mg/ml
3,947,401	-		Psyr_3298	0.69	-0.2
3,947,401	-		Psyr_3298	0.69	+0.2
3,947,532	+				-1.2
3,948,161	-		Psyr_3299	0.69	-0.2
3,948,200	+		Psyr_3299	0.75	+0.3
3,948,200	+		Psyr_3299	0.75	-0.9
3,948,299	+				+0.9
3,948,300	-				-0.5
3,948,345	+				+0.0
3,948,346	-				-0.5
3,948,479	-		Psyr_3300	0.14	-0.3
3,948,506	+		Psyr_3300	0.17	+2.0
3,948,535	+		Psyr_3300	0.20	+1.2
3,948,535	+		Psyr_3300	0.20	+0.6
3,948,535	+		Psyr_3300	0.20	+0.2
3,948,535	+		Psyr_3300	0.20	+1.1
3,948,536	-		Psyr_3300	0.21	+1.4
3,948,536	-		Psyr_3300	0.21	-0.3
3,948,536	-		Psyr_3300	0.21	-1.0
3,948,536	-		Psyr_3300	0.21	-1.0
3,948,536	-		Psyr_3300	0.21	+0.6
3,948,539	-		Psyr_3300	0.21	-0.7
3,948,539	-		Psyr_3300	0.21	-0.2
3,948,789	+		Psyr_3300	0.48	-0.4
3,949,006	+		Psyr_3300	0.72	+0.6
3,949,007	-		Psyr_3300	0.72	-2.1
3,949,205	+				+0.7
3,949,205	+				+0.0
3,949,205	+				+0.7
3,949,206	-				+0.7
3,949,206	-				-1.6
3,949,206	-				-0.6
3,949,206	-				-1.6
3,949,206	-				-0.4
3,949,206	-				+0.2
3,949,206	-				-0.4
3,949,206	-				+0.8
3,949,206	-				-1.0
3,949,206	-				-1.0
3,949,206	-				+0.3
3,949,286	+				-1.7
3,949,335	+				+0.4
3,949,589	-				+0.1
3,949,589	-				-0.1
3,949,614	+				-0.1
3,949,614	+				-0.3
3,949,614	+				-0.4
3,949,614	+				+0.0
3,949,614	+				+0.9
3,949,614	+				-0.6
3,949,614	+				+0.1
3,949,615	-				+0.3
3,949,615	-				-0.4
3,949,615	-				+0.6
3,949,615	-				-1.6
3,949,616	+				-0.2
3,949,616	+				-0.7
3,949,616	+				-0.3
3,949,617	-				+0.4
3,949,617	-				-0.6
3,949,617	-				+0.1
3,949,617	-				+0.2
3,949,617	-				-0.6
3,949,617	-				+0.4
3,949,617	-				+0.7
3,949,617	-				+0.2
3,949,618	+				+1.8
3,949,618	+				+0.9
3,949,619	-				+1.7
3,949,626	+				-0.7
3,949,631	-				+0.1
3,949,656	-				+0.1
3,949,668	+				+0.0
3,949,669	-				+0.9
3,949,669	-				-0.2
3,949,698	-				-0.1
3,949,731	-				-0.6
3,949,766	+				+0.1
3,949,767	-				+0.7
3,949,842	-				+0.4
3,949,946	+		Psyr_3301	0.11	+0.0
3,949,946	+		Psyr_3301	0.11	-1.2
3,949,946	+		Psyr_3301	0.11	-0.0
3,949,946	+		Psyr_3301	0.11	-0.2
3,949,946	+		Psyr_3301	0.11	-1.2
3,949,947	-		Psyr_3301	0.11	-1.3
3,949,947	-		Psyr_3301	0.11	-0.2
3,949,947	-		Psyr_3301	0.11	-0.9
3,949,947	-		Psyr_3301	0.11	-1.2
3,950,009	+		Psyr_3301	0.15	+1.0