Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2094

Experiment: Maltitol 20mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEchvi_2093 and Echvi_2094 are separated by 59 nucleotides Echvi_2093: Echvi_2093 - Ribosomal protein S1, at 2,469,982 to 2,471,760 _2093 Echvi_2094: Echvi_2094 - Uncharacterized conserved protein, at 2,471,820 to 2,472,686 _2094 Position (kb) 2471 2472 2473Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 2471.843 kb on + strandat 2471.878 kb on + strandat 2471.930 kb on - strand, within Echvi_2094at 2472.131 kb on - strand, within Echvi_2094at 2472.192 kb on + strand, within Echvi_2094at 2472.213 kb on + strand, within Echvi_2094at 2472.216 kb on - strand, within Echvi_2094at 2472.451 kb on + strand, within Echvi_2094at 2472.452 kb on - strand, within Echvi_2094at 2472.452 kb on - strand, within Echvi_2094at 2472.493 kb on + strand, within Echvi_2094at 2472.494 kb on - strand, within Echvi_2094at 2472.496 kb on + strand, within Echvi_2094at 2472.571 kb on + strand, within Echvi_2094at 2472.572 kb on - strand, within Echvi_2094at 2472.572 kb on - strand, within Echvi_2094at 2472.611 kb on + strandat 2472.640 kb on - strandat 2472.670 kb on - strandat 2472.716 kb on - strandat 2472.718 kb on - strandat 2472.718 kb on - strandat 2472.829 kb on - strandat 2472.829 kb on - strandat 2472.836 kb on + strandat 2472.875 kb on + strandat 2472.876 kb on - strandat 2472.879 kb on + strandat 2472.879 kb on + strandat 2472.879 kb on + strandat 2472.880 kb on - strandat 2472.880 kb on - strandat 2472.880 kb on - strandat 2472.915 kb on + strandat 2472.941 kb on - strandat 2472.958 kb on - strandat 2473.001 kb on - strandat 2473.054 kb on - strandat 2473.065 kb on + strandat 2473.065 kb on + strandat 2473.069 kb on + strandat 2473.069 kb on + strandat 2473.069 kb on + strandat 2473.070 kb on - strandat 2473.070 kb on - strandat 2473.128 kb on + strandat 2473.128 kb on + strandat 2473.193 kb on + strandat 2473.194 kb on - strandat 2473.324 kb on + strandat 2473.357 kb on - strandat 2473.506 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Maltitol 20mM (C)
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2,471,843 + +0.6
2,471,878 + +1.6
2,471,930 - Echvi_2094 0.13 -0.1
2,472,131 - Echvi_2094 0.36 -4.1
2,472,192 + Echvi_2094 0.43 +0.9
2,472,213 + Echvi_2094 0.45 +0.1
2,472,216 - Echvi_2094 0.46 -1.9
2,472,451 + Echvi_2094 0.73 +1.2
2,472,452 - Echvi_2094 0.73 +0.5
2,472,452 - Echvi_2094 0.73 +0.7
2,472,493 + Echvi_2094 0.78 -0.5
2,472,494 - Echvi_2094 0.78 +0.4
2,472,496 + Echvi_2094 0.78 +0.5
2,472,571 + Echvi_2094 0.87 +0.8
2,472,572 - Echvi_2094 0.87 +0.7
2,472,572 - Echvi_2094 0.87 +0.1
2,472,611 + -1.1
2,472,640 - -0.3
2,472,670 - -0.4
2,472,716 - +0.7
2,472,718 - -0.3
2,472,718 - -0.8
2,472,829 - +0.6
2,472,829 - -0.6
2,472,836 + -0.6
2,472,875 + +0.5
2,472,876 - +0.6
2,472,879 + +1.0
2,472,879 + +0.4
2,472,879 + -0.7
2,472,880 - -0.1
2,472,880 - +0.6
2,472,880 - -1.9
2,472,915 + -0.7
2,472,941 - +1.6
2,472,958 - +1.0
2,473,001 - -1.4
2,473,054 - -0.7
2,473,065 + -0.8
2,473,065 + -0.3
2,473,069 + -0.2
2,473,069 + +0.0
2,473,069 + +1.1
2,473,070 - -0.3
2,473,070 - +0.5
2,473,128 + +1.0
2,473,128 + -0.7
2,473,193 + +2.0
2,473,194 - -1.0
2,473,324 + -0.1
2,473,357 - -1.0
2,473,506 + -0.6

Or see this region's nucleotide sequence