Strain Fitness in Pseudomonas putida KT2440 around PP_5191

Experiment: 3-methyl-3-butenol (pure) 0.25 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	3-methyl-3-butenol (pure) 0.25 vol%
5,920,723	-		PP_5190	0.78	+0.5
5,920,911	-		PP_5190	0.89	+0.6
5,921,103	+				-0.9
5,921,245	+		PP_5191	0.22	-0.8
5,921,278	+		PP_5191	0.32	-0.3
5,921,295	-		PP_5191	0.37	+0.5
5,921,322	+		PP_5191	0.46	-2.0
5,921,525	+				+0.6
5,921,565	-				+0.5
5,921,610	-				+0.4
5,921,621	-				-0.2
5,921,642	+				+0.4
5,921,643	-				+0.2
5,921,643	-				+0.4
5,921,643	-				-2.7
5,921,643	-				+0.4
5,921,692	-				+0.7
5,921,693	+				-1.1
5,921,693	+				+2.2
5,921,694	-				+0.4
5,921,694	-				+0.2
5,921,694	-				-0.2
5,921,730	+				+1.0
5,921,731	-				+0.6
5,921,782	+				+0.1
5,921,782	+				+0.8
5,921,782	+				-0.5
5,921,782	+				-0.2
5,921,783	-				-0.4
5,921,783	-				+0.3
5,921,783	-				-1.2
5,921,918	+		PP_5192	0.13	+0.7
5,921,918	+		PP_5192	0.13	-1.2
5,921,918	+		PP_5192	0.13	+0.3
5,921,919	-		PP_5192	0.13	-0.3
5,922,026	+		PP_5192	0.16	+1.2
5,922,066	-		PP_5192	0.18	+0.4
5,922,066	-		PP_5192	0.18	-0.7
5,922,066	-		PP_5192	0.18	+1.4
5,922,128	+		PP_5192	0.20	-0.1
5,922,129	-		PP_5192	0.20	+1.0
5,922,398	+		PP_5192	0.29	-1.5
5,922,398	+		PP_5192	0.29	-0.8
5,922,414	-		PP_5192	0.30	+0.8
5,922,443	-		PP_5192	0.31	+0.4
5,922,455	+		PP_5192	0.31	-0.3
5,922,477	-		PP_5192	0.32	-0.7
5,922,477	-		PP_5192	0.32	+0.8
5,922,480	+		PP_5192	0.32	+0.2
5,922,481	-		PP_5192	0.32	+0.3
5,922,481	-		PP_5192	0.32	-0.5
5,922,481	-		PP_5192	0.32	+0.1