Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1991

Experiment: KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x
2,193,222	+				-0.7
2,193,223	-				-0.3
2,193,483	-				-0.4
2,193,514	+				+0.1
2,193,514	+				+1.4
2,193,515	-				-0.3
2,193,515	-				+0.8
2,193,520	+				-0.4
2,193,520	+				-0.5
2,193,520	+				-0.0
2,193,520	+				-1.1
2,193,520	+				+0.3
2,193,521	-				-0.1
2,193,521	-				+0.7
2,193,521	-				+0.7
2,193,524	+				-2.7
2,193,524	+				+0.8
2,193,524	+				+0.5
2,193,524	+				+0.8
2,193,524	+				-0.2
2,193,536	-				-1.4
2,193,536	-				+0.7
2,193,576	+				-0.9
2,193,577	-				-0.2
2,193,577	-				-0.5
2,193,577	-				+2.3
2,193,577	-				+0.2
2,193,624	-				+0.1
2,193,656	-				+1.0
2,193,656	-				-0.8
2,193,671	+				-0.4
2,193,672	-				-0.0
2,193,672	-				+0.3
2,193,691	-				+0.3
2,193,693	+				-0.2
2,193,693	+				-2.0
2,193,693	+				-0.6
2,193,693	+				-0.9
2,193,693	+				-0.4
2,193,693	+				-0.1
2,193,693	+				-0.2
2,193,693	+				+0.8
2,193,693	+				-0.7
2,193,693	+				+1.4
2,193,694	-				+0.3
2,193,694	-				-1.9
2,193,694	-				+2.2
2,193,771	+				+1.3
2,193,781	-				+0.8
2,193,850	-				-1.0
2,193,850	-				-0.3
2,193,850	-				+0.5
2,193,866	+				+1.6
2,193,866	+				-0.8
2,193,866	+				-0.1
2,193,866	+				-0.4
2,193,866	+				+0.2
2,193,866	+				-1.2
2,193,866	+				-0.3
2,193,867	-				+0.3
2,193,867	-				-0.0
2,193,867	-				-2.8
2,193,867	-				-1.9
2,193,867	-				-1.7
2,193,867	-				-2.2
2,193,867	-				-0.6
2,193,867	-				-0.0
2,193,910	+				+1.0
2,193,910	+				-0.0
2,193,911	-				+0.5
2,193,911	-				-0.8
2,193,916	+				-0.8
2,193,917	-				-0.0
2,193,917	-				-2.4
2,193,917	-				-0.0
2,193,969	+				+2.8
2,194,026	+				-0.1
2,194,027	-				+0.1
2,194,049	-				-0.0
2,194,109	+		PfGW456L13_1990	0.58	-0.3
2,194,110	-		PfGW456L13_1990	0.59	+1.2
2,194,110	-		PfGW456L13_1990	0.59	-0.4
2,194,133	+		PfGW456L13_1990	0.75	-1.3
2,194,133	+		PfGW456L13_1990	0.75	-0.7
2,194,134	-		PfGW456L13_1990	0.76	+0.3
2,194,163	+				+2.0
2,194,164	-				-0.8
2,194,164	-				+0.2
2,194,164	-				-1.0
2,194,307	+				+0.3
2,194,307	+				-1.3
2,194,307	+				+0.7
2,194,308	-				-0.9
2,194,308	-				+1.0
2,194,308	-				-0.5
2,194,411	-		PfGW456L13_1991	0.16	-0.1
2,194,482	-		PfGW456L13_1991	0.20	-1.5
2,194,633	+		PfGW456L13_1991	0.30	+0.7
2,194,633	+		PfGW456L13_1991	0.30	+0.0
2,194,634	-		PfGW456L13_1991	0.30	-0.1
2,194,715	+		PfGW456L13_1991	0.35	+1.8
2,194,716	-		PfGW456L13_1991	0.35	-2.0
2,194,716	-		PfGW456L13_1991	0.35	-0.2
2,194,810	+		PfGW456L13_1991	0.41	-0.0
2,194,810	+		PfGW456L13_1991	0.41	-2.4
2,194,810	+		PfGW456L13_1991	0.41	+1.2
2,194,810	+		PfGW456L13_1991	0.41	-0.8
2,194,810	+		PfGW456L13_1991	0.41	+0.5
2,194,810	+		PfGW456L13_1991	0.41	+0.4
