Experiment: Maltitol 20mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_3664 and Echvi_3665 are separated by 241 nucleotides Echvi_3665 and Echvi_3666 are separated by 3 nucleotides
Echvi_3664: Echvi_3664 - hypothetical protein, at 4,352,490 to 4,353,314
_3664
Echvi_3665: Echvi_3665 - Bacteroidetes-specific putative membrane protein, at 4,353,556 to 4,354,524
_3665
Echvi_3666: Echvi_3666 - conserved repeat domain, at 4,354,528 to 4,373,214
_3666
Position (kb)
4353
4354
4355 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 4352.566 kb on - strand at 4352.566 kb on - strand at 4352.621 kb on + strand, within Echvi_3664 at 4352.621 kb on + strand, within Echvi_3664 at 4352.643 kb on + strand, within Echvi_3664 at 4352.663 kb on + strand, within Echvi_3664 at 4352.696 kb on + strand, within Echvi_3664 at 4352.696 kb on + strand, within Echvi_3664 at 4352.696 kb on + strand, within Echvi_3664 at 4352.697 kb on - strand, within Echvi_3664 at 4352.704 kb on + strand, within Echvi_3664 at 4352.704 kb on + strand, within Echvi_3664 at 4352.705 kb on - strand, within Echvi_3664 at 4352.765 kb on + strand, within Echvi_3664 at 4352.766 kb on - strand, within Echvi_3664 at 4352.774 kb on - strand, within Echvi_3664 at 4352.816 kb on + strand, within Echvi_3664 at 4352.816 kb on + strand, within Echvi_3664 at 4352.816 kb on + strand, within Echvi_3664 at 4352.816 kb on + strand, within Echvi_3664 at 4352.816 kb on + strand, within Echvi_3664 at 4352.818 kb on + strand, within Echvi_3664 at 4352.818 kb on + strand, within Echvi_3664 at 4352.818 kb on + strand, within Echvi_3664 at 4352.818 kb on + strand, within Echvi_3664 at 4352.819 kb on - strand, within Echvi_3664 at 4352.819 kb on - strand, within Echvi_3664 at 4352.884 kb on + strand, within Echvi_3664 at 4352.885 kb on - strand, within Echvi_3664 at 4352.897 kb on + strand, within Echvi_3664 at 4352.901 kb on - strand, within Echvi_3664 at 4352.940 kb on + strand, within Echvi_3664 at 4352.940 kb on + strand, within Echvi_3664 at 4352.940 kb on + strand, within Echvi_3664 at 4352.940 kb on + strand, within Echvi_3664 at 4352.940 kb on + strand, within Echvi_3664 at 4352.940 kb on + strand, within Echvi_3664 at 4352.941 kb on - strand, within Echvi_3664 at 4352.941 kb on - strand, within Echvi_3664 at 4352.941 kb on - strand, within Echvi_3664 at 4352.941 kb on - strand, within Echvi_3664 at 4352.941 kb on - strand, within Echvi_3664 at 4352.952 kb on + strand, within Echvi_3664 at 4352.952 kb on + strand, within Echvi_3664 at 4352.973 kb on + strand, within Echvi_3664 at 4353.056 kb on + strand, within Echvi_3664 at 4353.059 kb on + strand, within Echvi_3664 at 4353.059 kb on + strand, within Echvi_3664 at 4353.060 kb on - strand, within Echvi_3664 at 4353.060 kb on - strand, within Echvi_3664 at 4353.189 kb on + strand, within Echvi_3664 at 4353.189 kb on + strand, within Echvi_3664 at 4353.190 kb on - strand, within Echvi_3664 at 4353.190 kb on - strand, within Echvi_3664 at 4353.210 kb on + strand, within Echvi_3664 at 4353.282 kb on + strand at 4353.282 kb on + strand at 4353.282 kb on + strand at 4353.304 kb on - strand at 4353.368 kb on - strand at 4353.416 kb on + strand at 4353.439 kb