Experiment: Maltitol 20mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2093 and Echvi_2094 are separated by 59 nucleotides
Echvi_2093: Echvi_2093 - Ribosomal protein S1, at 2,469,982 to 2,471,760
_2093
Echvi_2094: Echvi_2094 - Uncharacterized conserved protein, at 2,471,820 to 2,472,686
_2094
Position (kb)
2471
2472
2473 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2471.843 kb on + strand at 2471.878 kb on + strand at 2471.930 kb on - strand, within Echvi_2094 at 2472.131 kb on - strand, within Echvi_2094 at 2472.192 kb on + strand, within Echvi_2094 at 2472.213 kb on + strand, within Echvi_2094 at 2472.216 kb on - strand, within Echvi_2094 at 2472.451 kb on + strand, within Echvi_2094 at 2472.452 kb on - strand, within Echvi_2094 at 2472.452 kb on - strand, within Echvi_2094 at 2472.493 kb on + strand, within Echvi_2094 at 2472.494 kb on - strand, within Echvi_2094 at 2472.496 kb on + strand, within Echvi_2094 at 2472.571 kb on + strand, within Echvi_2094 at 2472.572 kb on - strand, within Echvi_2094 at 2472.572 kb on - strand, within Echvi_2094 at 2472.611 kb on + strand at 2472.640 kb on - strand at 2472.670 kb on - strand at 2472.716 kb on - strand at 2472.718 kb on - strand at 2472.718 kb on - strand at 2472.829 kb on - strand at 2472.829 kb on - strand at 2472.836 kb on + strand at 2472.875 kb on + strand at 2472.876 kb on - strand at 2472.879 kb on + strand at 2472.879 kb on + strand at 2472.879 kb on + strand at 2472.880 kb on - strand at 2472.880 kb on - strand at 2472.880 kb on - strand at 2472.915 kb on + strand at 2472.941 kb on - strand at 2472.958 kb on - strand at 2473.001 kb on - strand at 2473.054 kb on - strand at 2473.065 kb on + strand at 2473.065 kb on + strand at 2473.069 kb on + strand at 2473.069 kb on + strand at 2473.069 kb on + strand at 2473.070 kb on - strand at 2473.070 kb on - strand at 2473.128 kb on + strand at 2473.128 kb on + strand at 2473.193 kb on + strand at 2473.194 kb on - strand at 2473.324 kb on + strand at 2473.357 kb on - strand at 2473.506 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Maltitol 20mM (C) remove 2,471,843 + +0.6 2,471,878 + +1.6 2,471,930 - Echvi_2094 0.13 -0.1 2,472,131 - Echvi_2094 0.36 -4.1 2,472,192 + Echvi_2094 0.43 +0.9 2,472,213 + Echvi_2094 0.45 +0.1 2,472,216 - Echvi_2094 0.46 -1.9 2,472,451 + Echvi_2094 0.73 +1.2 2,472,452 - Echvi_2094 0.73 +0.5 2,472,452 - Echvi_2094 0.73 +0.7 2,472,493 + Echvi_2094 0.78 -0.5 2,472,494 - Echvi_2094 0.78 +0.4 2,472,496 + Echvi_2094 0.78 +0.5 2,472,571 + Echvi_2094 0.87 +0.8 2,472,572 - Echvi_2094 0.87 +0.7 2,472,572 - Echvi_2094 0.87 +0.1 2,472,611 + -1.1 2,472,640 - -0.3 2,472,670 - -0.4 2,472,716 - +0.7 2,472,718 - -0.3 2,472,718 - -0.8 2,472,829 - +0.6 2,472,829 - -0.6 2,472,836 + -0.6 2,472,875 + +0.5 2,472,876 - +0.6 2,472,879 + +1.0 2,472,879 + +0.4 2,472,879 + -0.7 2,472,880 - -0.1 2,472,880 - +0.6 2,472,880 - -1.9 2,472,915 + -0.7 2,472,941 - +1.6 2,472,958 - +1.0 2,473,001 - -1.4 2,473,054 - -0.7 2,473,065 + -0.8 2,473,065 + -0.3 2,473,069 + -0.2 2,473,069 + +0.0 2,473,069 + +1.1 2,473,070 - -0.3 2,473,070 - +0.5 2,473,128 + +1.0 2,473,128 + -0.7 2,473,193 + +2.0 2,473,194 - -1.0 2,473,324 + -0.1 2,473,357 - -1.0 2,473,506 + -0.6
Or see this region's nucleotide sequence