2,194,811	-		PfGW456L13_1991	0.41	-0.4
2,194,811	-		PfGW456L13_1991	0.41	+2.1
2,194,811	-		PfGW456L13_1991	0.41	+0.5
2,194,811	-		PfGW456L13_1991	0.41	+0.1
2,194,814	+		PfGW456L13_1991	0.41	+0.3
2,194,814	+		PfGW456L13_1991	0.41	-2.6
2,194,814	+		PfGW456L13_1991	0.41	+1.1
2,194,815	-		PfGW456L13_1991	0.41	-0.4
2,194,856	+		PfGW456L13_1991	0.44	+0.6
2,194,857	-		PfGW456L13_1991	0.44	+1.6
2,194,875	+		PfGW456L13_1991	0.45	-1.4
2,194,875	+		PfGW456L13_1991	0.45	-1.5
2,194,875	+		PfGW456L13_1991	0.45	+1.0
2,194,875	+		PfGW456L13_1991	0.45	+0.4
2,194,875	+		PfGW456L13_1991	0.45	+1.1
2,194,876	-		PfGW456L13_1991	0.45	+0.2
2,194,876	-		PfGW456L13_1991	0.45	+0.3
2,194,876	-		PfGW456L13_1991	0.45	-0.3
2,194,876	-		PfGW456L13_1991	0.45	-0.1
2,194,876	-		PfGW456L13_1991	0.45	-1.4
2,194,876	-		PfGW456L13_1991	0.45	-0.3
2,194,876	-		PfGW456L13_1991	0.45	+0.2
2,194,876	-		PfGW456L13_1991	0.45	-1.6
2,194,876	-		PfGW456L13_1991	0.45	+1.0
2,195,031	+		PfGW456L13_1991	0.55	+0.0
2,195,032	-		PfGW456L13_1991	0.55	+1.4
2,195,240	-		PfGW456L13_1991	0.68	+0.0
2,195,517	-		PfGW456L13_1991	0.85	-0.5
2,195,517	-		PfGW456L13_1991	0.85	-0.6
2,195,517	-		PfGW456L13_1991	0.85	-0.1
2,195,551	-		PfGW456L13_1991	0.87	+0.8
2,195,590	+		PfGW456L13_1991	0.89	+1.3
2,195,814	+				+0.5
2,195,814	+				-0.4
2,195,814	+				-0.2
2,195,815	-				+0.9
2,195,815	-				+0.2
2,195,962	+		PfGW456L13_1992	0.30	-0.2
2,195,963	-		PfGW456L13_1992	0.30	-0.9
2,195,963	-		PfGW456L13_1992	0.30	-0.0
2,195,963	-				-1.6
2,195,963	-		PfGW456L13_1992	0.30	-0.9
2,195,963	-		PfGW456L13_1992	0.30	+1.2
2,195,963	-		PfGW456L13_1992	0.30	+1.4
2,195,963	-		PfGW456L13_1992	0.30	-0.4
2,195,963	-		PfGW456L13_1992	0.30	-1.2
2,195,963	-		PfGW456L13_1992	0.30	-0.1
2,196,082	+		PfGW456L13_1992	0.47	-0.0
2,196,082	+		PfGW456L13_1992	0.47	-1.5
2,196,082	+		PfGW456L13_1992	0.47	+1.0
2,196,082	+		PfGW456L13_1992	0.47	+1.6
2,196,082	+		PfGW456L13_1992	0.47	+0.6
2,196,082	+		PfGW456L13_1992	0.47	+1.2
2,196,082	+		PfGW456L13_1992	0.47	-1.4
2,196,083	-		PfGW456L13_1992	0.47	+0.9
2,196,083	-		PfGW456L13_1992	0.47	-1.0
2,196,083	-		PfGW456L13_1992	0.47	-0.1
2,196,083	-		PfGW456L13_1992	0.47	+0.8
2,196,083	-		PfGW456L13_1992	0.47	+1.0
2,196,286	+		PfGW456L13_1992	0.77	+0.6
2,196,287	-		PfGW456L13_1992	0.77	-1.0
2,196,334	+		PfGW456L13_1992	0.84	+0.5
2,196,334	+		PfGW456L13_1992	0.84	-0.5
2,196,335	-		PfGW456L13_1992	0.84	-0.5
2,196,335	-		PfGW456L13_1992	0.84	-1.8
2,196,436	+				-2.4
2,196,437	-				-0.0
2,196,437	-				+1.8
2,196,497	+				+0.0
2,196,497	+				-0.9
2,196,497	+				-0.1
2,196,498	-				-0.6
2,196,531	+				-0.5
2,196,531	+				+0.1
2,196,532	-				+1.6
2,196,532	-				-0.5
2,196,632	+				-0.0