Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3665

Experiment: Maltitol 20mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEchvi_3664 and Echvi_3665 are separated by 241 nucleotidesEchvi_3665 and Echvi_3666 are separated by 3 nucleotides Echvi_3664: Echvi_3664 - hypothetical protein, at 4,352,490 to 4,353,314 _3664 Echvi_3665: Echvi_3665 - Bacteroidetes-specific putative membrane protein, at 4,353,556 to 4,354,524 _3665 Echvi_3666: Echvi_3666 - conserved repeat domain, at 4,354,528 to 4,373,214 _3666 Position (kb) 4353 4354 4355Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 4352.566 kb on - strandat 4352.566 kb on - strandat 4352.621 kb on + strand, within Echvi_3664at 4352.621 kb on + strand, within Echvi_3664at 4352.643 kb on + strand, within Echvi_3664at 4352.663 kb on + strand, within Echvi_3664at 4352.696 kb on + strand, within Echvi_3664at 4352.696 kb on + strand, within Echvi_3664at 4352.696 kb on + strand, within Echvi_3664at 4352.697 kb on - strand, within Echvi_3664at 4352.704 kb on + strand, within Echvi_3664at 4352.704 kb on + strand, within Echvi_3664at 4352.705 kb on - strand, within Echvi_3664at 4352.765 kb on + strand, within Echvi_3664at 4352.766 kb on - strand, within Echvi_3664at 4352.774 kb on - strand, within Echvi_3664at 4352.816 kb on + strand, within Echvi_3664at 4352.816 kb on + strand, within Echvi_3664at 4352.816 kb on + strand, within Echvi_3664at 4352.816 kb on + strand, within Echvi_3664at 4352.816 kb on + strand, within Echvi_3664at 4352.818 kb on + strand, within Echvi_3664at 4352.818 kb on + strand, within Echvi_3664at 4352.818 kb on + strand, within Echvi_3664at 4352.818 kb on + strand, within Echvi_3664at 4352.819 kb on - strand, within Echvi_3664at 4352.819 kb on - strand, within Echvi_3664at 4352.884 kb on + strand, within Echvi_3664at 4352.885 kb on - strand, within Echvi_3664at 4352.897 kb on + strand, within Echvi_3664at 4352.901 kb on - strand, within Echvi_3664at 4352.940 kb on + strand, within Echvi_3664at 4352.940 kb on + strand, within Echvi_3664at 4352.940 kb on + strand, within Echvi_3664at 4352.940 kb on + strand, within Echvi_3664at 4352.940 kb on + strand, within Echvi_3664at 4352.940 kb on + strand, within Echvi_3664at 4352.941 kb on - strand, within Echvi_3664at 4352.941 kb on - strand, within Echvi_3664at 4352.941 kb on - strand, within Echvi_3664at 4352.941 kb on - strand, within Echvi_3664at 4352.941 kb on - strand, within Echvi_3664at 4352.952 kb on + strand, within Echvi_3664at 4352.952 kb on + strand, within Echvi_3664at 4352.973 kb on + strand, within Echvi_3664at 4353.056 kb on + strand, within Echvi_3664at 4353.059 kb on + strand, within Echvi_3664at 4353.059 kb on + strand, within Echvi_3664at 4353.060 kb on - strand, within Echvi_3664at 4353.060 kb on - strand, within Echvi_3664at 4353.189 kb on + strand, within Echvi_3664at 4353.189 kb on + strand, within Echvi_3664at 4353.190 kb on - strand, within Echvi_3664at 4353.190 kb on - strand, within Echvi_3664at 4353.210 kb on + strand, within Echvi_3664at 4353.282 kb on + strandat 4353.282 kb on + strandat 4353.282 kb on + strandat 4353.304 kb on - strandat 4353.368 kb on - strandat 4353.416 kb on + strandat 4353.439 kb on + strandat 4353.493 kb on + strandat 4353.550 kb on + strandat 4353.583 kb on + strandat 4353.585 kb on + strandat 4353.586 kb on - strandat 4353.597 kb on + strandat 4353.639 kb on - strandat 4353.639 kb on - strandat 4353.656 kb on - strand, within Echvi_3665at 4353.656 kb on - strand, within Echvi_3665at 4353.660 kb on + strand, within Echvi_3665at 4353.660 kb on + strand, within Echvi_3665at 4353.661 kb on - strand, within Echvi_3665at 4353.668 kb on + strand, within Echvi_3665at 4353.668 kb on + strand, within Echvi_3665at 4353.669 kb on - strand, within Echvi_3665at 4353.669 kb on - strand, within Echvi_3665at 4353.733 kb on - strand, within Echvi_3665at 4353.767 kb on - strand, within Echvi_3665at 4353.833 kb on - strand, within Echvi_3665at 4353.840 kb on - strand, within Echvi_3665at 4353.961 kb on + strand, within Echvi_3665at 4353.962 kb on - strand, within Echvi_3665at 4353.962 kb on - strand, within Echvi_3665at 4353.962 kb on - strand, within Echvi_3665at 4353.962 kb on - strand, within Echvi_3665at 4353.962 kb on - strand, within Echvi_3665at 4353.994 kb on + strand, within Echvi_3665at 4353.999 kb on + strand, within Echvi_3665at 4353.999 kb on + strand, within Echvi_3665at 4353.999 kb on + strand, within Echvi_3665at 4354.000 kb on - strand, within Echvi_3665at 4354.000 kb on - strand, within Echvi_3665at 4354.001 kb on + strand, within Echvi_3665at 4354.002 kb on - strand, within Echvi_3665at 4354.002 kb on - strand, within Echvi_3665at 4354.010 kb on - strand, within Echvi_3665at 4354.032 kb on + strand, within Echvi_3665at 4354.033 kb on - strand, within Echvi_3665at 4354.125 kb on + strand, within Echvi_3665at 4354.125 kb on + strand, within Echvi_3665at 4354.126 kb on - strand, within Echvi_3665at 4354.126 kb on - strand, within Echvi_3665at 4354.135 kb on + strand, within Echvi_3665at 4354.135 kb on + strand, within Echvi_3665at 4354.135 kb on + strand, within Echvi_3665at 4354.136 kb on - strand, within Echvi_3665at 4354.211 kb on + strand, within Echvi_3665at 4354.211 kb on + strand, within Echvi_3665at 4354.211 kb on + strand, within Echvi_3665at 4354.212 kb on - strand, within Echvi_3665at 4354.361 kb on + strand, within Echvi_3665at 4354.376 kb on + strand, within Echvi_3665at 4354.391 kb on + strand, within Echvi_3665at 4354.391 kb on + strand, within Echvi_3665at 4354.392 kb on - strand, within Echvi_3665at 4354.392 kb on - strand, within Echvi_3665at 4354.400 kb on + strand, within Echvi_3665at 4354.433 kb on + strandat 4354.433 kb on + strandat 4354.433 kb on + strandat 4354.433 kb on + strandat 4354.434 kb on - strandat 4354.440 kb on + strandat 4354.451 kb on - strandat 4354.470 kb on + strandat 4354.470 kb on + strandat 4354.471 kb on - strandat 4354.471 kb on - strandat 4354.471 kb on - strandat 4354.471 kb on - strandat 4354.530 kb on - strandat 4354.587 kb on - strandat 4354.601 kb on + strandat 4354.601 kb on + strandat 4354.602 kb on - strandat 4354.602 kb on - strandat 4354.604 kb on + strandat 4354.604 kb on + strandat 4354.604 kb on + strandat 4354.604 kb on + strandat 4354.605 kb on - strandat 4354.607 kb on + strandat 4354.608 kb on - strandat 4354.608 kb on - strandat 4354.608 kb on - strandat 4354.608 kb on - strandat 4354.611 kb on + strandat 4354.611 kb on + strandat 4354.611 kb on + strandat 4354.611 kb on + strandat 4354.705 kb on - strandat 4354.705 kb on - strandat 4354.741 kb on - strandat 4354.872 kb on + strandat 4354.909 kb on - strandat 4354.989 kb on + strandat 4354.989 kb on + strandat 4354.990 kb on - strandat 4354.990 kb on - strandat 4354.990 kb on - strandat 4355.008 kb on + strandat 4355.022 kb on + strandat 4355.023 kb on - strandat 4355.023 kb on - strandat 4355.024 kb on + strandat 4355.024 kb on + strandat 4355.024 kb on + strandat 4355.024 kb on + strandat 4355.025 kb on - strandat 4355.025 kb on - strandat 4355.041 kb on + strandat 4355.059 kb on + strandat 4355.076 kb on + strandat 4355.105 kb on + strandat 4355.106 kb on - strandat 4355.126 kb on + strandat 4355.126 kb on + strandat 4355.194 kb on + strandat 4355.243 kb on + strandat 4355.284 kb on + strandat 4355.308 kb on + strandat 4355.340 kb on + strandat 4355.341 kb on - strandat 4355.423 kb on + strandat 4355.423 kb on + strandat 4355.423 kb on + strandat 4355.423 kb on + strandat 4355.424 kb on - strandat 4355.424 kb on - strandat 4355.429 kb on - strandat 4355.484 kb on + strandat 4355.499 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Maltitol 20mM (C)
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4,352,566 - +0.5
4,352,566 - -0.2
4,352,621 + Echvi_3664 0.16 -1.0
4,352,621 + Echvi_3664 0.16 -0.6
4,352,643 + Echvi_3664 0.19 -1.5
4,352,663 + Echvi_3664 0.21 +0.3
4,352,696 + Echvi_3664 0.25 +0.2
4,352,696 + Echvi_3664 0.25 +3.7
4,352,696 + Echvi_3664 0.25 -0.0
4,352,697 - Echvi_3664 0.25 +0.1
4,352,704 + Echvi_3664 0.26 +0.0
4,352,704 + Echvi_3664 0.26 -0.2
4,352,705 - Echvi_3664 0.26 -2.0
4,352,765 + Echvi_3664 0.33 +0.0
4,352,766 - Echvi_3664 0.33 -0.4
4,352,774 - Echvi_3664 0.34 -0.1
4,352,816 + Echvi_3664 0.40 -0.7
4,352,816 + Echvi_3664 0.40 -1.2
4,352,816 + Echvi_3664 0.40 -0.7
4,352,816 + Echvi_3664 0.40 -0.0
4,352,816 + Echvi_3664 0.40 +0.2
4,352,818 + Echvi_3664 0.40 -0.9
4,352,818 + Echvi_3664 0.40 +0.8
4,352,818 + Echvi_3664 0.40 +0.3
4,352,818 + Echvi_3664 0.40 +0.4
4,352,819 - Echvi_3664 0.40 +3.4
4,352,819 - Echvi_3664 0.40 +0.7
4,352,884 + Echvi_3664 0.48 +1.8
4,352,885 - Echvi_3664 0.48 -0.9
4,352,897 + Echvi_3664 0.49 -0.9
4,352,901 - Echvi_3664 0.50 -1.5
4,352,940 + Echvi_3664 0.55 -1.2
4,352,940 + Echvi_3664 0.55 +1.5
4,352,940 + Echvi_3664 0.55 -1.9
4,352,940 + Echvi_3664 0.55 +1.2
4,352,940 + Echvi_3664 0.55 +0.2
4,352,940 + Echvi_3664 0.55 +0.0
4,352,941 - Echvi_3664 0.55 +0.3
4,352,941 - Echvi_3664 0.55 -0.4
4,352,941 - Echvi_3664 0.55 -0.2
4,352,941 - Echvi_3664 0.55 -0.1
4,352,941 - Echvi_3664 0.55 +1.3
4,352,952 + Echvi_3664 0.56 -1.2
4,352,952 + Echvi_3664 0.56 +0.8
4,352,973 + Echvi_3664 0.59 -1.5
4,353,056 + Echvi_3664 0.69 +0.0
4,353,059 + Echvi_3664 0.69 -1.4
4,353,059 + Echvi_3664 0.69 +1.0
4,353,060 - Echvi_3664 0.69 -0.2
4,353,060 - Echvi_3664 0.69 +1.1
4,353,189 + Echvi_3664 0.85 -1.3
4,353,189 + Echvi_3664 0.85 +0.8
4,353,190 - Echvi_3664 0.85 -0.9
4,353,190 - Echvi_3664 0.85 +0.3
4,353,210 + Echvi_3664 0.87 -1.0
4,353,282 + -1.1
4,353,282 + -0.6