on + strand at 4353.493 kb on + strand at 4353.550 kb on + strand at 4353.583 kb on + strand at 4353.585 kb on + strand at 4353.586 kb on - strand at 4353.597 kb on + strand at 4353.639 kb on - strand at 4353.639 kb on - strand at 4353.656 kb on - strand, within Echvi_3665 at 4353.656 kb on - strand, within Echvi_3665 at 4353.660 kb on + strand, within Echvi_3665 at 4353.660 kb on + strand, within Echvi_3665 at 4353.661 kb on - strand, within Echvi_3665 at 4353.668 kb on + strand, within Echvi_3665 at 4353.668 kb on + strand, within Echvi_3665 at 4353.669 kb on - strand, within Echvi_3665 at 4353.669 kb on - strand, within Echvi_3665 at 4353.733 kb on - strand, within Echvi_3665 at 4353.767 kb on - strand, within Echvi_3665 at 4353.833 kb on - strand, within Echvi_3665 at 4353.840 kb on - strand, within Echvi_3665 at 4353.961 kb on + strand, within Echvi_3665 at 4353.962 kb on - strand, within Echvi_3665 at 4353.962 kb on - strand, within Echvi_3665 at 4353.962 kb on - strand, within Echvi_3665 at 4353.962 kb on - strand, within Echvi_3665 at 4353.962 kb on - strand, within Echvi_3665 at 4353.994 kb on + strand, within Echvi_3665 at 4353.999 kb on + strand, within Echvi_3665 at 4353.999 kb on + strand, within Echvi_3665 at 4353.999 kb on + strand, within Echvi_3665 at 4354.000 kb on - strand, within Echvi_3665 at 4354.000 kb on - strand, within Echvi_3665 at 4354.001 kb on + strand, within Echvi_3665 at 4354.002 kb on - strand, within Echvi_3665 at 4354.002 kb on - strand, within Echvi_3665 at 4354.010 kb on - strand, within Echvi_3665 at 4354.032 kb on + strand, within Echvi_3665 at 4354.033 kb on - strand, within Echvi_3665 at 4354.125 kb on + strand, within Echvi_3665 at 4354.125 kb on + strand, within Echvi_3665 at 4354.126 kb on - strand, within Echvi_3665 at 4354.126 kb on - strand, within Echvi_3665 at 4354.135 kb on + strand, within Echvi_3665 at 4354.135 kb on + strand, within Echvi_3665 at 4354.135 kb on + strand, within Echvi_3665 at 4354.136 kb on - strand, within Echvi_3665 at 4354.211 kb on + strand, within Echvi_3665 at 4354.211 kb on + strand, within Echvi_3665 at 4354.211 kb on + strand, within Echvi_3665 at 4354.212 kb on - strand, within Echvi_3665 at 4354.361 kb on + strand, within Echvi_3665 at 4354.376 kb on + strand, within Echvi_3665 at 4354.391 kb on + strand, within Echvi_3665 at 4354.391 kb on + strand, within Echvi_3665 at 4354.392 kb on - strand, within Echvi_3665 at 4354.392 kb on - strand, within Echvi_3665 at 4354.400 kb on + strand, within Echvi_3665 at 4354.433 kb on + strand at 4354.433 kb on + strand at 4354.433 kb on + strand at 4354.433 kb on + strand at 4354.434 kb on - strand at 4354.440 kb on + strand at 4354.451 kb on - strand at 4354.470 kb on + strand at 4354.470 kb on + strand at 4354.471 kb on - strand at 4354.471 kb on - strand at 4354.471 kb on - strand at 4354.471 kb on - strand at 4354.530 kb on - strand at 4354.587 kb on - strand at 4354.601 kb on + strand at 4354.601 kb on + strand at 4354.602 kb on - strand at 4354.602 kb on - strand at 4354.604 kb on + strand at 4354.604 kb on + strand at 4354.604 kb on + strand at 4354.604 kb on + strand at 4354.605 kb on - strand at 4354.607 kb on + strand at 4354.608 kb on - strand at 4354.608 kb on - strand at 4354.608 kb on - strand at 4354.608 kb on - strand at 4354.611 kb on + strand at 4354.611 kb on + strand at 4354.611 kb on + strand at 4354.611 kb on + strand at 4354.705 kb on - strand at 4354.705 kb on - strand at 4354.741 kb on - strand at 4354.872 kb on + strand at 4354.909 kb on - strand at 4354.989 kb on + strand at 4354.989 kb on + strand at 4354.990 kb on - strand at 4354.990 kb on - strand at 4354.990 kb on - strand at 4355.008 kb on + strand at 4355.022 kb on + strand at 4355.023 kb on - strand at 4355.023 kb on - strand at 4355.024 kb on + strand at 4355.024 kb on + strand at 4355.024 kb on + strand at 4355.024 kb on + strand at 4355.025 kb on - strand at 4355.025 kb on - strand at 4355.041 kb on + strand at 4355.059 kb on + strand at 4355.076 kb on + strand at 4355.105 kb on + strand at 4355.106 kb on - strand at 4355.126 kb on + strand at 4355.126 kb on + strand at 4355.194 kb on + strand at 4355.243 kb on + strand at 4355.284 kb on + strand at 4355.308 kb on + strand at 4355.340 kb on + strand at 4355.341 kb on - strand at 4355.423 kb on + strand at 4355.423 kb on + strand at 4355.423 kb on + strand at 4355.423 kb on + strand at 4355.424 kb on - strand at 4355.424 kb on - strand at 4355.429 kb on - strand at 4355.484 kb on + strand at 4355.499 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Maltitol 20mM (C) remove 4,352,566 - +0.5 4,352,566 - -0.2 4,352,621 + Echvi_3664 0.16 -1.0 4,352,621 + Echvi_3664 0.16 -0.6 4,352,643 + Echvi_3664 0.19 -1.5 4,352,663 + Echvi_3664 0.21 +0.3 4,352,696 + Echvi_3664 0.25 +0.2 4,352,696 + Echvi_3664 0.25 +3.7 4,352,696 + Echvi_3664 0.25 -0.0 4,352,697 - Echvi_3664 0.25 +0.1 4,352,704 + Echvi_3664 0.26 +0.0 4,352,704 + Echvi_3664 0.26 -0.2 4,352,705 - Echvi_3664 0.26 -2.0 4,352,765 + Echvi_3664 0.33 +0.0 4,352,766 - Echvi_3664 0.33 -0.4 4,352,774 - Echvi_3664 0.34 -0.1 4,352,816 + Echvi_3664 0.40 -0.7 4,352,816 + Echvi_3664 0.40 -1.2 4,352,816 + Echvi_3664 0.40 -0.7 4,352,816 + Echvi_3664 0.40 -0.0 4,352,816 + Echvi_3664 0.40 +0.2 4,352,818 + Echvi_3664 0.40 -0.9 4,352,818 + Echvi_3664 0.40 +0.8 4,352,818 + Echvi_3664 0.40 +0.3 4,352,818 + Echvi_3664 0.40 +0.4 4,352,819 - Echvi_3664 0.40 +3.4 4,352,819 - Echvi_3664 0.40 +0.7 4,352,884 + Echvi_3664 0.48 +1.8 4,352,885 - Echvi_3664 0.48 -0.9 4,352,897 + Echvi_3664 0.49 -0.9 4,352,901 - Echvi_3664 0.50 -1.5 4,352,940 + Echvi_3664 0.55 -1.2 4,352,940 + Echvi_3664 0.55 +1.5 4,352,940 + Echvi_3664 0.55 -1.9 4,352,940 + Echvi_3664 0.55 +1.2 4,352,940 + Echvi_3664 0.55 +0.2 4,352,940 + Echvi_3664 0.55 +0.0 4,352,941 - Echvi_3664 0.55 +0.3 4,352,941 - Echvi_3664 0.55 -0.4 4,352,941 - Echvi_3664 0.55 -0.2 4,352,941 - Echvi_3664 0.55 -0.1 4,352,941 - Echvi_3664 0.55 +1.3 4,352,952 + Echvi_3664 0.56 -1.2 4,352,952 + Echvi_3664 0.56 +0.8 4,352,973 + Echvi_3664 0.59 -1.5 4,353,056 + Echvi_3664 0.69 +0.0 4,353,059 + Echvi_3664 0.69 -1.4 4,353,059 + Echvi_3664 0.69 +1.0 4,353,060 - Echvi_3664 0.69 -0.2 4,353,060 - Echvi_3664 0.69 +1.1 4,353,189 + Echvi_3664 0.85 -1.3 4,353,189 + Echvi_3664 0.85 +0.8 4,353,190 - Echvi_3664 0.85 -0.9 4,353,190 - Echvi_3664 0.85 +0.3 4,353,210 + Echvi_3664 0.87 -1.0 4,353,282 + -1.1 