4,353,282 + +0.6
4,353,304 - -2.0
4,353,368 - +2.3
4,353,416 + -0.4
4,353,439 + -0.2
4,353,493 + +1.1
4,353,550 + +0.5
4,353,583 + +0.9
4,353,585 + -0.5
4,353,586 - -0.4
4,353,597 + +0.3
4,353,639 - +0.2
4,353,639 - +0.2
4,353,656 - Echvi_3665 0.10 +0.5
4,353,656 - Echvi_3665 0.10 +4.0
4,353,660 + Echvi_3665 0.11 +0.8
4,353,660 + Echvi_3665 0.11 +1.5
4,353,661 - Echvi_3665 0.11 +0.2
4,353,668 + Echvi_3665 0.12 +0.4
4,353,668 + Echvi_3665 0.12 -0.4
4,353,669 - Echvi_3665 0.12 +0.0
4,353,669 - Echvi_3665 0.12 +1.0
4,353,733 - Echvi_3665 0.18 +0.1
4,353,767 - Echvi_3665 0.22 +0.3
4,353,833 - Echvi_3665 0.29 +2.1
4,353,840 - Echvi_3665 0.29 -0.6
4,353,961 + Echvi_3665 0.42 +0.5
4,353,962 - Echvi_3665 0.42 -1.2
4,353,962 - Echvi_3665 0.42 +0.3
4,353,962 - Echvi_3665 0.42 -0.3
4,353,962 - Echvi_3665 0.42 -0.8
4,353,962 - Echvi_3665 0.42 +1.1
4,353,994 + Echvi_3665 0.45 -2.0
4,353,999 + Echvi_3665 0.46 +0.8
4,353,999 + Echvi_3665 0.46 -0.1
4,353,999 + Echvi_3665 0.46 -0.2
4,354,000 - Echvi_3665 0.46 +2.4
4,354,000 - Echvi_3665 0.46 +2.4
4,354,001 + Echvi_3665 0.46 -0.5
4,354,002 - Echvi_3665 0.46 -0.2
4,354,002 - Echvi_3665 0.46 +0.4
4,354,010 - Echvi_3665 0.47 +0.2
4,354,032 + Echvi_3665 0.49 +2.0
4,354,033 - Echvi_3665 0.49 +0.3
4,354,125 + Echvi_3665 0.59 -0.7
4,354,125 + Echvi_3665 0.59 -0.9
4,354,126 - Echvi_3665 0.59 -0.1
4,354,126 - Echvi_3665 0.59 +1.0
4,354,135 + Echvi_3665 0.60 +0.8
4,354,135 + Echvi_3665 0.60 +1.2
4,354,135 + Echvi_3665 0.60 +0.5
4,354,136 - Echvi_3665 0.60 +0.4
4,354,211 + Echvi_3665 0.68 +0.6
4,354,211 + Echvi_3665 0.68 -0.2
4,354,211 + Echvi_3665 0.68 -0.6
4,354,212 - Echvi_3665 0.68 +0.8
4,354,361 + Echvi_3665 0.83 -0.2
4,354,376 + Echvi_3665 0.85 +0.7
4,354,391 + Echvi_3665 0.86 +0.1
4,354,391 + Echvi_3665 0.86 +0.3
4,354,392 - Echvi_3665 0.86 +0.0
4,354,392 - Echvi_3665 0.86 -0.4
4,354,400 + Echvi_3665 0.87 +1.0
4,354,433 + +0.2
4,354,433 + +1.0
4,354,433 + +1.7
4,354,433 + +0.6
4,354,434 - -1.0
4,354,440 + -1.5
4,354,451 - -0.9
4,354,470 + +0.4
4,354,470 + +1.9
4,354,471 - -0.3
4,354,471 - +0.3
4,354,471 - +0.1
4,354,471 - +0.9
4,354,530 - -0.5
4,354,587 - +0.7
4,354,601 + +0.8
4,354,601 + +3.8
4,354,602 - -1.9
4,354,602 - +3.5
4,354,604 + +0.5
4,354,604 + +0.6
4,354,604 + -2.2
4,354,604 + -0.2
4,354,605 - +0.7
4,354,607 + -0.3
4,354,608 - +0.7
4,354,608 - +2.0
4,354,608 - -0.1
4,354,608 - -1.7
4,354,611 + +0.6
4,354,611 + +0.8
4,354,611 + +0.5
4,354,611 + -0.5
4,354,705 - +0.5
4,354,705 - -0.3
4,354,741 - +0.7
4,354,872 + -0.4
4,354,909 - +0.3
4,354,989 + -0.2
4,354,989 + -1.0
4,354,990 - +0.6
4,354,990 - -3.7
4,354,990 - -2.0
4,355,008 + +0.7
4,355,022 + +1.3
4,355,023 - +0.7
4,355,023 - +0.5
4,355,024 + +0.1
4,355,024 + -0.0
4,355,024 + +0.5
4,355,024 + -0.3
4,355,025 - +0.6
4,355,025 - +0.5
4,355,041 + -0.2
4,355,059 + +0.6
4,355,076 + +0.8
4,355,105 + +0.1
4,355,106 - -0.9
4,355,126 + +0.4
4,355,126 + -0.7
4,355,194 + -0.1
4,355,243 + -1.4
4,355,284 + -0.7
4,355,308 + -1.3
4,355,340 + +1.6
4,355,341 - -0.1
4,355,423 + +0.1
4,355,423 + -0.1
4,355,423 + +0.2
4,355,423 + +1.8
4,355,424 - +0.8
4,355,424 - -0.2
4,355,429 - +1.2
4,355,484 + -1.0
4,355,499 - +0.9

Or see this region's nucleotide sequence