4,353,282 + -0.6 4,353,282 + +0.6 4,353,304 - -2.0 4,353,368 - +2.3 4,353,416 + -0.4 4,353,439 + -0.2 4,353,493 + +1.1 4,353,550 + +0.5 4,353,583 + +0.9 4,353,585 + -0.5 4,353,586 - -0.4 4,353,597 + +0.3 4,353,639 - +0.2 4,353,639 - +0.2 4,353,656 - Echvi_3665 0.10 +0.5 4,353,656 - Echvi_3665 0.10 +4.0 4,353,660 + Echvi_3665 0.11 +0.8 4,353,660 + Echvi_3665 0.11 +1.5 4,353,661 - Echvi_3665 0.11 +0.2 4,353,668 + Echvi_3665 0.12 +0.4 4,353,668 + Echvi_3665 0.12 -0.4 4,353,669 - Echvi_3665 0.12 +0.0 4,353,669 - Echvi_3665 0.12 +1.0 4,353,733 - Echvi_3665 0.18 +0.1 4,353,767 - Echvi_3665 0.22 +0.3 4,353,833 - Echvi_3665 0.29 +2.1 4,353,840 - Echvi_3665 0.29 -0.6 4,353,961 + Echvi_3665 0.42 +0.5 4,353,962 - Echvi_3665 0.42 -1.2 4,353,962 - Echvi_3665 0.42 +0.3 4,353,962 - Echvi_3665 0.42 -0.3 4,353,962 - Echvi_3665 0.42 -0.8 4,353,962 - Echvi_3665 0.42 +1.1 4,353,994 + Echvi_3665 0.45 -2.0 4,353,999 + Echvi_3665 0.46 +0.8 4,353,999 + Echvi_3665 0.46 -0.1 4,353,999 + Echvi_3665 0.46 -0.2 4,354,000 - Echvi_3665 0.46 +2.4 4,354,000 - Echvi_3665 0.46 +2.4 4,354,001 + Echvi_3665 0.46 -0.5 4,354,002 - Echvi_3665 0.46 -0.2 4,354,002 - Echvi_3665 0.46 +0.4 4,354,010 - Echvi_3665 0.47 +0.2 4,354,032 + Echvi_3665 0.49 +2.0 4,354,033 - Echvi_3665 0.49 +0.3 4,354,125 + Echvi_3665 0.59 -0.7 4,354,125 + Echvi_3665 0.59 -0.9 4,354,126 - Echvi_3665 0.59 -0.1 4,354,126 - Echvi_3665 0.59 +1.0 4,354,135 + Echvi_3665 0.60 +0.8 4,354,135 + Echvi_3665 0.60 +1.2 4,354,135 + Echvi_3665 0.60 +0.5 4,354,136 - Echvi_3665 0.60 +0.4 4,354,211 + Echvi_3665 0.68 +0.6 4,354,211 + Echvi_3665 0.68 -0.2 4,354,211 + Echvi_3665 0.68 -0.6 4,354,212 - Echvi_3665 0.68 +0.8 4,354,361 + Echvi_3665 0.83 -0.2 4,354,376 + Echvi_3665 0.85 +0.7 4,354,391 + Echvi_3665 0.86 +0.1 4,354,391 + Echvi_3665 0.86 +0.3 4,354,392 - Echvi_3665 0.86 +0.0 4,354,392 - Echvi_3665 0.86 -0.4 4,354,400 + Echvi_3665 0.87 +1.0 4,354,433 + +0.2 4,354,433 + +1.0 4,354,433 + +1.7 4,354,433 + +0.6 4,354,434 - -1.0 4,354,440 + -1.5 4,354,451 - -0.9 4,354,470 + +0.4 4,354,470 + +1.9 4,354,471 - -0.3 4,354,471 - +0.3 4,354,471 - +0.1 4,354,471 - +0.9 4,354,530 - -0.5 4,354,587 - +0.7 4,354,601 + +0.8 4,354,601 + +3.8 4,354,602 - -1.9 4,354,602 - +3.5 4,354,604 + +0.5 4,354,604 + +0.6 4,354,604 + -2.2 4,354,604 + -0.2 4,354,605 - +0.7 4,354,607 + -0.3 4,354,608 - +0.7 4,354,608 - +2.0 4,354,608 - -0.1 4,354,608 - -1.7 4,354,611 + +0.6 4,354,611 + +0.8 4,354,611 + +0.5 4,354,611 + -0.5 4,354,705 - +0.5 4,354,705 - -0.3 4,354,741 - +0.7 4,354,872 + -0.4 4,354,909 - +0.3 4,354,989 + -0.2 4,354,989 + -1.0 4,354,990 - +0.6 4,354,990 - -3.7 4,354,990 - -2.0 4,355,008 + +0.7 4,355,022 + +1.3 4,355,023 - +0.7 4,355,023 - +0.5 4,355,024 + +0.1 4,355,024 + -0.0 4,355,024 + +0.5 4,355,024 + -0.3 4,355,025 - +0.6 4,355,025 - +0.5 4,355,041 + -0.2 4,355,059 + +0.6 4,355,076 + +0.8 4,355,105 + +0.1 4,355,106 - -0.9 4,355,126 + +0.4 4,355,126 + -0.7 4,355,194 + -0.1 4,355,243 + -1.4 4,355,284 + -0.7 4,355,308 + -1.3 4,355,340 + +1.6 4,355,341 - -0.1 4,355,423 + +0.1 4,355,423 + -0.1 4,355,423 + +0.2 4,355,423 + +1.8 4,355,424 - +0.8 4,355,424 - -0.2 4,355,429 - +1.2 4,355,484 + -1.0 4,355,499 - +0.9
Or see this region's nucleotide sequence